Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889085
Identifier: 15889085
GI number: 15889085
Start: 1768612
End: 1768884
Strand: Direct
Name: 15889085
Synonym: Atu1781
Alternate gene names: NA
Gene position: 1768612-1768884 (Clockwise)
Preceding gene: 159184915
Following gene: 15889098
Centisome position: 62.24
GC content: 59.71
Gene sequence:
>273_bases ATGAACATGATCGACCCGCGCCGCCCACCGCCCGCCTTCAGAAAGGGCTACGCGCTCTGCTCACCGCAAAACGTCCTGCA ACCCGACACCTTCGCCAAAAGCCAGAAGAAGGCAATCGGGAAACAATTCAAGAAACCCGGCCGCAAGAGCGCCTGGGCGC AGGCGCTGGAAGAAGGCTGGACCGTGAGGCTGGTCTATATGCGGCTTTTCGTTCCGGTTTTCCACGCGACCACAACGGGG ACAGAGGTGGACGATCTGGATGACGAGGATTGA
Upstream 100 bases:
>100_bases ATTGACCGGTCCGCGCGGGGAAAGCCTGCGCACCCTGCTCTATCTGCACCGCCGCGACGAAGCGATCCGCTTCCTGCATG CCGGCTGAAAGTGAACAACC
Downstream 100 bases:
>100_bases TTTGGGCACACTGAGAGTGTTGTTTGGTCAGAGCGCCGAAGGCCAACGCCGCGAGGTATGGATGATCGTCAGGATTTCGA TATCCCGGCCGACGCGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MNMIDPRRPPPAFRKGYALCSPQNVLQPDTFAKSQKKAIGKQFKKPGRKSAWAQALEEGWTVRLVYMRLFVPVFHATTTG TEVDDLDDED
Sequences:
>Translated_90_residues MNMIDPRRPPPAFRKGYALCSPQNVLQPDTFAKSQKKAIGKQFKKPGRKSAWAQALEEGWTVRLVYMRLFVPVFHATTTG TEVDDLDDED >Mature_90_residues MNMIDPRRPPPAFRKGYALCSPQNVLQPDTFAKSQKKAIGKQFKKPGRKSAWAQALEEGWTVRLVYMRLFVPVFHATTTG TEVDDLDDED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10239; Mature: 10239
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMIDPRRPPPAFRKGYALCSPQNVLQPDTFAKSQKKAIGKQFKKPGRKSAWAQALEEGW CCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC TVRLVYMRLFVPVFHATTTGTEVDDLDDED CHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNMIDPRRPPPAFRKGYALCSPQNVLQPDTFAKSQKKAIGKQFKKPGRKSAWAQALEEGW CCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC TVRLVYMRLFVPVFHATTTGTEVDDLDDED CHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA