Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is cah [H]
Identifier: 15889755
GI number: 15889755
Start: 2457274
End: 2457915
Strand: Direct
Name: cah [H]
Synonym: Atu2488
Alternate gene names: 15889755
Gene position: 2457274-2457915 (Clockwise)
Preceding gene: 159185237
Following gene: 159185241
Centisome position: 86.48
GC content: 58.26
Gene sequence:
>642_bases ATGAAAGATTTTCCGGAAACACTTCTCAACGGCTACAAGAACTTCATGAGCGGCCGCTATGTCGATGAGCGCGAAAGATA CCGCGTTCTCGCCGATACCGGACAGAAACCGCAGACCCTGTTCATTGCCTGTTGTGACTCCCGTTCGGCGCCGGAAACCA TTTTCGACTGCGGACCGGGAGAACTTTTCGTTGTTCGCAACGTCGCCAACATGGTGCCGCCATTCGAGCCGGACGGACAG TATCACGCCACGTCGGCCGCCATCGAATATGCCGTGCAGGTTCTCAAGGTGAAGGATATCGTCGTCATGGGCCACGGCCG CTGCGGCGGCATTCAGGCGGCGCTTGACCCCAATCTCGAGCCGCTGTCACCAGGCGATTTCATCGGCAAATGGATGAACA TGGTCAAATCGGCGGCCGAACAAATCCAGAGTAACGACGTCATGACCGCCTCCGAACGCCAGACGGCGCTGGAACGCGTC TCCATCCGCAACTCCATCGCCAACCTACGTGGTTTCCCCTTCGTCAAGGCACAGGAGACCGCCGGCAAGGTCAAGCTGCA CGGCGCATGGTTCGATATCTCGACCGGTGAATTGTGGGTGATGGACAGCAAAACGGGCGACTTTCGCCGCCCGGATCTGT GA
Upstream 100 bases:
>100_bases TTCGCGGTTCGAAGAAAAGCGAAAATGCTCTAAAGGATTGGTCTTCAACGCGCCGAGTTCCTCTCTTGATCTCGGTCCAA CCACAACGGTACTGCGATAG
Downstream 100 bases:
>100_bases AAACAGGTTTCTGATTGAAAGAGCGAGACGGCCTTATTGGCCGTCGATCGCCTTGCCGATGAAGGCGATGGCCTGTTGAT AGACGCTTGCCGCGTTCCAA
Product: carbonate dehydratase
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKDFPETLLNGYKNFMSGRYVDERERYRVLADTGQKPQTLFIACCDSRSAPETIFDCGPGELFVVRNVANMVPPFEPDGQ YHATSAAIEYAVQVLKVKDIVVMGHGRCGGIQAALDPNLEPLSPGDFIGKWMNMVKSAAEQIQSNDVMTASERQTALERV SIRNSIANLRGFPFVKAQETAGKVKLHGAWFDISTGELWVMDSKTGDFRRPDL
Sequences:
>Translated_213_residues MKDFPETLLNGYKNFMSGRYVDERERYRVLADTGQKPQTLFIACCDSRSAPETIFDCGPGELFVVRNVANMVPPFEPDGQ YHATSAAIEYAVQVLKVKDIVVMGHGRCGGIQAALDPNLEPLSPGDFIGKWMNMVKSAAEQIQSNDVMTASERQTALERV SIRNSIANLRGFPFVKAQETAGKVKLHGAWFDISTGELWVMDSKTGDFRRPDL >Mature_213_residues MKDFPETLLNGYKNFMSGRYVDERERYRVLADTGQKPQTLFIACCDSRSAPETIFDCGPGELFVVRNVANMVPPFEPDGQ YHATSAAIEYAVQVLKVKDIVVMGHGRCGGIQAALDPNLEPLSPGDFIGKWMNMVKSAAEQIQSNDVMTASERQTALERV SIRNSIANLRGFPFVKAQETAGKVKLHGAWFDISTGELWVMDSKTGDFRRPDL
Specific function: Reversible Hydration Of Carbon Dioxide. Carbon Dioxide Formed In The Bicarbonate-Dependent Decomposition Of Cyanate By Cyanase (Cyns) Diffuses Out Of The Cell Faster Than It Would Be Hydrated To Bicarbonate, So The Apparent Function Of This Enzyme Is To C
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786534, Length=203, Percent_Identity=33.0049261083744, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1786318, Length=172, Percent_Identity=32.5581395348837, Blast_Score=78, Evalue=4e-16, Organism=Caenorhabditis elegans, GI115532990, Length=239, Percent_Identity=25.1046025104602, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI25147564, Length=207, Percent_Identity=25.6038647342995, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324292, Length=176, Percent_Identity=26.1363636363636, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 23667; Mature: 23667
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00705 PROK_CO2_ANHYDRASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDFPETLLNGYKNFMSGRYVDERERYRVLADTGQKPQTLFIACCDSRSAPETIFDCGPG CCCHHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCC ELFVVRNVANMVPPFEPDGQYHATSAAIEYAVQVLKVKDIVVMGHGRCGGIQAALDPNLE CEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCEECCCCCCCC PLSPGDFIGKWMNMVKSAAEQIQSNDVMTASERQTALERVSIRNSIANLRGFPFVKAQET CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCC AGKVKLHGAWFDISTGELWVMDSKTGDFRRPDL CCEEEEEEEEEEECCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MKDFPETLLNGYKNFMSGRYVDERERYRVLADTGQKPQTLFIACCDSRSAPETIFDCGPG CCCHHHHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCEEEEEEECCCCCCCCEEECCCC ELFVVRNVANMVPPFEPDGQYHATSAAIEYAVQVLKVKDIVVMGHGRCGGIQAALDPNLE CEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCEECCCCCCCC PLSPGDFIGKWMNMVKSAAEQIQSNDVMTASERQTALERVSIRNSIANLRGFPFVKAQET CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCC AGKVKLHGAWFDISTGELWVMDSKTGDFRRPDL CCEEEEEEEEEEECCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]