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The map label for this gene is yraN [C]

Identifier: 15887652

GI number: 15887652

Start: 296071

End: 296439

Strand: Direct

Name: yraN [C]

Synonym: Atu0303

Alternate gene names: 15887652

Gene position: 296071-296439 (Clockwise)

Preceding gene: 159184248

Following gene: 15887653

Centisome position: 10.42

GC content: 59.89

Gene sequence:

>369_bases
ATGGCCGTTGACGGGCAGAGCAATAAAAGGCGGAAAGCCGAGCGACGCGGCCATGCCGCCGAATATTGGGCCGCACTTTA
TCTGTTGCTAAAGGGATATCGCATCCTCGCCATTCGGTATCGAACCCGGCTCGGGGAAATCGATCTCATCGCCCGAAAGA
AGGATCTCATCGCCATCATCGAGGTCAAGGCGCGCGCTTCCGGTGGCAGCGCGGTGGATGCCGTCGGTTTTCATTCGCAG
CAGCGCATTCGGGCGGCTGCCGATCTCTGGCTCTCCCGCCGCAGGGATGCCGGCCGTTTTTCGCTGCGCTTCGATATTGT
CGCCGTTCTGCCACGACGCCTGCCGCAGCACTTTATCGACGCATTTTAA

Upstream 100 bases:

>100_bases
GCCACCATGTCCGCCGCCAAGGCTGCTGGCGAAGCGGCGAAGCTGACGGGCCTGCCGCGCAAGGAGCTTTATCAAAGGCT
GCTGGATATGAAGGACACGG

Downstream 100 bases:

>100_bases
AGGGGAGGGGAAGGCAATGTCCACTGAGCGGGAAAAGATGGCCGCGGGCGAATGGTACAGCTGCATGGGTGCCGAACTGG
ATATGCTGCGCTGGCATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MAVDGQSNKRRKAERRGHAAEYWAALYLLLKGYRILAIRYRTRLGEIDLIARKKDLIAIIEVKARASGGSAVDAVGFHSQ
QRIRAAADLWLSRRRDAGRFSLRFDIVAVLPRRLPQHFIDAF

Sequences:

>Translated_122_residues
MAVDGQSNKRRKAERRGHAAEYWAALYLLLKGYRILAIRYRTRLGEIDLIARKKDLIAIIEVKARASGGSAVDAVGFHSQ
QRIRAAADLWLSRRRDAGRFSLRFDIVAVLPRRLPQHFIDAF
>Mature_121_residues
AVDGQSNKRRKAERRGHAAEYWAALYLLLKGYRILAIRYRTRLGEIDLIARKKDLIAIIEVKARASGGSAVDAVGFHSQQ
RIRAAADLWLSRRRDAGRFSLRFDIVAVLPRRLPQHFIDAF

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y303_AGRT5 (Q8UIJ2)

Other databases:

- EMBL:   AE007869
- PIR:   AG2613
- PIR:   E97395
- RefSeq:   NP_353333.1
- ProteinModelPortal:   Q8UIJ2
- STRING:   Q8UIJ2
- GeneID:   1132341
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu0303
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   QRYDIVA
- ProtClustDB:   PRK12497
- BioCyc:   ATUM176299-1:ATU0303-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13944; Mature: 13813

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVDGQSNKRRKAERRGHAAEYWAALYLLLKGYRILAIRYRTRLGEIDLIARKKDLIAII
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCCEEECCCCEEEEE
EVKARASGGSAVDAVGFHSQQRIRAAADLWLSRRRDAGRFSLRFDIVAVLPRRLPQHFID
EEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHC
AF
CC
>Mature Secondary Structure 
AVDGQSNKRRKAERRGHAAEYWAALYLLLKGYRILAIRYRTRLGEIDLIARKKDLIAII
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCCEEECCCCEEEEE
EVKARASGGSAVDAVGFHSQQRIRAAADLWLSRRRDAGRFSLRFDIVAVLPRRLPQHFID
EEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHC
AF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194