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The map label for this gene is yebA [H]

Identifier: 15889135

GI number: 15889135

Start: 1814546

End: 1815844

Strand: Direct

Name: yebA [H]

Synonym: Atu1832

Alternate gene names: 15889135

Gene position: 1814546-1815844 (Clockwise)

Preceding gene: 159184940

Following gene: 15889136

Centisome position: 63.86

GC content: 63.66

Gene sequence:

>1299_bases
GTGACTGATACGGCGGAAAATCGGGTATTCGGCAAGAAACGCGAGCCACATGTGCTCATTCTCGCGCGCGGCGAAAACGT
GCGGCACATGACCATCCGGCCGTGGATGGCGGCGCTCGCCGGCTGCACGATCGGCCTGTTTTCGCTCGGTTATCTCGGTG
CTACCGGCTACCTCATCTTGCGCGACGACCTGATCGGCGCGACCATGGCGCGCCAGACGCGCATGCAGAACGACTATGAA
GACCGCATCGCGGCGCTGAGAGCCCAGGTGGACCGCGTCACCTCCCGGCAATTGCTCGATCAGCAGGTCGTTGAAAAAAA
AGTGGAGAAACTGCTGGAACAGCAGGCTGCGCTGACCTCGCGCCACGGTCGCATGAGCGAGCTTCTTGAGCGCGCCGAAA
ATTCCGGCATCGCAGCCACCACCCCGGCCGCGCCCTCTTCCCTCTCGAATGCCATGGTTCCGGAAAAACGCGCCGACCTC
TCCGGCGGCCTTTCCGCCATCGAAAAGCTGATGGCGCCGAAGCCGCAGGCGGAAAAAGCCGCCGCAGCCGACAGACGGGC
CGCCTATGTGCCTGAATCCGGCGAAACACCTTCCGACCGTGCGGACCGGGTCTTCTCCAAGGTCACGCTGTCGCTGAAGG
ATATCGAACGCCAGCAGATATCGCGCATCGCCCGGCTGACCAGCGACGCCGAGGACAAGGCAAGCGCCATGCAGGACATC
ATCCGGCAGGCGGGCCTGAAGATCGAAGAAAACGGCACCGACGATGTCGGCGGTCCCTATGCCGCGCCTTTGGGCGGTGA
GACCGACCCGTTCAACCTGTCGCTCACCAGTCTCGACAATGCGCTGAACCGGCTTGATGTCGTCAAGGAAAGTGCGACTG
CCCTGCCCTTCGGCAACCCTGCCCCCGGCCGGGCGATCACCAGCCGATTCGGCAACCGGATGGATCCGTTTCTCGGACGT
CCCGCTTTGCATACCGGCATCGATTTTCGTGCTGAAACCGGCGCGGACGTCAAATCCACGGGCGCCGGCAAGGTGACGGT
GGCGGAAAACTCCGGCGGTTACGGCAATATGGTCGAGATCGATCACGGCCAGGGCGTCTCCACCCGATTCGGCCACCTCT
CCGCCATCCTCGTCCGGGCTGGCGACCGGGTGGAAGCCGGCGACGTCATCGGCCGCGCCGGCAGCACCGGCCGCTCCACC
GGCCCGCATGTGCATTACGAAGTGCGGCGCAACGATACACCGGTCGATCCCATGCGATACCTGATCGCCGGAGCGGAGCT
GAAAACCTATCTAAAATAG

Upstream 100 bases:

>100_bases
GCCATAGCTGACGCCCAACGATACGCATCTCCGGCAAAACTTCGTTAACCTTAACGAATTATGATTTCCGTTAAGACATC
GGCCAGTCCGGAGAGAGATT

Downstream 100 bases:

>100_bases
CAGGCTGATTTTAACCCTTCTTTTGCTCTTTTAACGATAAATCACACAAATTCACGGTGAGGGCTCAAAAGCCCCGCCCG
GAGCATCACGTTTCGCGCGC

Product: membrane protein associated metalloendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MTDTAENRVFGKKREPHVLILARGENVRHMTIRPWMAALAGCTIGLFSLGYLGATGYLILRDDLIGATMARQTRMQNDYE
DRIAALRAQVDRVTSRQLLDQQVVEKKVEKLLEQQAALTSRHGRMSELLERAENSGIAATTPAAPSSLSNAMVPEKRADL
SGGLSAIEKLMAPKPQAEKAAAADRRAAYVPESGETPSDRADRVFSKVTLSLKDIERQQISRIARLTSDAEDKASAMQDI
IRQAGLKIEENGTDDVGGPYAAPLGGETDPFNLSLTSLDNALNRLDVVKESATALPFGNPAPGRAITSRFGNRMDPFLGR
PALHTGIDFRAETGADVKSTGAGKVTVAENSGGYGNMVEIDHGQGVSTRFGHLSAILVRAGDRVEAGDVIGRAGSTGRST
GPHVHYEVRRNDTPVDPMRYLIAGAELKTYLK

Sequences:

>Translated_432_residues
MTDTAENRVFGKKREPHVLILARGENVRHMTIRPWMAALAGCTIGLFSLGYLGATGYLILRDDLIGATMARQTRMQNDYE
DRIAALRAQVDRVTSRQLLDQQVVEKKVEKLLEQQAALTSRHGRMSELLERAENSGIAATTPAAPSSLSNAMVPEKRADL
SGGLSAIEKLMAPKPQAEKAAAADRRAAYVPESGETPSDRADRVFSKVTLSLKDIERQQISRIARLTSDAEDKASAMQDI
IRQAGLKIEENGTDDVGGPYAAPLGGETDPFNLSLTSLDNALNRLDVVKESATALPFGNPAPGRAITSRFGNRMDPFLGR
PALHTGIDFRAETGADVKSTGAGKVTVAENSGGYGNMVEIDHGQGVSTRFGHLSAILVRAGDRVEAGDVIGRAGSTGRST
GPHVHYEVRRNDTPVDPMRYLIAGAELKTYLK
>Mature_431_residues
TDTAENRVFGKKREPHVLILARGENVRHMTIRPWMAALAGCTIGLFSLGYLGATGYLILRDDLIGATMARQTRMQNDYED
RIAALRAQVDRVTSRQLLDQQVVEKKVEKLLEQQAALTSRHGRMSELLERAENSGIAATTPAAPSSLSNAMVPEKRADLS
GGLSAIEKLMAPKPQAEKAAAADRRAAYVPESGETPSDRADRVFSKVTLSLKDIERQQISRIARLTSDAEDKASAMQDII
RQAGLKIEENGTDDVGGPYAAPLGGETDPFNLSLTSLDNALNRLDVVKESATALPFGNPAPGRAITSRFGNRMDPFLGRP
ALHTGIDFRAETGADVKSTGAGKVTVAENSGGYGNMVEIDHGQGVSTRFGHLSAILVRAGDRVEAGDVIGRAGSTGRSTG
PHVHYEVRRNDTPVDPMRYLIAGAELKTYLK

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=114, Percent_Identity=48.2456140350877, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI87082174, Length=97, Percent_Identity=38.1443298969072, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87082297, Length=113, Percent_Identity=31.858407079646, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1789099, Length=112, Percent_Identity=33.9285714285714, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 46542; Mature: 46411

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTAENRVFGKKREPHVLILARGENVRHMTIRPWMAALAGCTIGLFSLGYLGATGYLIL
CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
RDDLIGATMARQTRMQNDYEDRIAALRAQVDRVTSRQLLDQQVVEKKVEKLLEQQAALTS
ECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHGRMSELLERAENSGIAATTPAAPSSLSNAMVPEKRADLSGGLSAIEKLMAPKPQAEKA
CCCHHHHHHHHHHCCCCEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
AAADRRAAYVPESGETPSDRADRVFSKVTLSLKDIERQQISRIARLTSDAEDKASAMQDI
HHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IRQAGLKIEENGTDDVGGPYAAPLGGETDPFNLSLTSLDNALNRLDVVKESATALPFGNP
HHHCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCC
APGRAITSRFGNRMDPFLGRPALHTGIDFRAETGADVKSTGAGKVTVAENSGGYGNMVEI
CCCHHHHHHHCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE
DHGQGVSTRFGHLSAILVRAGDRVEAGDVIGRAGSTGRSTGPHVHYEVRRNDTPVDPMRY
ECCCCCCHHHHHHHHHEECCCCCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHH
LIAGAELKTYLK
HHHHHHHHHHCC
>Mature Secondary Structure 
TDTAENRVFGKKREPHVLILARGENVRHMTIRPWMAALAGCTIGLFSLGYLGATGYLIL
CCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
RDDLIGATMARQTRMQNDYEDRIAALRAQVDRVTSRQLLDQQVVEKKVEKLLEQQAALTS
ECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHGRMSELLERAENSGIAATTPAAPSSLSNAMVPEKRADLSGGLSAIEKLMAPKPQAEKA
CCCHHHHHHHHHHCCCCEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
AAADRRAAYVPESGETPSDRADRVFSKVTLSLKDIERQQISRIARLTSDAEDKASAMQDI
HHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IRQAGLKIEENGTDDVGGPYAAPLGGETDPFNLSLTSLDNALNRLDVVKESATALPFGNP
HHHCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCC
APGRAITSRFGNRMDPFLGRPALHTGIDFRAETGADVKSTGAGKVTVAENSGGYGNMVEI
CCCHHHHHHHCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE
DHGQGVSTRFGHLSAILVRAGDRVEAGDVIGRAGSTGRSTGPHVHYEVRRNDTPVDPMRY
ECCCCCCHHHHHHHHHEECCCCCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHH
LIAGAELKTYLK
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]