Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is sbp [H]
Identifier: 159184478
GI number: 159184478
Start: 818166
End: 819191
Strand: Direct
Name: sbp [H]
Synonym: Atu0820
Alternate gene names: 159184478
Gene position: 818166-819191 (Clockwise)
Preceding gene: 159184477
Following gene: 159184479
Centisome position: 28.79
GC content: 60.14
Gene sequence:
>1026_bases ATGTCCAAACTTCTGTCCGGTTTGAGCGCTGTCGCTCTCGGCCTTTCACTGGCACTCGGCGGCGTTGGCTCGGCCGCCGC GCAGACCAAGCTGCTCAACGTGTCCTATGATCCGACCCGTGAACTCTACAAGGATTTCAACGAAGCCTTCGCCAAGAAGT GGAAGGCCGACACCGGTGAAGACCTCACCATCCAGCAGTCGCATGGCGGTTCCGGCAAGCAGGCGCGCTCGGTCATCGAC GGTCTGGAAGCGGATGTGGTCACGCTCGCATTGCAGAGCGATATCGACGCCATCGTCCAGAATTCCGGCAAGATCAACAA GGACTGGCGCACCCGTCTGCCGCACAATTCCTCGCCCTATACCTCGACCATCGTTTTCCTGGTGCGCAAGGGCAACCCCA AGGGTATCCATAACTGGGGCGATCTGGTGAAGGGCGATATCCAGATCGTCACGCCGAACCCGAAGACATCGGGCGGCGCG CGCTGGAATTATCTCGCCGCCTGGGCCTGGGCGAACGAAGAGTTCAAGGGCGATCAGGACAAGATCAAGGCCTATGTCGG TGATCTCTACAAGCGCGCCCCGGTTCTCGATACCGGCGCCCGTGGCTCCACCGTCACTTTCGCACAGCGCCAGATCGGTG ACGTGCTGCTGGCCTGGGAAAACGAAGCCTATCTCGCCGGTCAGGAATTCGGCGCTGACGCCTTCGATATCGTCGTGCCG CCGATCTCGATCCTCGCCGAACCGCCGGTCGCCGTGGTTGACGCCAACGTCGACGCCAAGGGCACCCGCAAGGCGGCGGA AGCCTATCTGCAATATCTCTATTCCGACGAGGGCCAGAATATTGCGGCGAAGCACTTCTATCGTCCGTCCAACCCTGCAG TCGTCTCCAAGGACCTGTTGAAGCAGCTGCCTGATATCAAGCTCGTTACCATCGACGATCCGATCTTCGGCGGTTGGGCC AAGGCGCAGCCAGAACATTTCGGTGACGGCGGCATCTTCGACCAGATTTACAAGCCCGCGAAGTAA
Upstream 100 bases:
>100_bases AAAACGCTCTCGGGAAACACTTTTTCGATCGTATTCGGCCTCATTGACCAACTCTACCGGTCCAGTAGAGTTAAACCATC GCAATCAGGAGGGAATACCG
Downstream 100 bases:
>100_bases GCGGATGATGGGGTGAAACGCGATCACCCCGTCCGCAGGGACAAGAGAAAAGAACCTGATCGACCGGACAATTGTTCCGG TCGATACTTTATAATAAACG
Product: ABC transporter, substrate binding protein (sulfate)
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSKLLSGLSAVALGLSLALGGVGSAAAQTKLLNVSYDPTRELYKDFNEAFAKKWKADTGEDLTIQQSHGGSGKQARSVID GLEADVVTLALQSDIDAIVQNSGKINKDWRTRLPHNSSPYTSTIVFLVRKGNPKGIHNWGDLVKGDIQIVTPNPKTSGGA RWNYLAAWAWANEEFKGDQDKIKAYVGDLYKRAPVLDTGARGSTVTFAQRQIGDVLLAWENEAYLAGQEFGADAFDIVVP PISILAEPPVAVVDANVDAKGTRKAAEAYLQYLYSDEGQNIAAKHFYRPSNPAVVSKDLLKQLPDIKLVTIDDPIFGGWA KAQPEHFGDGGIFDQIYKPAK
Sequences:
>Translated_341_residues MSKLLSGLSAVALGLSLALGGVGSAAAQTKLLNVSYDPTRELYKDFNEAFAKKWKADTGEDLTIQQSHGGSGKQARSVID GLEADVVTLALQSDIDAIVQNSGKINKDWRTRLPHNSSPYTSTIVFLVRKGNPKGIHNWGDLVKGDIQIVTPNPKTSGGA RWNYLAAWAWANEEFKGDQDKIKAYVGDLYKRAPVLDTGARGSTVTFAQRQIGDVLLAWENEAYLAGQEFGADAFDIVVP PISILAEPPVAVVDANVDAKGTRKAAEAYLQYLYSDEGQNIAAKHFYRPSNPAVVSKDLLKQLPDIKLVTIDDPIFGGWA KAQPEHFGDGGIFDQIYKPAK >Mature_340_residues SKLLSGLSAVALGLSLALGGVGSAAAQTKLLNVSYDPTRELYKDFNEAFAKKWKADTGEDLTIQQSHGGSGKQARSVIDG LEADVVTLALQSDIDAIVQNSGKINKDWRTRLPHNSSPYTSTIVFLVRKGNPKGIHNWGDLVKGDIQIVTPNPKTSGGAR WNYLAAWAWANEEFKGDQDKIKAYVGDLYKRAPVLDTGARGSTVTFAQRQIGDVLLAWENEAYLAGQEFGADAFDIVVPP ISILAEPPVAVVDANVDAKGTRKAAEAYLQYLYSDEGQNIAAKHFYRPSNPAVVSKDLLKQLPDIKLVTIDDPIFGGWAK AQPEHFGDGGIFDQIYKPAK
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=326, Percent_Identity=61.0429447852761, Blast_Score=400, Evalue=1e-113, Organism=Escherichia coli, GI1788765, Length=310, Percent_Identity=48.0645161290323, Blast_Score=292, Evalue=2e-80,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36944; Mature: 36813
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLLSGLSAVALGLSLALGGVGSAAAQTKLLNVSYDPTRELYKDFNEAFAKKWKADTGE CHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC DLTIQQSHGGSGKQARSVIDGLEADVVTLALQSDIDAIVQNSGKINKDWRTRLPHNSSPY CEEEECCCCCCCHHHHHHHCCCCHHHEEEEHHHHHHHHHHCCCCCCCCHHHCCCCCCCCC TSTIVFLVRKGNPKGIHNWGDLVKGDIQIVTPNPKTSGGARWNYLAAWAWANEEFKGDQD CEEEEEEEECCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCHH KIKAYVGDLYKRAPVLDTGARGSTVTFAQRQIGDVLLAWENEAYLAGQEFGADAFDIVVP HHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHCCEEEEECCCEEEECHHCCCCEEEEECC PISILAEPPVAVVDANVDAKGTRKAAEAYLQYLYSDEGQNIAAKHFYRPSNPAVVSKDLL CHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEECHHHH KQLPDIKLVTIDDPIFGGWAKAQPEHFGDGGIFDQIYKPAK HHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure SKLLSGLSAVALGLSLALGGVGSAAAQTKLLNVSYDPTRELYKDFNEAFAKKWKADTGE HHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC DLTIQQSHGGSGKQARSVIDGLEADVVTLALQSDIDAIVQNSGKINKDWRTRLPHNSSPY CEEEECCCCCCCHHHHHHHCCCCHHHEEEEHHHHHHHHHHCCCCCCCCHHHCCCCCCCCC TSTIVFLVRKGNPKGIHNWGDLVKGDIQIVTPNPKTSGGARWNYLAAWAWANEEFKGDQD CEEEEEEEECCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCHH KIKAYVGDLYKRAPVLDTGARGSTVTFAQRQIGDVLLAWENEAYLAGQEFGADAFDIVVP HHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHCCEEEEECCCEEEECHHCCCCEEEEECC PISILAEPPVAVVDANVDAKGTRKAAEAYLQYLYSDEGQNIAAKHFYRPSNPAVVSKDLL CHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEECHHHH KQLPDIKLVTIDDPIFGGWAKAQPEHFGDGGIFDQIYKPAK HHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]