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The map label for this gene is bphB [H]

Identifier: 39995365

GI number: 39995365

Start: 263840

End: 265690

Strand: Direct

Name: bphB [H]

Synonym: GSU0255

Alternate gene names: 39995365

Gene position: 263840-265690 (Clockwise)

Preceding gene: 39995364

Following gene: 39995366

Centisome position: 6.92

GC content: 59.86

Gene sequence:

>1851_bases
ATGGCCGGCAGCAATCAGAATGTAGCGTTACGGATTACTGCGATCTATGCGCTCGTCGGCGTGTCATGGATTCTCTTTTC
CGATTGGCTGCTCTATCTCGCGGTTGGCGACCCTCATCTCCTCACGCGACTCCAGATGGGAAAGGGATGGGTGTACGTGG
CCGCGACCGCCATGCTCCTCTACTGGCTCGTCCACCGGGATACGGCGCAGATCAGTCGCTCCGAGGAAGATCTCCGGGTG
CGGAATGAAGAACTGACCGTGGTAGAGGAGGAACTCAGGCAGCAAAACGAAGAACTGATCGTGGCCGAGGAAGAACTTCG
GCAGCAGCTGACCGAGAACTACGAGAGCCAGAAAAAATTGTTCGAGGCACATCAGGCAATGGCAGCCATCCTCCAGGCGT
CACCGGTCGCCATCGTGGCGCTTGACAGGGAAGACAAGGTCGTGGTGTGGAACCGTGCCGCCGAGCGCCTCTTCGGCTGG
CTTGAGGGGGAGGTTCGGGGGACGCCCTTTTCCCTGCTCCACCCCGACGACACGAAAGATGAGGAGCGGGTCTGCGGGAG
CGCCTGCCAGGAGGCGGTCCTGCACGATATCGAAGGCGTGCGCATGAAGAAAAACGGAGAGTTGATCAGTGTCAGCATCT
CCACTGCGCCACTGCACGATCCTGCCGGGCTGAACGCCGGCGTGATCGCAATGTTCACCGACATCACCGACCGCAAGTCT
GCGGCTAAAAGTCTCAGAAAAAGCAACGAAAAGTATGTCGAACTGGTCAATGCCATCAGCGGCATCGTCTGGGAGCTTGA
CGTCGAGAGTTTTTGTTTCACGTTTGTCAGCCGGAGGTCAGAGGATATCCTGGGCTATCCCGCCGAGGCATGGCTGGCCG
AGCCGGGGTTCTGGGAGCGCTGCATCCACCCCGACGACCGCGCGTGGGTGCTTGCCGCCTGCCGCACGGCGCATGGCGAG
GGAACCAGCCATGAGTTGGAGTATCGCGGACTCGCCGCCGATGGCCACATTATCTGGCTGCGGAACTCATTCGTGGTTGT
CGAGGACACGAACGGCCACGTGAAGCTCCGCGGGGTCATGACCGATATCAGCCGGCGAAAGAATGCCGAGGATGAACTGT
CCAGACTCAATGCCGAGCTCGAACAACGGGTGGCGCAGCGAACGTCGGAGTTGGCGGCACTCAACCGGGAACTGGAAGCC
TTCAGCTATACGGTTTCCCACGATTTGCGGGCCCCCCTGCGCCACATCGAAGGGTTCGGCAGGGCTCTTCAGGAGGATTA
CTACGAGGCCTTTGACGATACGGGGAAATTACACTTGGCCCGGCTCTGTTCGGCAGCCAGAAAGATGGGGCAACTGATCG
ACGATCTGCTCCGCCTTGCCATGGTCAGCAAGGGGGAAATCAACCGGCGTCCCACCAATCTCAGCACGATCGCACATGGC
ATTGTGCAGGATCTGACGCTGTCTCAGCCGGAGCGCGCGGTTGCATTCCGGATAACCGACGGGATCGAGGTGAACGGCGA
TCCCCGGCTGCTGCAAGTCGTTATGGAGAATCTCCTCAGCAATGCATGGAAATACACGGGGAAGCGGCAGGATGCCGTTA
TAGAGTTCGGTGTGGGCGAGGATCGGGGGCGAACGGTCTTCTTTGTCAGGGACAACGGAGTTGGCTTTGCCAATGAACAT
GCCGAAAAAATCTTCAAGCCGTTCCTGAGGCTCCACAGCGCGGAGGACTATGAGGGGTCGGGCGTTGGTCTGGCAACGGT
GCGCCGTGTCGTGGAGCGCCATGGGGGGCGTGTGTGGGCGCAGGGCCGGGAAGGGCACGGCGCCGTGTTCTTCTTTACTC
TGGATAACTGA

Upstream 100 bases:

>100_bases
CCTGCAGTACCTGTCCCAACCGTGCCCATGTCCTTTGACATGTATACGCCGCTTCCGGCCCCGGAGCGGAATGATCCGGC
AAAACACAGGAGGAAGGAGC

Downstream 100 bases:

>100_bases
AGAAATGTTCCGCGCGGAGGCGATTGGCCCGGTTCGTGCTAAAATAACCCGCAACAACCATCCTGATTAACTAGTATAGT
GCACAGGTTCTGGAAAGGGG

Product: sensory box histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 615

Protein sequence:

>616_residues
MAGSNQNVALRITAIYALVGVSWILFSDWLLYLAVGDPHLLTRLQMGKGWVYVAATAMLLYWLVHRDTAQISRSEEDLRV
RNEELTVVEEELRQQNEELIVAEEELRQQLTENYESQKKLFEAHQAMAAILQASPVAIVALDREDKVVVWNRAAERLFGW
LEGEVRGTPFSLLHPDDTKDEERVCGSACQEAVLHDIEGVRMKKNGELISVSISTAPLHDPAGLNAGVIAMFTDITDRKS
AAKSLRKSNEKYVELVNAISGIVWELDVESFCFTFVSRRSEDILGYPAEAWLAEPGFWERCIHPDDRAWVLAACRTAHGE
GTSHELEYRGLAADGHIIWLRNSFVVVEDTNGHVKLRGVMTDISRRKNAEDELSRLNAELEQRVAQRTSELAALNRELEA
FSYTVSHDLRAPLRHIEGFGRALQEDYYEAFDDTGKLHLARLCSAARKMGQLIDDLLRLAMVSKGEINRRPTNLSTIAHG
IVQDLTLSQPERAVAFRITDGIEVNGDPRLLQVVMENLLSNAWKYTGKRQDAVIEFGVGEDRGRTVFFVRDNGVGFANEH
AEKIFKPFLRLHSAEDYEGSGVGLATVRRVVERHGGRVWAQGREGHGAVFFFTLDN

Sequences:

>Translated_616_residues
MAGSNQNVALRITAIYALVGVSWILFSDWLLYLAVGDPHLLTRLQMGKGWVYVAATAMLLYWLVHRDTAQISRSEEDLRV
RNEELTVVEEELRQQNEELIVAEEELRQQLTENYESQKKLFEAHQAMAAILQASPVAIVALDREDKVVVWNRAAERLFGW
LEGEVRGTPFSLLHPDDTKDEERVCGSACQEAVLHDIEGVRMKKNGELISVSISTAPLHDPAGLNAGVIAMFTDITDRKS
AAKSLRKSNEKYVELVNAISGIVWELDVESFCFTFVSRRSEDILGYPAEAWLAEPGFWERCIHPDDRAWVLAACRTAHGE
GTSHELEYRGLAADGHIIWLRNSFVVVEDTNGHVKLRGVMTDISRRKNAEDELSRLNAELEQRVAQRTSELAALNRELEA
FSYTVSHDLRAPLRHIEGFGRALQEDYYEAFDDTGKLHLARLCSAARKMGQLIDDLLRLAMVSKGEINRRPTNLSTIAHG
IVQDLTLSQPERAVAFRITDGIEVNGDPRLLQVVMENLLSNAWKYTGKRQDAVIEFGVGEDRGRTVFFVRDNGVGFANEH
AEKIFKPFLRLHSAEDYEGSGVGLATVRRVVERHGGRVWAQGREGHGAVFFFTLDN
>Mature_615_residues
AGSNQNVALRITAIYALVGVSWILFSDWLLYLAVGDPHLLTRLQMGKGWVYVAATAMLLYWLVHRDTAQISRSEEDLRVR
NEELTVVEEELRQQNEELIVAEEELRQQLTENYESQKKLFEAHQAMAAILQASPVAIVALDREDKVVVWNRAAERLFGWL
EGEVRGTPFSLLHPDDTKDEERVCGSACQEAVLHDIEGVRMKKNGELISVSISTAPLHDPAGLNAGVIAMFTDITDRKSA
AKSLRKSNEKYVELVNAISGIVWELDVESFCFTFVSRRSEDILGYPAEAWLAEPGFWERCIHPDDRAWVLAACRTAHGEG
TSHELEYRGLAADGHIIWLRNSFVVVEDTNGHVKLRGVMTDISRRKNAEDELSRLNAELEQRVAQRTSELAALNRELEAF
SYTVSHDLRAPLRHIEGFGRALQEDYYEAFDDTGKLHLARLCSAARKMGQLIDDLLRLAMVSKGEINRRPTNLSTIAHGI
VQDLTLSQPERAVAFRITDGIEVNGDPRLLQVVMENLLSNAWKYTGKRQDAVIEFGVGEDRGRTVFFVRDNGVGFANEHA
EKIFKPFLRLHSAEDYEGSGVGLATVRRVVERHGGRVWAQGREGHGAVFFFTLDN

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=269, Percent_Identity=24.907063197026, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=28.2700421940928, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1786600, Length=241, Percent_Identity=28.2157676348548, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI145693157, Length=279, Percent_Identity=26.8817204301075, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1786912, Length=262, Percent_Identity=31.2977099236641, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788393, Length=240, Percent_Identity=28.3333333333333, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790346, Length=263, Percent_Identity=26.615969581749, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786783, Length=226, Percent_Identity=28.7610619469027, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1789149, Length=266, Percent_Identity=24.0601503759398, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1787894, Length=214, Percent_Identity=27.5700934579439, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1790551, Length=218, Percent_Identity=28.8990825688073, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1790861, Length=207, Percent_Identity=25.1207729468599, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 69316; Mature: 69185

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSNQNVALRITAIYALVGVSWILFSDWLLYLAVGDPHLLTRLQMGKGWVYVAATAMLL
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCCCHHHHHHHHHH
YWLVHRDTAQISRSEEDLRVRNEELTVVEEELRQQNEELIVAEEELRQQLTENYESQKKL
HHHHHCCHHHHCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHH
FEAHQAMAAILQASPVAIVALDREDKVVVWNRAAERLFGWLEGEVRGTPFSLLHPDDTKD
HHHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHHHHHHCCCCCCCCEEEECCCCCCH
EERVCGSACQEAVLHDIEGVRMKKNGELISVSISTAPLHDPAGLNAGVIAMFTDITDRKS
HHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHH
AAKSLRKSNEKYVELVNAISGIVWELDVESFCFTFVSRRSEDILGYPAEAWLAEPGFWER
HHHHHHHCCHHHHHHHHHHHCEEEEECHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHH
CIHPDDRAWVLAACRTAHGEGTSHELEYRGLAADGHIIWLRNSFVVVEDTNGHVKLRGVM
CCCCCCCCEEEEEHHHCCCCCCCCCEEEEEEECCCEEEEEECCEEEEECCCCEEEEEEHH
TDISRRKNAEDELSRLNAELEQRVAQRTSELAALNRELEAFSYTVSHDLRAPLRHIEGFG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHH
RALQEDYYEAFDDTGKLHLARLCSAARKMGQLIDDLLRLAMVSKGEINRRPTNLSTIAHG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
IVQDLTLSQPERAVAFRITDGIEVNGDPRLLQVVMENLLSNAWKYTGKRQDAVIEFGVGE
HHHHHCCCCCCCEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
DRGRTVFFVRDNGVGFANEHAEKIFKPFLRLHSAEDYEGSGVGLATVRRVVERHGGRVWA
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
QGREGHGAVFFFTLDN
CCCCCCCEEEEEEECC
>Mature Secondary Structure 
AGSNQNVALRITAIYALVGVSWILFSDWLLYLAVGDPHLLTRLQMGKGWVYVAATAMLL
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCCCHHHHHHHHHH
YWLVHRDTAQISRSEEDLRVRNEELTVVEEELRQQNEELIVAEEELRQQLTENYESQKKL
HHHHHCCHHHHCCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHH
FEAHQAMAAILQASPVAIVALDREDKVVVWNRAAERLFGWLEGEVRGTPFSLLHPDDTKD
HHHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHHHHHHCCCCCCCCEEEECCCCCCH
EERVCGSACQEAVLHDIEGVRMKKNGELISVSISTAPLHDPAGLNAGVIAMFTDITDRKS
HHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCHHHHH
AAKSLRKSNEKYVELVNAISGIVWELDVESFCFTFVSRRSEDILGYPAEAWLAEPGFWER
HHHHHHHCCHHHHHHHHHHHCEEEEECHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHH
CIHPDDRAWVLAACRTAHGEGTSHELEYRGLAADGHIIWLRNSFVVVEDTNGHVKLRGVM
CCCCCCCCEEEEEHHHCCCCCCCCCEEEEEEECCCEEEEEECCEEEEECCCCEEEEEEHH
TDISRRKNAEDELSRLNAELEQRVAQRTSELAALNRELEAFSYTVSHDLRAPLRHIEGFG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHH
RALQEDYYEAFDDTGKLHLARLCSAARKMGQLIDDLLRLAMVSKGEINRRPTNLSTIAHG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
IVQDLTLSQPERAVAFRITDGIEVNGDPRLLQVVMENLLSNAWKYTGKRQDAVIEFGVGE
HHHHHCCCCCCCEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
DRGRTVFFVRDNGVGFANEHAEKIFKPFLRLHSAEDYEGSGVGLATVRRVVERHGGRVWA
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
QGREGHGAVFFFTLDN
CCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]