| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995382
Identifier: 39995382
GI number: 39995382
Start: 280118
End: 280663
Strand: Direct
Name: 39995382
Synonym: GSU0272
Alternate gene names: NA
Gene position: 280118-280663 (Clockwise)
Preceding gene: 39995379
Following gene: 39995383
Centisome position: 7.34
GC content: 59.34
Gene sequence:
>546_bases ATGGGAATACCTGAAGACATACACCTGTTCGAGCAGAGCCTCAATGAGCTCGTCATCAAGTACGAGCAGTACTTCCTCGG TATCGAGAAGCGGGAACCCCTGCGTCTGCGGGAAACGGTCGACCGGTTGGCGCGCAAGCACTCAGCCGTGAAGATCGTCA ATACCATGCTCAACTTCAAGTATACCTCTCTTGTTTCCCGCTACGCCAGTTACCGCCAGTACTGGGACCGAATCCTCCGG CTCATGGAAGAAGGGAAGTACTCGCGGGACCGCTTCAGGATGGCGATCCACGAACGTTCATCACCGGAGGTGCGGCAGCA TGAACCCCCGCCTCCCAAGGATGAGGCGGAAGAGCTCTATCGCCAGTTCGTGGAGGCTCGCCGTTCCTGCAACCTTTCCA CGGACAAGGTCTCCCGCGATCAGGTCGCCGCGGCCATCGAACGCCAGAAGCCGGTCATCAAAGCCAAGTACGGCACCGAC CAGGTGGAATTCCGTGTGGTGGTGGAAGACGGCGTGCCCAAGATCAAGGCCCGTCCCCGCCGCTGA
Upstream 100 bases:
>100_bases ACGATGCCGAGGTTTCCAGTCAAGTGATTAACGTGGCGAAACCGCGAGCTTTCGCCTTTACACGGGATGGGTTCTAGAGT AGTCTTTTGCCGGAGAACCT
Downstream 100 bases:
>100_bases AGCGCCTTGTCTTCTCTTTTTCGGAGTCTGACGTGAAGGTTGTCCTTGTCGCCATTCATCCCTATCCCTCGCCCCAGGCC GTTCCCCTCGCCAATGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MGIPEDIHLFEQSLNELVIKYEQYFLGIEKREPLRLRETVDRLARKHSAVKIVNTMLNFKYTSLVSRYASYRQYWDRILR LMEEGKYSRDRFRMAIHERSSPEVRQHEPPPPKDEAEELYRQFVEARRSCNLSTDKVSRDQVAAAIERQKPVIKAKYGTD QVEFRVVVEDGVPKIKARPRR
Sequences:
>Translated_181_residues MGIPEDIHLFEQSLNELVIKYEQYFLGIEKREPLRLRETVDRLARKHSAVKIVNTMLNFKYTSLVSRYASYRQYWDRILR LMEEGKYSRDRFRMAIHERSSPEVRQHEPPPPKDEAEELYRQFVEARRSCNLSTDKVSRDQVAAAIERQKPVIKAKYGTD QVEFRVVVEDGVPKIKARPRR >Mature_180_residues GIPEDIHLFEQSLNELVIKYEQYFLGIEKREPLRLRETVDRLARKHSAVKIVNTMLNFKYTSLVSRYASYRQYWDRILRL MEEGKYSRDRFRMAIHERSSPEVRQHEPPPPKDEAEELYRQFVEARRSCNLSTDKVSRDQVAAAIERQKPVIKAKYGTDQ VEFRVVVEDGVPKIKARPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21553; Mature: 21422
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIPEDIHLFEQSLNELVIKYEQYFLGIEKREPLRLRETVDRLARKHSAVKIVNTMLNFK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YTSLVSRYASYRQYWDRILRLMEEGKYSRDRFRMAIHERSSPEVRQHEPPPPKDEAEELY HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH RQFVEARRSCNLSTDKVSRDQVAAAIERQKPVIKAKYGTDQVEFRVVVEDGVPKIKARPR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCCCCCCCCCC R C >Mature Secondary Structure GIPEDIHLFEQSLNELVIKYEQYFLGIEKREPLRLRETVDRLARKHSAVKIVNTMLNFK CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH YTSLVSRYASYRQYWDRILRLMEEGKYSRDRFRMAIHERSSPEVRQHEPPPPKDEAEELY HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH RQFVEARRSCNLSTDKVSRDQVAAAIERQKPVIKAKYGTDQVEFRVVVEDGVPKIKARPR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEECCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA