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The map label for this gene is nocM [H]

Identifier: 15889180

GI number: 15889180

Start: 1861713

End: 1862543

Strand: Direct

Name: nocM [H]

Synonym: Atu1881

Alternate gene names: 15889180

Gene position: 1861713-1862543 (Clockwise)

Preceding gene: 15889179

Following gene: 159184963

Centisome position: 65.52

GC content: 61.01

Gene sequence:

>831_bases
ATGAGCCATATCCAGGAACTCATTCCGCCGCGGCCCGCCCCCGTTGTCGCCGACAAGCCGCTCAATCTTTCCCGCGTCGT
CGGCATTGCCGTCATCACGCTTTGGCTGCTGCTCGCCGCCGGGCTGATCTTCGCCATGATCGAAGGCTGGGACTGGGATA
AATTCCAACGTTATGGCCCTCGTTACATCGATGGCCTCATCACCACCATCACGCTGGTCGGCAGCTCGATCATTCTCGGC
GCAATCCTGTCCGTGCCGATCGCCTTTGCCCGCATGTCGGAAAACCGCATCATCGGCGCGTTCGCTTATGCCTATGTCTA
TGTGTTCCGCAGCACGCCGTTGCTCGCACAGCTCTTCCTGATCTATTACGGCCTTGGCAGCTTCCGCCCGGCGCTGGAAG
CCGTCGATCTGTGGTGGTTCTTCCGCGAAGCCTGGTATTGCGGCCTCCTGTCGCTAACGCTCAACACCGCCGCCTATCAG
GCCGAGATCCTGCGCGGCGCCATCCGGAGCGTGCCGCGCGGCCAGCATGAGGGGGCCGCCTCCCTCGGCATTTCGAAATT
CATTACCTTCCGCAAGGTCATCCTGCCGCAGGCGCTGATCGTCGCATTGCGCCCCTATGGCAACGAGATCATCCTGATGA
TCAAGGGCTCGGCAGTCGTTTCCATCGTCACGGTCTTCGACCTGATGGGACAGACCCGTTACGCCTTTTCCCGCACCTTC
GATTATCAGGCCTATCTCTGGGCCGCGATCTTCTACCTGACGATCGTCGAAACGCTGCGGCATATCTGGGCGTGGCTGGA
AGCCCGCCTGACGCGACACCTCAAGCGCTGA

Upstream 100 bases:

>100_bases
TCTACGGCATCGCCTGCCTGCTTTATCTCATTCTCGCGCTCATCTCGTCGGTCGGCATCGGTTTCATCGACCGCTGGTCT
CGCAAATCGGAGGCCAGACG

Downstream 100 bases:

>100_bases
ACGGCAACGTTGGCAGCACTCATCAACGGAGGCTGCCAACATTTTGAAAAATATAACAAATTTGTGACGGTCGGTGCCCT
TGGCAAGCTTGGATTAACCC

Product: ABC transporter, membrane spanning protein (amino acid)

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSHIQELIPPRPAPVVADKPLNLSRVVGIAVITLWLLLAAGLIFAMIEGWDWDKFQRYGPRYIDGLITTITLVGSSIILG
AILSVPIAFARMSENRIIGAFAYAYVYVFRSTPLLAQLFLIYYGLGSFRPALEAVDLWWFFREAWYCGLLSLTLNTAAYQ
AEILRGAIRSVPRGQHEGAASLGISKFITFRKVILPQALIVALRPYGNEIILMIKGSAVVSIVTVFDLMGQTRYAFSRTF
DYQAYLWAAIFYLTIVETLRHIWAWLEARLTRHLKR

Sequences:

>Translated_276_residues
MSHIQELIPPRPAPVVADKPLNLSRVVGIAVITLWLLLAAGLIFAMIEGWDWDKFQRYGPRYIDGLITTITLVGSSIILG
AILSVPIAFARMSENRIIGAFAYAYVYVFRSTPLLAQLFLIYYGLGSFRPALEAVDLWWFFREAWYCGLLSLTLNTAAYQ
AEILRGAIRSVPRGQHEGAASLGISKFITFRKVILPQALIVALRPYGNEIILMIKGSAVVSIVTVFDLMGQTRYAFSRTF
DYQAYLWAAIFYLTIVETLRHIWAWLEARLTRHLKR
>Mature_275_residues
SHIQELIPPRPAPVVADKPLNLSRVVGIAVITLWLLLAAGLIFAMIEGWDWDKFQRYGPRYIDGLITTITLVGSSIILGA
ILSVPIAFARMSENRIIGAFAYAYVYVFRSTPLLAQLFLIYYGLGSFRPALEAVDLWWFFREAWYCGLLSLTLNTAAYQA
EILRGAIRSVPRGQHEGAASLGISKFITFRKVILPQALIVALRPYGNEIILMIKGSAVVSIVTVFDLMGQTRYAFSRTFD
YQAYLWAAIFYLTIVETLRHIWAWLEARLTRHLKR

Specific function: Component of the nopaline active transport system probably consisting of four subunits:Q, M, P and T. This system is also capable of transporting octopine provided that catabolic functions are induced with nopaline [H]

COG id: COG4160

COG function: function code E; ABC-type arginine/histidine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787086, Length=199, Percent_Identity=35.1758793969849, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1788645, Length=213, Percent_Identity=38.0281690140845, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI1788226, Length=218, Percent_Identity=34.8623853211009, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=30.0448430493274, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788646, Length=216, Percent_Identity=27.3148148148148, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1786874, Length=220, Percent_Identity=28.6363636363636, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787030, Length=222, Percent_Identity=29.2792792792793, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1786873, Length=178, Percent_Identity=26.9662921348315, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082239, Length=223, Percent_Identity=28.6995515695067, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI48994930, Length=80, Percent_Identity=40, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31222; Mature: 31091

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHIQELIPPRPAPVVADKPLNLSRVVGIAVITLWLLLAAGLIFAMIEGWDWDKFQRYGP
CCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
RYIDGLITTITLVGSSIILGAILSVPIAFARMSENRIIGAFAYAYVYVFRSTPLLAQLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHH
IYYGLGSFRPALEAVDLWWFFREAWYCGLLSLTLNTAAYQAEILRGAIRSVPRGQHEGAA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
SLGISKFITFRKVILPQALIVALRPYGNEIILMIKGSAVVSIVTVFDLMGQTRYAFSRTF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHHHHCC
DYQAYLWAAIFYLTIVETLRHIWAWLEARLTRHLKR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHIQELIPPRPAPVVADKPLNLSRVVGIAVITLWLLLAAGLIFAMIEGWDWDKFQRYGP
CCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
RYIDGLITTITLVGSSIILGAILSVPIAFARMSENRIIGAFAYAYVYVFRSTPLLAQLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHH
IYYGLGSFRPALEAVDLWWFFREAWYCGLLSLTLNTAAYQAEILRGAIRSVPRGQHEGAA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
SLGISKFITFRKVILPQALIVALRPYGNEIILMIKGSAVVSIVTVFDLMGQTRYAFSRTF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHHHHCC
DYQAYLWAAIFYLTIVETLRHIWAWLEARLTRHLKR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1732218; 11743193; 11743194 [H]