Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is hppA
Identifier: 159184648
GI number: 159184648
Start: 1167264
End: 1169402
Strand: Direct
Name: hppA
Synonym: Atu1174
Alternate gene names: 159184648
Gene position: 1167264-1169402 (Clockwise)
Preceding gene: 15888510
Following gene: 159184650
Centisome position: 41.08
GC content: 61.34
Gene sequence:
>2139_bases ATGACCGTAATACCCATAGTAATTTTATGCGGTGTCCTGTCCGTGGTTTACGCGGTATGGACCACCAAGAGTGTTCTCGA TGCCGATCAGGGCAACGAGCGTATGCGTGAAATAGCAGGTTATATCCGTGAAGGCGCACAGGCTTATCTCACCCGTCAAT ATCTCACCATCGCCATCGTCGGACTGATCGTCGCCGTTCTCGCCTGGTATCTGCTGTCGGCCATCGCGGCCATCGGTTTC GTTATCGGTGCGGTATTGTCCGGCGTCGCCGGTTTCGTCGGCATGCATGTTTCCGTGCGTGCCAATCTGCGCACCGCGCA GGCAGCATCTCACAGCCTTGGTGCCGGTCTCGATATCGCCTTCAAGTCGGGCGCCATTACCGGCATGCTGGTTGCCGGCC TCGCGCTGCTTGGCGTTTCAATCTATTATTTTGTTCTGACGTCCGTCCTTGGCCATCCGCCCGGATCACGCGCCGTTATC GACGCGTTGGTGTCGCTCGGTTTCGGCGCTTCGCTGATCTCCATCTTCGCCCGTCTCGGCGGCGGTATCTTCACCAAGGG TGCGGATGTCGGCGGCGATCTCGTCGGCAAGGTGGAGGCGGGCATTCCCGAGGATGATCCGCGCAACCCCGCAACCATTG CCGACAATGTCGGCGATAACGTCGGTGACTGCGCCGGCATGGCGGCTGACCTGTTCGAAACCTATGCCGTCTCCGTGGTC GCGACCATGGTTCTCGCCGCGATCTTCTTTGCGGGAACGCCGATTCTGGAAAGCGCCATGGTCTATCCGCTGGCGATCTG CGGCGCCTGCATCCTGACCTCGATTGCCGGTACCTTCTTCGTGAAGCTCGGCACCAACAATTCCATCATGGGCGCGCTCT ACAAGGGGCTCATCGCCACTGGCGTGTTCTCAGTCGCCGGCCTTGCCGTGGCAACCTATGCCACGGTCGGCTGGGGAACG ATCGGCACGGTGGCCGGCATGGAGATCACCGGCACCAACCTCTTCTTCTGCGGATTGGTTGGCCTCGTCGTGACGGCGCT GATCGTCGTCATCACCGAATATTATACCGGCACCAACAAGCGGCCGGTCAATTCCATCGCCCAAGCATCGGTTACCGGCC ACGGCACCAACGTCATTCAGGGCCTTGCGGTCTCGCTGGAATCGACCGCGCTGCCGGCCATCGTCATCGTCGGCGGTATC ATCGGCACCTACCAGCTCGGCGGCCTGTTCGGCACCGGCATCGCCGTTACCGCCATGCTCGGGCTGGCGGGCATGATCGT CGCGCTCGACGCCTTCGGCCCGGTCACGGACAATGCCGGCGGCATCGCCGAAATGGCGGGTCTCGATCCTGATGTGCGCA AGGCGACCGACGCGCTGGATGCCGTTGGCAACACCACCAAGGCGGTGACCAAGGGTTACGCCATCGGTTCGGCCGGTCTC GGCGCATTGGTGCTGTTTGCGGCCTATGCCAACGACCTGTCCTATTTCGCCGCCAATGGCGATACCTATCCTTACTTCAA GGATATCGGAGAAATCTCCTTCAGCCTCGCCAATCCTTACGTGGTTGCCGGTCTGCTGTTCGGCGGTCTCATCCCCTACC TCTTCGGCGGCATCGCCATGACGGCGGTGGGTAAGGCGGCAAGCGCCATCGTTGAGGAAGTCCGCCGCCAGTTCCGCGAA AAGCCCGGCATCATGGCCGGCACGGAAAAGCCTGACTACGGCAGGGCCGTGGACCTGCTGACCAAGGCGGCAATCAGGGA AATGGTCATCCCGTCGCTTCTGCCGGTTCTCGCGCCGCTCGTGGTTTATTTCGGCGTGCTGCTGATCTCGGGCTCAAAGG CGTCCGCCTTTGCCGCGCTGGGTGCATCCTTGCTGGGTGTCATCATCAACGGGCTGTTCGTGGCAATTTCCATGACGTCG GGTGGTGGCGCCTGGGACAACGCCAAGAAGAGCTTCGAAGATGGCTTCATCGACAAGGACGGGGTACGCCACGTCAAAGG TTCCGAGGCGCACAAGGCATCGGTAACGGGCGACACGGTCGGCGATCCCTACAAGGATACCGCGGGTCCAGCCGTCAACC CGGCCATCAAGATCACCAATATCGTGGCGCTGCTGCTGCTGGCAGTTCTTGCCCACTGA
Upstream 100 bases:
>100_bases CCAAGACAGGACCCGGCGTGCGTTTCATCGCCTGGTCCTTGCACATGGTTCGCCACGCCGGGGAGGGAGTGAGACCCGGC CTTTTGGGAGGTAAGTGCGC
Downstream 100 bases:
>100_bases AGGCTACGGTTCCGACAAATGAAAAGGCCCGGGGAGCGATCCCCGGGCCTTCGAACTTTCCGTTCCTGCTGCGGTCAGGG GGCGTTGTTGCCGCCCTGGC
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound proton-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; H(+)-PPase
Number of amino acids: Translated: 712; Mature: 711
Protein sequence:
>712_residues MTVIPIVILCGVLSVVYAVWTTKSVLDADQGNERMREIAGYIREGAQAYLTRQYLTIAIVGLIVAVLAWYLLSAIAAIGF VIGAVLSGVAGFVGMHVSVRANLRTAQAASHSLGAGLDIAFKSGAITGMLVAGLALLGVSIYYFVLTSVLGHPPGSRAVI DALVSLGFGASLISIFARLGGGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVGDNVGDCAGMAADLFETYAVSVV ATMVLAAIFFAGTPILESAMVYPLAICGACILTSIAGTFFVKLGTNNSIMGALYKGLIATGVFSVAGLAVATYATVGWGT IGTVAGMEITGTNLFFCGLVGLVVTALIVVITEYYTGTNKRPVNSIAQASVTGHGTNVIQGLAVSLESTALPAIVIVGGI IGTYQLGGLFGTGIAVTAMLGLAGMIVALDAFGPVTDNAGGIAEMAGLDPDVRKATDALDAVGNTTKAVTKGYAIGSAGL GALVLFAAYANDLSYFAANGDTYPYFKDIGEISFSLANPYVVAGLLFGGLIPYLFGGIAMTAVGKAASAIVEEVRRQFRE KPGIMAGTEKPDYGRAVDLLTKAAIREMVIPSLLPVLAPLVVYFGVLLISGSKASAFAALGASLLGVIINGLFVAISMTS GGGAWDNAKKSFEDGFIDKDGVRHVKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAVLAH
Sequences:
>Translated_712_residues MTVIPIVILCGVLSVVYAVWTTKSVLDADQGNERMREIAGYIREGAQAYLTRQYLTIAIVGLIVAVLAWYLLSAIAAIGF VIGAVLSGVAGFVGMHVSVRANLRTAQAASHSLGAGLDIAFKSGAITGMLVAGLALLGVSIYYFVLTSVLGHPPGSRAVI DALVSLGFGASLISIFARLGGGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVGDNVGDCAGMAADLFETYAVSVV ATMVLAAIFFAGTPILESAMVYPLAICGACILTSIAGTFFVKLGTNNSIMGALYKGLIATGVFSVAGLAVATYATVGWGT IGTVAGMEITGTNLFFCGLVGLVVTALIVVITEYYTGTNKRPVNSIAQASVTGHGTNVIQGLAVSLESTALPAIVIVGGI IGTYQLGGLFGTGIAVTAMLGLAGMIVALDAFGPVTDNAGGIAEMAGLDPDVRKATDALDAVGNTTKAVTKGYAIGSAGL GALVLFAAYANDLSYFAANGDTYPYFKDIGEISFSLANPYVVAGLLFGGLIPYLFGGIAMTAVGKAASAIVEEVRRQFRE KPGIMAGTEKPDYGRAVDLLTKAAIREMVIPSLLPVLAPLVVYFGVLLISGSKASAFAALGASLLGVIINGLFVAISMTS GGGAWDNAKKSFEDGFIDKDGVRHVKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAVLAH >Mature_711_residues TVIPIVILCGVLSVVYAVWTTKSVLDADQGNERMREIAGYIREGAQAYLTRQYLTIAIVGLIVAVLAWYLLSAIAAIGFV IGAVLSGVAGFVGMHVSVRANLRTAQAASHSLGAGLDIAFKSGAITGMLVAGLALLGVSIYYFVLTSVLGHPPGSRAVID ALVSLGFGASLISIFARLGGGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVGDNVGDCAGMAADLFETYAVSVVA TMVLAAIFFAGTPILESAMVYPLAICGACILTSIAGTFFVKLGTNNSIMGALYKGLIATGVFSVAGLAVATYATVGWGTI GTVAGMEITGTNLFFCGLVGLVVTALIVVITEYYTGTNKRPVNSIAQASVTGHGTNVIQGLAVSLESTALPAIVIVGGII GTYQLGGLFGTGIAVTAMLGLAGMIVALDAFGPVTDNAGGIAEMAGLDPDVRKATDALDAVGNTTKAVTKGYAIGSAGLG ALVLFAAYANDLSYFAANGDTYPYFKDIGEISFSLANPYVVAGLLFGGLIPYLFGGIAMTAVGKAASAIVEEVRRQFREK PGIMAGTEKPDYGRAVDLLTKAAIREMVIPSLLPVLAPLVVYFGVLLISGSKASAFAALGASLLGVIINGLFVAISMTSG GGAWDNAKKSFEDGFIDKDGVRHVKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAVLAH
Specific function: Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Acidocalcisome membrane; Multi-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-insensitive subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HPPA_AGRT5 (Q8UG67)
Other databases:
- EMBL: AE007869 - EMBL: AF417520 - EMBL: AF417521 - EMBL: AJ251784 - PIR: AD2721 - PIR: H97502 - RefSeq: NP_354192.2 - STRING: Q8UG67 - GeneID: 1133212 - GenomeReviews: AE007869_GR - KEGG: atu:Atu1174 - eggNOG: COG3808 - HOGENOM: HBG593668 - OMA: AYLARQY - ProtClustDB: PRK00733 - BioCyc: ATUM176299-1:ATU1174-MONOMER - HAMAP: MF_01129 - InterPro: IPR004131 - PIRSF: PIRSF001265 - TIGRFAMs: TIGR01104
Pfam domain/function: PF03030 H_PPase
EC number: =3.6.1.1
Molecular weight: Translated: 72505; Mature: 72374
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe16ac64)-; HASH(0xe55b394)-; HASH(0xe3745d4)-; HASH(0xe55b43c)-; HASH(0xb356418)-; HASH(0xe54b438)-; HASH(0xe2efd88)-; HASH(0xd3ca9c4)-; HASH(0xe409168)-; HASH(0xb67ac70)-; HASH(0xb93d174)-; HASH(0xb5b20a8)-; HASH(0xdec1f38)-; HASH(0xd538cb4)-; HASH(0xc0eb70c)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVIPIVILCGVLSVVYAVWTTKSVLDADQGNERMREIAGYIREGAQAYLTRQYLTIAIV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLIVAVLAWYLLSAIAAIGFVIGAVLSGVAGFVGMHVSVRANLRTAQAASHSLGAGLDIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCCEEE FKSGAITGMLVAGLALLGVSIYYFVLTSVLGHPPGSRAVIDALVSLGFGASLISIFARLG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHC GGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVGDNVGDCAGMAADLFETYAVSVV CCEEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH ATMVLAAIFFAGTPILESAMVYPLAICGACILTSIAGTFFVKLGTNNSIMGALYKGLIAT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHH GVFSVAGLAVATYATVGWGTIGTVAGMEITGTNLFFCGLVGLVVTALIVVITEYYTGTNK HHHHHHHHHHHHHHHHCCCHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC RPVNSIAQASVTGHGTNVIQGLAVSLESTALPAIVIVGGIIGTYQLGGLFGTGIAVTAML CCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GLAGMIVALDAFGPVTDNAGGIAEMAGLDPDVRKATDALDAVGNTTKAVTKGYAIGSAGL HHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHH GALVLFAAYANDLSYFAANGDTYPYFKDIGEISFSLANPYVVAGLLFGGLIPYLFGGIAM HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH TAVGKAASAIVEEVRRQFREKPGIMAGTEKPDYGRAVDLLTKAAIREMVIPSLLPVLAPL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VVYFGVLLISGSKASAFAALGASLLGVIINGLFVAISMTSGGGAWDNAKKSFEDGFIDKD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHCCCCCCC GVRHVKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAVLAH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCH >Mature Secondary Structure TVIPIVILCGVLSVVYAVWTTKSVLDADQGNERMREIAGYIREGAQAYLTRQYLTIAIV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLIVAVLAWYLLSAIAAIGFVIGAVLSGVAGFVGMHVSVRANLRTAQAASHSLGAGLDIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCCEEE FKSGAITGMLVAGLALLGVSIYYFVLTSVLGHPPGSRAVIDALVSLGFGASLISIFARLG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHC GGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVGDNVGDCAGMAADLFETYAVSVV CCEEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH ATMVLAAIFFAGTPILESAMVYPLAICGACILTSIAGTFFVKLGTNNSIMGALYKGLIAT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHH GVFSVAGLAVATYATVGWGTIGTVAGMEITGTNLFFCGLVGLVVTALIVVITEYYTGTNK HHHHHHHHHHHHHHHHCCCHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC RPVNSIAQASVTGHGTNVIQGLAVSLESTALPAIVIVGGIIGTYQLGGLFGTGIAVTAML CCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GLAGMIVALDAFGPVTDNAGGIAEMAGLDPDVRKATDALDAVGNTTKAVTKGYAIGSAGL HHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHH GALVLFAAYANDLSYFAANGDTYPYFKDIGEISFSLANPYVVAGLLFGGLIPYLFGGIAM HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH TAVGKAASAIVEEVRRQFREKPGIMAGTEKPDYGRAVDLLTKAAIREMVIPSLLPVLAPL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VVYFGVLLISGSKASAFAALGASLLGVIINGLFVAISMTSGGGAWDNAKKSFEDGFIDKD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHCCCCCCC GVRHVKGSEAHKASVTGDTVGDPYKDTAGPAVNPAIKITNIVALLLLAVLAH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194; 12783865