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The map label for this gene is cheD

Identifier: 15887869

GI number: 15887869

Start: 511047

End: 511592

Strand: Direct

Name: cheD

Synonym: Atu0521

Alternate gene names: 15887869

Gene position: 511047-511592 (Clockwise)

Preceding gene: 15887868

Following gene: 15887870

Centisome position: 17.98

GC content: 60.99

Gene sequence:

>546_bases
ATGATGGAAGCTGCGGCCAAGCGCGTACATATCATTCAGGGCGAGTATAAGGTTGTCAGCGATCCCGACGTGGTGATGAC
GACGATACTCGGTTCGTGCGTGGCCGCCTGTCTGAGAGACCCCGTTGCCGGCCTCGGAGGAATGAACCACTTCCTGCTGC
CGGGAACGGGCAATGTGACCGGCGGAGATGCGACGCGTTATGGCGTGCATCTCATGGAGCTGCTGATCAACGGTCTCTTG
AAGCAGGGCGCCCGCCGCGACCGGCTGGAAGCCAAGGTTTTCGGCGGCGCCAAGACGATCGCCAGCTTCTCGAATGTCGG
CGAGCAGAACGCCATCTTTGCCATGCAGTTCCTGAAGGACGAAGGCATTCCGGTCATCAGCTCCTCCACGGGCGGGGATC
ATGGCCGCAAGATCGAGTTCTGGCCGGTCTCTGGACGCGCGCGTCAGCATCCGCTCAGCGGTGCGGAAACCCAGAAGACG
GTTGCCATGGAAACACGTCCGGTGCCGGCACCCAAACCCGTCGCCAACGACATCGAATTTTTCTAG

Upstream 100 bases:

>100_bases
TGCAGAAGGCAGCCCAGCTCGGCGCCAACAACGTGCTGGCCAAGCCCTTCACCATCGACAAGATGCGCGCGGCCATCGAA
GCGGTTTTCGGATCGCTGAA

Downstream 100 bases:

>100_bases
TCACGGAGTTTCCAATGCAGCTTGCAGAGCACACCGCCACCACTCCGTTCGAAGAAGCCCTGCCGGATGTACTGATGCGG
GTGGTATCGGAACTGCACGA

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MMEAAAKRVHIIQGEYKVVSDPDVVMTTILGSCVAACLRDPVAGLGGMNHFLLPGTGNVTGGDATRYGVHLMELLINGLL
KQGARRDRLEAKVFGGAKTIASFSNVGEQNAIFAMQFLKDEGIPVISSSTGGDHGRKIEFWPVSGRARQHPLSGAETQKT
VAMETRPVPAPKPVANDIEFF

Sequences:

>Translated_181_residues
MMEAAAKRVHIIQGEYKVVSDPDVVMTTILGSCVAACLRDPVAGLGGMNHFLLPGTGNVTGGDATRYGVHLMELLINGLL
KQGARRDRLEAKVFGGAKTIASFSNVGEQNAIFAMQFLKDEGIPVISSSTGGDHGRKIEFWPVSGRARQHPLSGAETQKT
VAMETRPVPAPKPVANDIEFF
>Mature_181_residues
MMEAAAKRVHIIQGEYKVVSDPDVVMTTILGSCVAACLRDPVAGLGGMNHFLLPGTGNVTGGDATRYGVHLMELLINGLL
KQGARRDRLEAKVFGGAKTIASFSNVGEQNAIFAMQFLKDEGIPVISSSTGGDHGRKIEFWPVSGRARQHPLSGAETQKT
VAMETRPVPAPKPVANDIEFF

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED_AGRT5 (Q7D1A4)

Other databases:

- EMBL:   AE007869
- RefSeq:   NP_353550.1
- HSSP:   Q9X005
- ProteinModelPortal:   Q7D1A4
- SMR:   Q7D1A4
- STRING:   Q7D1A4
- GeneID:   1132559
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu0521
- eggNOG:   COG1871
- HOGENOM:   HBG531149
- OMA:   FAMQFLR
- ProtClustDB:   PRK13497
- BioCyc:   ATUM176299-1:ATU0521-MONOMER
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 19332; Mature: 19332

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEAAAKRVHIIQGEYKVVSDPDVVMTTILGSCVAACLRDPVAGLGGMNHFLLPGTGNVT
CCCCHHHEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEECCCCCCC
GGDATRYGVHLMELLINGLLKQGARRDRLEAKVFGGAKTIASFSNVGEQNAIFAMQFLKD
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHC
EGIPVISSSTGGDHGRKIEFWPVSGRARQHPLSGAETQKTVAMETRPVPAPKPVANDIEF
CCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCCCC
F
C
>Mature Secondary Structure
MMEAAAKRVHIIQGEYKVVSDPDVVMTTILGSCVAACLRDPVAGLGGMNHFLLPGTGNVT
CCCCHHHEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEECCCCCCC
GGDATRYGVHLMELLINGLLKQGARRDRLEAKVFGGAKTIASFSNVGEQNAIFAMQFLKD
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHC
EGIPVISSSTGGDHGRKIEFWPVSGRARQHPLSGAETQKTVAMETRPVPAPKPVANDIEF
CCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743194; 11743193