Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15888758

Identifier: 15888758

GI number: 15888758

Start: 1427802

End: 1428446

Strand: Direct

Name: 15888758

Synonym: Atu1433

Alternate gene names: NA

Gene position: 1427802-1428446 (Clockwise)

Preceding gene: 159184758

Following gene: 15888759

Centisome position: 50.25

GC content: 60.78

Gene sequence:

>645_bases
ATGGTGAAGTCGGTCCTCTGCTTTGGCGATTCTCTCACATGGGGATCAAATGCGGAAACGGGTGGCCGGCACAGCCATGA
CGATCTTTGGCCGAGCGTCTTGCAGAAGGCGCTCGGTTCCGACGTGCATGTGATCCACGAGGGTCTGGGCGGTCGCACCA
CCGCTTATGACGACCACACCGGCGATTGCGACCGCAATGGCGCAAGGCTTTTGCCGACGCTGCTGCATAGCCACGCGCCG
CTGGATATGGTTATCATCATGCTCGGCACCAACGACATGAAGCCGGCGATCCATGGTTCGGCCATTGTCGCCATGAAGGG
TGTCGAGCGGCTGGTGAAACTCACGCGCAACCACGTCTGGCAGGTGTCGGACTGGGAAGCACCTGACGTTCTGATCGTCG
CGCCGCCGCAACTATGCGAAACGGCCAATCCGTTCATGGGCGCGATCTTTCGTGATGCTATCGACGAATCGGCGATGCTG
GCTTCCGTCTACAGGGACCTTGCCGATGAACTCGATTGCGGCTTTTTCGATGCCGGGTCGGTTGCCCGCACGACGCCGGT
GGACGGCGTTCATCTCGATGCTGAAAACACACGGGCCATCGGCCGCGGGCTGGAGCCCGTCGTCCGCATGATGCTCGGAC
TTTGA

Upstream 100 bases:

>100_bases
CCATCGCTGCGTCGATGGCGCGCTCGGAGCCGAACTGATCGGCGCGTTCAAGCGCTACATCGAAAACCCGATGGGCATGC
TGGTTTGATCGGAGAATAAT

Downstream 100 bases:

>100_bases
CACTCATTCTCGTTTCGGGACGGTTTACCATCATCCGAACAAGACAAGGCAGGATTTCCAATGGCTCAATCTTATGACGT
CATCATCATCGGTTCGGGAC

Product: arylesterase

Products: NA

Alternate protein names: Arylesterase Protein; GDSL Family Lipase; Lipolytic G-D-S-L; GDSL-Family Lipase/Acylhydrolase; Hydrolase; Lipolytic Protein; Methylated-DNA-Protein-Cysteinemethyltransferase; Lipolytic G-D-S-L Family; GDSL-Like Lipase/Acylhydrolase; Lipolytic Protein G-D-S-L Family; Lysophospholipase-Like Protein

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MVKSVLCFGDSLTWGSNAETGGRHSHDDLWPSVLQKALGSDVHVIHEGLGGRTTAYDDHTGDCDRNGARLLPTLLHSHAP
LDMVIIMLGTNDMKPAIHGSAIVAMKGVERLVKLTRNHVWQVSDWEAPDVLIVAPPQLCETANPFMGAIFRDAIDESAML
ASVYRDLADELDCGFFDAGSVARTTPVDGVHLDAENTRAIGRGLEPVVRMMLGL

Sequences:

>Translated_214_residues
MVKSVLCFGDSLTWGSNAETGGRHSHDDLWPSVLQKALGSDVHVIHEGLGGRTTAYDDHTGDCDRNGARLLPTLLHSHAP
LDMVIIMLGTNDMKPAIHGSAIVAMKGVERLVKLTRNHVWQVSDWEAPDVLIVAPPQLCETANPFMGAIFRDAIDESAML
ASVYRDLADELDCGFFDAGSVARTTPVDGVHLDAENTRAIGRGLEPVVRMMLGL
>Mature_214_residues
MVKSVLCFGDSLTWGSNAETGGRHSHDDLWPSVLQKALGSDVHVIHEGLGGRTTAYDDHTGDCDRNGARLLPTLLHSHAP
LDMVIIMLGTNDMKPAIHGSAIVAMKGVERLVKLTRNHVWQVSDWEAPDVLIVAPPQLCETANPFMGAIFRDAIDESAML
ASVYRDLADELDCGFFDAGSVARTTPVDGVHLDAENTRAIGRGLEPVVRMMLGL

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23135; Mature: 23135

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSVLCFGDSLTWGSNAETGGRHSHDDLWPSVLQKALGSDVHVIHEGLGGRTTAYDDHT
CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCCCCC
GDCDRNGARLLPTLLHSHAPLDMVIIMLGTNDMKPAIHGSAIVAMKGVERLVKLTRNHVW
CCCCCCCHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCE
QVSDWEAPDVLIVAPPQLCETANPFMGAIFRDAIDESAMLASVYRDLADELDCGFFDAGS
ECCCCCCCCEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VARTTPVDGVHLDAENTRAIGRGLEPVVRMMLGL
CCCCCCCCCEEECCCCHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MVKSVLCFGDSLTWGSNAETGGRHSHDDLWPSVLQKALGSDVHVIHEGLGGRTTAYDDHT
CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCCCCC
GDCDRNGARLLPTLLHSHAPLDMVIIMLGTNDMKPAIHGSAIVAMKGVERLVKLTRNHVW
CCCCCCCHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCE
QVSDWEAPDVLIVAPPQLCETANPFMGAIFRDAIDESAMLASVYRDLADELDCGFFDAGS
ECCCCCCCCEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VARTTPVDGVHLDAENTRAIGRGLEPVVRMMLGL
CCCCCCCCCEEECCCCHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA