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The map label for this gene is 15889308

Identifier: 15889308

GI number: 15889308

Start: 1981059

End: 1981712

Strand: Reverse

Name: 15889308

Synonym: Atu2020

Alternate gene names: NA

Gene position: 1981712-1981059 (Counterclockwise)

Preceding gene: 15889309

Following gene: 15889307

Centisome position: 69.74

GC content: 62.23

Gene sequence:

>654_bases
TTGGCTTCCGACCCGATCACAACGCAGGAATTTTCGCCGCGCCAGAACGCCGTTCTGGACCAGGCATTGCGTCTATTGGT
CGAGGGCGGCGAGAAAGCGCTCACCACATCCGGGCTGGCGCGTGCCGCCAACTGTTCGAAGGAAAGCCTCTACAAATGGT
TCGGCGATCGCGACGGCCTGCTGGCGGCGATGATCACCTTCCAGCAGAGCAAGGTTCGCACCTTCGAGAAAGCGGGCGAC
CGCGTCTCCGCGCCGCAGCTTGCCGATCATCTCGAGGTTTTCGCACATGATCTGCTGGACGTGCTGGCGGGCGATGTATC
GCTGGCGCTCAATCGTCTTGCCATCGGGCAGGCGAGCCGCGACGGTTCGAAGCTTGGCGATCTGCTGCTGGAACGCGGCC
GTCGCCAGATCGACCGCCGCGCCCGTGGACTGATCGAGGCGGGTCGCCGTTCCGGCTACCTGCGTTTCGATGACGCCGAA
GAGGCGTATCGCAGTTTTTACGGCCTCATCGTTTCGGATTTGCATGTGCGCATGCTGCTGGGCGAGGCGCCGGACAAGGA
TTTTTCCGCCCGGGCCAAGAAGGCGGTCGTCGCCTTTTTGACGCTCTATGGAACGGAAAAGGTGCATTCGGAACTGGGCG
GCAAGGTCGCTTAA

Upstream 100 bases:

>100_bases
TCCCTCTAAAGAATCCGCTTGACCGCAACGCTGCCTCCGCTTAAATGGCGCTCGAACCGTACCGTACGGTACATCAATCT
AGCCCCTGGAGTGGAAAGAC

Downstream 100 bases:

>100_bases
GGTTCCGGTTAAGACAATAGAGACAAGCATTAGGGAAGGACCATAAAATGCGCGTTTATTATGATCGTGATGCGGATCTC
AATCTCATCAAGTCCAAGAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein; Regulatory Protein TetR

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MASDPITTQEFSPRQNAVLDQALRLLVEGGEKALTTSGLARAANCSKESLYKWFGDRDGLLAAMITFQQSKVRTFEKAGD
RVSAPQLADHLEVFAHDLLDVLAGDVSLALNRLAIGQASRDGSKLGDLLLERGRRQIDRRARGLIEAGRRSGYLRFDDAE
EAYRSFYGLIVSDLHVRMLLGEAPDKDFSARAKKAVVAFLTLYGTEKVHSELGGKVA

Sequences:

>Translated_217_residues
MASDPITTQEFSPRQNAVLDQALRLLVEGGEKALTTSGLARAANCSKESLYKWFGDRDGLLAAMITFQQSKVRTFEKAGD
RVSAPQLADHLEVFAHDLLDVLAGDVSLALNRLAIGQASRDGSKLGDLLLERGRRQIDRRARGLIEAGRRSGYLRFDDAE
EAYRSFYGLIVSDLHVRMLLGEAPDKDFSARAKKAVVAFLTLYGTEKVHSELGGKVA
>Mature_216_residues
ASDPITTQEFSPRQNAVLDQALRLLVEGGEKALTTSGLARAANCSKESLYKWFGDRDGLLAAMITFQQSKVRTFEKAGDR
VSAPQLADHLEVFAHDLLDVLAGDVSLALNRLAIGQASRDGSKLGDLLLERGRRQIDRRARGLIEAGRRSGYLRFDDAEE
AYRSFYGLIVSDLHVRMLLGEAPDKDFSARAKKAVVAFLTLYGTEKVHSELGGKVA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23795; Mature: 23664

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASDPITTQEFSPRQNAVLDQALRLLVEGGEKALTTSGLARAANCSKESLYKWFGDRDGL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCH
LAAMITFQQSKVRTFEKAGDRVSAPQLADHLEVFAHDLLDVLAGDVSLALNRLAIGQASR
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DGSKLGDLLLERGRRQIDRRARGLIEAGRRSGYLRFDDAEEAYRSFYGLIVSDLHVRMLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH
GEAPDKDFSARAKKAVVAFLTLYGTEKVHSELGGKVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ASDPITTQEFSPRQNAVLDQALRLLVEGGEKALTTSGLARAANCSKESLYKWFGDRDGL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCH
LAAMITFQQSKVRTFEKAGDRVSAPQLADHLEVFAHDLLDVLAGDVSLALNRLAIGQASR
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DGSKLGDLLLERGRRQIDRRARGLIEAGRRSGYLRFDDAEEAYRSFYGLIVSDLHVRMLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH
GEAPDKDFSARAKKAVVAFLTLYGTEKVHSELGGKVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA