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The map label for this gene is cycK [H]

Identifier: 15888318

GI number: 15888318

Start: 963363

End: 965354

Strand: Direct

Name: cycK [H]

Synonym: Atu0975

Alternate gene names: 15888318

Gene position: 963363-965354 (Clockwise)

Preceding gene: 15888317

Following gene: 159184558

Centisome position: 33.9

GC content: 62.3

Gene sequence:

>1992_bases
ATGATCAACGAGATCGGCCATTATGTCCTGGTTTTGGCGCTCGGTGTTGGGCTGATCGTCTCGACGCTGCCTGTTATCGG
CGCGCGCCGCAACGATCGGGCACTGATGGATGTCGCCTCCCTTGGCTCGGTCCTGATGTTCCTGCTGGTGGGGTTCTCCT
TCGCGGCACTGACACATGCCTATGCCGTCTCGGATTTTTCCGTGCGCAACGTCTGGGAAAACTCCCATTCGCTGATGCCG
ATGCTCTACAAGCTGACCGGTGTTTGGGGCAACCATGAAGGCTCCATGCTGTTGTGGCTGCTGATCCTGGTGTTTTTCAG
CGCGCTTGTCGCCGCCTTCGGCGGCAACCTGCCGGAAACGCTCAAAGCCAATGTGCTTGCGGTACAGGCATGGATTTCGG
TCGCCTTCCTGCTGTTCATCCTGCTCACCTCCAACCCGTTCCTGCGGCTGGAGCGGGTGCCGGCCGAGGGGCAGGACCTC
AATCCCATCCTTCAGGATTTCGGCCTCGCCATCCATCCGCCGCTGCTCTATCTCGGTTATGTCGGTTTTTCCGTCTGCTT
CTCCTTTGCCGTCGCAGCACTTCTGGAAGGTCGTATCGACGCCGCCTGGGCGCGCTGGGTAAGGCCGTGGACGCTCGCCG
CCTGGACGTTCCTGACCGCAGGTATCTCCATGGGCTCCTACTGGGCCTATTATGAACTCGGCTGGGGCGGCTGGTGGTTC
TGGGATCCGGTGGAAAACGCCTCCTTCATGCCCTGGCTTGCCGGCACGGCGCTGCTGCATTCGGCGCTCGTCATGGAAAA
ACGCGAGGCGCTGAAAATCTGGACCGTGCTTCTGGCGATCATGACCTTTTCGCTGTCGCTGCTCGGCACCTTCCTCGTGC
GCTCCGGCGTGCTGACCTCCGTGCATGCTTTCGCCACCGATCCGAGCCGCGGCATCTTCATTCTCGGCATTCTGACGATC
TTCATCGGTGGCGCCTTTGCGCTCTTTGCCTGGCGCGCGCCGTCGCTGAAGGCCGGCGGCCTGTTCGCGCCGATCTCGCG
TGAAGGCGCGCTCGTCCTCAACAACCTTATCCTGACGGTTTCGACCGCCACCGTGCTGATCGGCACGCTTTACCCGCTCA
TTCTCGAAACCCTGACGGGCGAAAAAATCTCGGTCGGTGCGCCGTTCTTCAACCTCACCTTCGGCCTGCTGATGATCCCG
GTCCTGATCGTCACACCTTTCGGGCCGATGCTCGCCTGGAAGCGCGGCGATCTCTTGGGTGCCTTCCAGCGGCTTTATGT
GGCCGCGGCTATCGCGGCTCTGGCCGGGCTGACCCTCTGGTATATCGAAAATGGCGGTCCGGTGCTGGCAGCACTCGGTA
TTGCCGCCGGTTTCTGGTTGATCTTCGGGGCGCTCACCGATCTCTGGTATCGCGCCAATTTCGGCAAACTGGCCTTCGGC
ATTGCATTCCGCCGCCTGAAAGGCCTGCCGCGTTCGGCCTTCGGCACGGCGCTGGCGCATATGGGCCTCGGCATCACCGT
GCTCGGCATCGTCATCGTCACCACCTATGAGACCGAAACGGTTCTGGAAATGAAACAGGGCACGGTGGCGGAAGCGGGCG
GTTACAGCCTGACCTTCGACGGCATCCGCCACGCCGTCGGCCCGAATTTCACCGAGGATCGTGGCCATTTCACCGTGCGC
AAGGCGGGTGTTGAGGTGGCCGACGTCTGGTCGTCCAAGCGGCTTTATACCGCGCGGCGCATGCCGACGACGGAAGCCGG
CATCCTGACCTTCGGCCTCAGCCAGCTTTATGTCTCGCTGGGCGATCCCATGGCCGATGGCGGCATGGTCGTGCGCATCT
GGTGGAAACCCTTCATCCTCTGCATCTGGGGCGGCACGCTGTTCATGATGGCGGGCGGTTTCATCTCGCTTTCCGACAGG
CGGTTGCGGGTGGGTGCGCCGACCCGCAAGGCGAAGCCTGTACGGGCTGCAATGCCGGAGGCGGCGGAATGA

Upstream 100 bases:

>100_bases
TGGCCGACCGGCTGAAGGACAAGGGCCTGTGGCAGCAGGGCGCTGAGGGAGCGGCACCCGCCGCCAGCGCCGCCTCAGGC
GACAAGACCGGAGCGACGAA

Downstream 100 bases:

>100_bases
GTGTTGCCTCGCTACCCTCATTCCTGTGCTTGTCACAGGAATCCAGCCGACGCGCGTCTGCGCGGCGAGAGAGTCCTTCA
AGCCCAAGGACTTGGGCTGG

Product: cytochrome c-type synthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 663; Mature: 663

Protein sequence:

>663_residues
MINEIGHYVLVLALGVGLIVSTLPVIGARRNDRALMDVASLGSVLMFLLVGFSFAALTHAYAVSDFSVRNVWENSHSLMP
MLYKLTGVWGNHEGSMLLWLLILVFFSALVAAFGGNLPETLKANVLAVQAWISVAFLLFILLTSNPFLRLERVPAEGQDL
NPILQDFGLAIHPPLLYLGYVGFSVCFSFAVAALLEGRIDAAWARWVRPWTLAAWTFLTAGISMGSYWAYYELGWGGWWF
WDPVENASFMPWLAGTALLHSALVMEKREALKIWTVLLAIMTFSLSLLGTFLVRSGVLTSVHAFATDPSRGIFILGILTI
FIGGAFALFAWRAPSLKAGGLFAPISREGALVLNNLILTVSTATVLIGTLYPLILETLTGEKISVGAPFFNLTFGLLMIP
VLIVTPFGPMLAWKRGDLLGAFQRLYVAAAIAALAGLTLWYIENGGPVLAALGIAAGFWLIFGALTDLWYRANFGKLAFG
IAFRRLKGLPRSAFGTALAHMGLGITVLGIVIVTTYETETVLEMKQGTVAEAGGYSLTFDGIRHAVGPNFTEDRGHFTVR
KAGVEVADVWSSKRLYTARRMPTTEAGILTFGLSQLYVSLGDPMADGGMVVRIWWKPFILCIWGGTLFMMAGGFISLSDR
RLRVGAPTRKAKPVRAAMPEAAE

Sequences:

>Translated_663_residues
MINEIGHYVLVLALGVGLIVSTLPVIGARRNDRALMDVASLGSVLMFLLVGFSFAALTHAYAVSDFSVRNVWENSHSLMP
MLYKLTGVWGNHEGSMLLWLLILVFFSALVAAFGGNLPETLKANVLAVQAWISVAFLLFILLTSNPFLRLERVPAEGQDL
NPILQDFGLAIHPPLLYLGYVGFSVCFSFAVAALLEGRIDAAWARWVRPWTLAAWTFLTAGISMGSYWAYYELGWGGWWF
WDPVENASFMPWLAGTALLHSALVMEKREALKIWTVLLAIMTFSLSLLGTFLVRSGVLTSVHAFATDPSRGIFILGILTI
FIGGAFALFAWRAPSLKAGGLFAPISREGALVLNNLILTVSTATVLIGTLYPLILETLTGEKISVGAPFFNLTFGLLMIP
VLIVTPFGPMLAWKRGDLLGAFQRLYVAAAIAALAGLTLWYIENGGPVLAALGIAAGFWLIFGALTDLWYRANFGKLAFG
IAFRRLKGLPRSAFGTALAHMGLGITVLGIVIVTTYETETVLEMKQGTVAEAGGYSLTFDGIRHAVGPNFTEDRGHFTVR
KAGVEVADVWSSKRLYTARRMPTTEAGILTFGLSQLYVSLGDPMADGGMVVRIWWKPFILCIWGGTLFMMAGGFISLSDR
RLRVGAPTRKAKPVRAAMPEAAE
>Mature_663_residues
MINEIGHYVLVLALGVGLIVSTLPVIGARRNDRALMDVASLGSVLMFLLVGFSFAALTHAYAVSDFSVRNVWENSHSLMP
MLYKLTGVWGNHEGSMLLWLLILVFFSALVAAFGGNLPETLKANVLAVQAWISVAFLLFILLTSNPFLRLERVPAEGQDL
NPILQDFGLAIHPPLLYLGYVGFSVCFSFAVAALLEGRIDAAWARWVRPWTLAAWTFLTAGISMGSYWAYYELGWGGWWF
WDPVENASFMPWLAGTALLHSALVMEKREALKIWTVLLAIMTFSLSLLGTFLVRSGVLTSVHAFATDPSRGIFILGILTI
FIGGAFALFAWRAPSLKAGGLFAPISREGALVLNNLILTVSTATVLIGTLYPLILETLTGEKISVGAPFFNLTFGLLMIP
VLIVTPFGPMLAWKRGDLLGAFQRLYVAAAIAALAGLTLWYIENGGPVLAALGIAAGFWLIFGALTDLWYRANFGKLAFG
IAFRRLKGLPRSAFGTALAHMGLGITVLGIVIVTTYETETVLEMKQGTVAEAGGYSLTFDGIRHAVGPNFTEDRGHFTVR
KAGVEVADVWSSKRLYTARRMPTTEAGILTFGLSQLYVSLGDPMADGGMVVRIWWKPFILCIWGGTLFMMAGGFISLSDR
RLRVGAPTRKAKPVRAAMPEAAE

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG1138

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

Organism=Escherichia coli, GI1788524, Length=657, Percent_Identity=44.5966514459665, Blast_Score=501, Evalue=1e-143,
Organism=Escherichia coli, GI1790511, Length=384, Percent_Identity=46.875, Blast_Score=273, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003567
- InterPro:   IPR003568 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 72092; Mature: 72092

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINEIGHYVLVLALGVGLIVSTLPVIGARRNDRALMDVASLGSVLMFLLVGFSFAALTHA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAVSDFSVRNVWENSHSLMPMLYKLTGVWGNHEGSMLLWLLILVFFSALVAAFGGNLPET
HHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
LKANVLAVQAWISVAFLLFILLTSNPFLRLERVPAEGQDLNPILQDFGLAIHPPLLYLGY
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHH
VGFSVCFSFAVAALLEGRIDAAWARWVRPWTLAAWTFLTAGISMGSYWAYYELGWGGWWF
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEE
WDPVENASFMPWLAGTALLHSALVMEKREALKIWTVLLAIMTFSLSLLGTFLVRSGVLTS
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
VHAFATDPSRGIFILGILTIFIGGAFALFAWRAPSLKAGGLFAPISREGALVLNNLILTV
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHH
STATVLIGTLYPLILETLTGEKISVGAPFFNLTFGLLMIPVLIVTPFGPMLAWKRGDLLG
HHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHH
AFQRLYVAAAIAALAGLTLWYIENGGPVLAALGIAAGFWLIFGALTDLWYRANFGKLAFG
HHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IAFRRLKGLPRSAFGTALAHMGLGITVLGIVIVTTYETETVLEMKQGTVAEAGGYSLTFD
HHHHHHCCCCCHHHHHHHHHHCCHHHEEHHHHEEECCHHHHHHHHCCCEECCCCCEEEHH
GIRHAVGPNFTEDRGHFTVRKAGVEVADVWSSKRLYTARRMPTTEAGILTFGLSQLYVSL
HHHHHCCCCCCCCCCCEEEEECCCHHHHHHCCCCEEEHHCCCCCCHHHHHHHHHHHHHHC
GDPMADGGMVVRIWWKPFILCIWGGTLFMMAGGFISLSDRRLRVGAPTRKAKPVRAAMPE
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCHHHCCCC
AAE
CCC
>Mature Secondary Structure
MINEIGHYVLVLALGVGLIVSTLPVIGARRNDRALMDVASLGSVLMFLLVGFSFAALTHA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAVSDFSVRNVWENSHSLMPMLYKLTGVWGNHEGSMLLWLLILVFFSALVAAFGGNLPET
HHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
LKANVLAVQAWISVAFLLFILLTSNPFLRLERVPAEGQDLNPILQDFGLAIHPPLLYLGY
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHH
VGFSVCFSFAVAALLEGRIDAAWARWVRPWTLAAWTFLTAGISMGSYWAYYELGWGGWWF
HHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEE
WDPVENASFMPWLAGTALLHSALVMEKREALKIWTVLLAIMTFSLSLLGTFLVRSGVLTS
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
VHAFATDPSRGIFILGILTIFIGGAFALFAWRAPSLKAGGLFAPISREGALVLNNLILTV
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHH
STATVLIGTLYPLILETLTGEKISVGAPFFNLTFGLLMIPVLIVTPFGPMLAWKRGDLLG
HHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHH
AFQRLYVAAAIAALAGLTLWYIENGGPVLAALGIAAGFWLIFGALTDLWYRANFGKLAFG
HHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IAFRRLKGLPRSAFGTALAHMGLGITVLGIVIVTTYETETVLEMKQGTVAEAGGYSLTFD
HHHHHHCCCCCHHHHHHHHHHCCHHHEEHHHHEEECCHHHHHHHHCCCEECCCCCEEEHH
GIRHAVGPNFTEDRGHFTVRKAGVEVADVWSSKRLYTARRMPTTEAGILTFGLSQLYVSL
HHHHHCCCCCCCCCCCEEEEECCCHHHHHHCCCCEEEHHCCCCCCHHHHHHHHHHHHHHC
GDPMADGGMVVRIWWKPFILCIWGGTLFMMAGGFISLSDRRLRVGAPTRKAKPVRAAMPE
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCHHHCCCC
AAE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7715602; 11481430 [H]