Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is mviN [H]
Identifier: 159184270
GI number: 159184270
Start: 342473
End: 344062
Strand: Direct
Name: mviN [H]
Synonym: Atu0347
Alternate gene names: 159184270
Gene position: 342473-344062 (Clockwise)
Preceding gene: 159184269
Following gene: 15887699
Centisome position: 12.05
GC content: 60.06
Gene sequence:
>1590_bases ATGAGTCTGATCGGCAAGTTCGCCACCGTTGGCACCGCCACGCTCGGCAGCCGCATTTTTGGCTTTCTGCGCGAAACGCT GATGGCCGCTGCCGTCGGTACTGGTCCGGTGGCTGACGCCTTCAATGCCGCGTTCCGATTTCCCAACACCTTCCGGCGGC TTTTTGCCGAAGGCGCCTTTAACTCGGCTTTCGTGCCGCTTTTCGCCAAGGAAATCGAGGCGAACGGCATGGAGGGTGCA AGGCGCTTTTCCGAAGAGGTTTTCGGCGTTCTCTTCACCGTGCTTCTGGCCCTGACAATTTTGATGGAATTGTCGATGCC GTTCATCGTGCGCACGGTAATCGCGCCGGGCTTTCTGGAAGACCCGGTGAAGTTCGACAACACCGTCCGCCTCGCCACCA TCATGTTCCCTTATCTCGCCTGCATGTCGCTCGCGGCGATGATGGGCGGCATGCTGAATTCGCTGCACCGTTATTTTGCG GCGGCAATCGCACCTGTCTTCCTCAATATCATCCTCATCGGCGTGCTCGCCTTGGCATGGTGGAAGAATTACGATCCCCT GCAGGTGGGTTATGCGCTCTCGTGGGGGGTGATGGCAGCGGGTCTGGTGCAACTCGCCATCGTCTGGATCGCCGTGCGCA ACGCCGGCATGCGGATCGGTCTCCGTAGGCCGCGGCTAACGAAAAATGTGCAGCGGCTGCTGGTTCTTGCCCTGCCGGCG GCAATCACCGGCGGCATCACCCAGATCAACCTTCTGATCAACACCAATATTGCGTCAGCCGGCGAGGGCGTGATCTCCTC GCTTGCTTATGCCGACCGGATTTACCAGCTGCCGCTGGGCGTTGTCGGCATTGCCGTGGCCACCGTGCTTTTGCCGGAAC TTGCACGCGCTTTGCGCGGCGGGCACATGGTGGAGGCGGGAAGTCTGCAGAACCGCTCGGTCGAATTCGTATTATTCCTG ACCTTGCCTGCGGCGGCGGCTCTTCTTGTCATGGCCGAGCCCATCGTTCGTTTTCTTTATGAACGCGGCAACTTCTCACC TTCGGCTACCATCACCGTCGCGCAGATCCTCGGTATCTATGGTCTGGGTTTGCCGGCTTTCGTGCTGATCAAGGCCTTCA TTCCGGGCTTTTTCGCCCGCGAGGACACGCGCACGCCGATGATCTTCGCGGCGGTTTCCGTGGTTGTGAATGTCTCCCTG GCACTGACGCTGTTTCCGCGTCTCGGCGGCCCAGGCATTGCGATTGCCGAGATCACTGCCGGCTGGGTCAATGCCGCCTT GCTGTTCGGCATGCTTTTGTGGCGCGGTCACTGGCATGTGGATATTCCGCTGCTGACCCGCATTCCGCGTCTGCTTCTGG CCGCGGCTCTGATGGCCGGTTTTGTGCATTATGCGCTGACCTGGCTGAGTTTCGAGCTGTCGTCGGCCTCGTCCATCTTC GTCCGGGCAGGAACCATCATGGGCCTCGTCTTTACGGCCATGCTGGTCTATTTCGTGCTGGCTTTCGTTTCTGGCGGTGC CGATATCGGCATGGTCAAGAGAGCCGTGCGCAAGCGCGGTAAAAAGACCGCCGAGACGGAGGTGGGCTGA
Upstream 100 bases:
>100_bases CAGGAAGACGAATTGCGTGACCGCATGCCGAACGGCATCATCGCCCATCCAGACGTGGCGGCGCTGCCGGCCGCGCGCAC GGCAAAGGCTTGATATCCCC
Downstream 100 bases:
>100_bases TGTCCTTTTCTGAAAACCGCCGCATCGCGCTGGTCACGCTTGTCGTGGATAACTATGATCGGGCAAAGGCGTTTTACTGC GATGTTCTCGGCTTCGAGTG
Product: virulence factor MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MSLIGKFATVGTATLGSRIFGFLRETLMAAAVGTGPVADAFNAAFRFPNTFRRLFAEGAFNSAFVPLFAKEIEANGMEGA RRFSEEVFGVLFTVLLALTILMELSMPFIVRTVIAPGFLEDPVKFDNTVRLATIMFPYLACMSLAAMMGGMLNSLHRYFA AAIAPVFLNIILIGVLALAWWKNYDPLQVGYALSWGVMAAGLVQLAIVWIAVRNAGMRIGLRRPRLTKNVQRLLVLALPA AITGGITQINLLINTNIASAGEGVISSLAYADRIYQLPLGVVGIAVATVLLPELARALRGGHMVEAGSLQNRSVEFVLFL TLPAAAALLVMAEPIVRFLYERGNFSPSATITVAQILGIYGLGLPAFVLIKAFIPGFFAREDTRTPMIFAAVSVVVNVSL ALTLFPRLGGPGIAIAEITAGWVNAALLFGMLLWRGHWHVDIPLLTRIPRLLLAAALMAGFVHYALTWLSFELSSASSIF VRAGTIMGLVFTAMLVYFVLAFVSGGADIGMVKRAVRKRGKKTAETEVG
Sequences:
>Translated_529_residues MSLIGKFATVGTATLGSRIFGFLRETLMAAAVGTGPVADAFNAAFRFPNTFRRLFAEGAFNSAFVPLFAKEIEANGMEGA RRFSEEVFGVLFTVLLALTILMELSMPFIVRTVIAPGFLEDPVKFDNTVRLATIMFPYLACMSLAAMMGGMLNSLHRYFA AAIAPVFLNIILIGVLALAWWKNYDPLQVGYALSWGVMAAGLVQLAIVWIAVRNAGMRIGLRRPRLTKNVQRLLVLALPA AITGGITQINLLINTNIASAGEGVISSLAYADRIYQLPLGVVGIAVATVLLPELARALRGGHMVEAGSLQNRSVEFVLFL TLPAAAALLVMAEPIVRFLYERGNFSPSATITVAQILGIYGLGLPAFVLIKAFIPGFFAREDTRTPMIFAAVSVVVNVSL ALTLFPRLGGPGIAIAEITAGWVNAALLFGMLLWRGHWHVDIPLLTRIPRLLLAAALMAGFVHYALTWLSFELSSASSIF VRAGTIMGLVFTAMLVYFVLAFVSGGADIGMVKRAVRKRGKKTAETEVG >Mature_528_residues SLIGKFATVGTATLGSRIFGFLRETLMAAAVGTGPVADAFNAAFRFPNTFRRLFAEGAFNSAFVPLFAKEIEANGMEGAR RFSEEVFGVLFTVLLALTILMELSMPFIVRTVIAPGFLEDPVKFDNTVRLATIMFPYLACMSLAAMMGGMLNSLHRYFAA AIAPVFLNIILIGVLALAWWKNYDPLQVGYALSWGVMAAGLVQLAIVWIAVRNAGMRIGLRRPRLTKNVQRLLVLALPAA ITGGITQINLLINTNIASAGEGVISSLAYADRIYQLPLGVVGIAVATVLLPELARALRGGHMVEAGSLQNRSVEFVLFLT LPAAAALLVMAEPIVRFLYERGNFSPSATITVAQILGIYGLGLPAFVLIKAFIPGFFAREDTRTPMIFAAVSVVVNVSLA LTLFPRLGGPGIAIAEITAGWVNAALLFGMLLWRGHWHVDIPLLTRIPRLLLAAALMAGFVHYALTWLSFELSSASSIFV RAGTIMGLVFTAMLVYFVLAFVSGGADIGMVKRAVRKRGKKTAETEVG
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=433, Percent_Identity=33.9491916859122, Blast_Score=233, Evalue=2e-62,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 56892; Mature: 56760
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIGKFATVGTATLGSRIFGFLRETLMAAAVGTGPVADAFNAAFRFPNTFRRLFAEGAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCC NSAFVPLFAKEIEANGMEGARRFSEEVFGVLFTVLLALTILMELSMPFIVRTVIAPGFLE CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC DPVKFDNTVRLATIMFPYLACMSLAAMMGGMLNSLHRYFAAAIAPVFLNIILIGVLALAW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WKNYDPLQVGYALSWGVMAAGLVQLAIVWIAVRNAGMRIGLRRPRLTKNVQRLLVLALPA HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHH AITGGITQINLLINTNIASAGEGVISSLAYADRIYQLPLGVVGIAVATVLLPELARALRG HHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GHMVEAGSLQNRSVEFVLFLTLPAAAALLVMAEPIVRFLYERGNFSPSATITVAQILGIY CCEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GLGLPAFVLIKAFIPGFFAREDTRTPMIFAAVSVVVNVSLALTLFPRLGGPGIAIAEITA HCCHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH GWVNAALLFGMLLWRGHWHVDIPLLTRIPRLLLAAALMAGFVHYALTWLSFELSSASSIF HHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VRAGTIMGLVFTAMLVYFVLAFVSGGADIGMVKRAVRKRGKKTAETEVG HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SLIGKFATVGTATLGSRIFGFLRETLMAAAVGTGPVADAFNAAFRFPNTFRRLFAEGAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCC NSAFVPLFAKEIEANGMEGARRFSEEVFGVLFTVLLALTILMELSMPFIVRTVIAPGFLE CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC DPVKFDNTVRLATIMFPYLACMSLAAMMGGMLNSLHRYFAAAIAPVFLNIILIGVLALAW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WKNYDPLQVGYALSWGVMAAGLVQLAIVWIAVRNAGMRIGLRRPRLTKNVQRLLVLALPA HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHH AITGGITQINLLINTNIASAGEGVISSLAYADRIYQLPLGVVGIAVATVLLPELARALRG HHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GHMVEAGSLQNRSVEFVLFLTLPAAAALLVMAEPIVRFLYERGNFSPSATITVAQILGIY CCEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GLGLPAFVLIKAFIPGFFAREDTRTPMIFAAVSVVVNVSLALTLFPRLGGPGIAIAEITA HCCHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH GWVNAALLFGMLLWRGHWHVDIPLLTRIPRLLLAAALMAGFVHYALTWLSFELSSASSIF HHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VRAGTIMGLVFTAMLVYFVLAFVSGGADIGMVKRAVRKRGKKTAETEVG HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11481430; 11274131 [H]