| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is yjlA [H]
Identifier: 39995359
GI number: 39995359
Start: 256943
End: 257920
Strand: Direct
Name: yjlA [H]
Synonym: GSU0249
Alternate gene names: 39995359
Gene position: 256943-257920 (Clockwise)
Preceding gene: 39995358
Following gene: 39995360
Centisome position: 6.74
GC content: 62.88
Gene sequence:
>978_bases ATGACCCGTTTGATTGTCTTCGGAATACTTGCGGCATTCTTCTTCAGCAGCACGTTCGTGCTCAACCGGGCCATGAGCCT GGAGGGAGGGCACTGGGCATGGACCGCGAGCCTGCGCTACGGATACATGCTGCTTCTGCTCTGCACCTGGTTGCTGCTGA AAGGACGACGGGGGGTACTGATTGCTGCATGGGACGCCTTTCGCCGGAATTGGCTGTTCTGGACCACGGCGGGAAGTGTC GGCTGCGGGGCGTTTTACGCCCTGATCTCCTTCAGCGCGTCGTTCGCTCCCGGCTGGGTGGTGGCAACCACCTGGCAGAT TACCATCCTCGCGACACCGGTGGTGCTCCTGCTGTTCGGCCGCCGGGTGCCGGCCAGGGGGGTGTTGTTCACTGCCATGA TTTTTCTCGGCATTGTGCTGGTTACCCTTGAGCAGGCAACCGCCGCTCCGCTGGGCGACATCCTGCGGGGGGTAGTGCCG GTTGTGGCCGCGGCATTCGCCTATCCCCTGGGCAACCAGATGGTGTGGGAGGCCCGCCATGGGACATCTTCTCTGCTGCC GGCCATAACGGACCCCGTCGTCGACGACAGCTTCGGGAGGGTACTGCTCATGGTGCTCGGCTCGATCCCCTTCTGGGTCG TGCTGCTCATCGTGGCAGCGCCCCCGCCCCCCTCGCCCGGTCAGTTGGTCAACACGGCCCTGGTGGCGGTGTTTTCCGGC GTCATTGCCACGAGCCTGTTTCTTCATGCCCGGCATTGCGCGTCAACTACCTACGAACTTGCCGCCATTGATGCGACCCA ATCGACCGAGGTTATTTTTTCGCTTCTAGGGGAGATCGTCTTTCTCCATGGCGCACTGCCGGGCTCGTCGGGCACCGCGG GGCTGGTGCTGGTCGTCGGCGGGCTCATGCTGTATGTCCGGGCCCAGACCGCGGGTCCGCTTAAAGAAATGGTTCACAGC CGGGCAGAGAAAGGGTAA
Upstream 100 bases:
>100_bases CAAGGGACCAAACGACCTGCTGGAGGATGGGGCGCCGTAGGGCACCGTTCTCCTCTCGATCCGATGCGTACCCTGCCGGC ATGAGGATGGAACGTCTGCC
Downstream 100 bases:
>100_bases TAATGATCACGGATGGAATTCATCCCCGGGGGAGATGCCGGCATAATGCAGCCAGAGCCCGTCGTTTCGAACATTGCCCA TGTCATCCAGATGTCTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTRLIVFGILAAFFFSSTFVLNRAMSLEGGHWAWTASLRYGYMLLLLCTWLLLKGRRGVLIAAWDAFRRNWLFWTTAGSV GCGAFYALISFSASFAPGWVVATTWQITILATPVVLLLFGRRVPARGVLFTAMIFLGIVLVTLEQATAAPLGDILRGVVP VVAAAFAYPLGNQMVWEARHGTSSLLPAITDPVVDDSFGRVLLMVLGSIPFWVVLLIVAAPPPPSPGQLVNTALVAVFSG VIATSLFLHARHCASTTYELAAIDATQSTEVIFSLLGEIVFLHGALPGSSGTAGLVLVVGGLMLYVRAQTAGPLKEMVHS RAEKG
Sequences:
>Translated_325_residues MTRLIVFGILAAFFFSSTFVLNRAMSLEGGHWAWTASLRYGYMLLLLCTWLLLKGRRGVLIAAWDAFRRNWLFWTTAGSV GCGAFYALISFSASFAPGWVVATTWQITILATPVVLLLFGRRVPARGVLFTAMIFLGIVLVTLEQATAAPLGDILRGVVP VVAAAFAYPLGNQMVWEARHGTSSLLPAITDPVVDDSFGRVLLMVLGSIPFWVVLLIVAAPPPPSPGQLVNTALVAVFSG VIATSLFLHARHCASTTYELAAIDATQSTEVIFSLLGEIVFLHGALPGSSGTAGLVLVVGGLMLYVRAQTAGPLKEMVHS RAEKG >Mature_324_residues TRLIVFGILAAFFFSSTFVLNRAMSLEGGHWAWTASLRYGYMLLLLCTWLLLKGRRGVLIAAWDAFRRNWLFWTTAGSVG CGAFYALISFSASFAPGWVVATTWQITILATPVVLLLFGRRVPARGVLFTAMIFLGIVLVTLEQATAAPLGDILRGVVPV VAAAFAYPLGNQMVWEARHGTSSLLPAITDPVVDDSFGRVLLMVLGSIPFWVVLLIVAAPPPPSPGQLVNTALVAVFSGV IATSLFLHARHCASTTYELAAIDATQSTEVIFSLLGEIVFLHGALPGSSGTAGLVLVVGGLMLYVRAQTAGPLKEMVHSR AEKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34750; Mature: 34618
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLIVFGILAAFFFSSTFVLNRAMSLEGGHWAWTASLRYGYMLLLLCTWLLLKGRRGVL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEE IAAWDAFRRNWLFWTTAGSVGCGAFYALISFSASFAPGWVVATTWQITILATPVVLLLFG EEEEHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHHHHHHHHHC RRVPARGVLFTAMIFLGIVLVTLEQATAAPLGDILRGVVPVVAAAFAYPLGNQMVWEARH CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECC GTSSLLPAITDPVVDDSFGRVLLMVLGSIPFWVVLLIVAAPPPPSPGQLVNTALVAVFSG CCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH VIATSLFLHARHCASTTYELAAIDATQSTEVIFSLLGEIVFLHGALPGSSGTAGLVLVVG HHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH GLMLYVRAQTAGPLKEMVHSRAEKG HHHHHHHCCCCCHHHHHHHHHCCCC >Mature Secondary Structure TRLIVFGILAAFFFSSTFVLNRAMSLEGGHWAWTASLRYGYMLLLLCTWLLLKGRRGVL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEE IAAWDAFRRNWLFWTTAGSVGCGAFYALISFSASFAPGWVVATTWQITILATPVVLLLFG EEEEHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHHHHHHHHHC RRVPARGVLFTAMIFLGIVLVTLEQATAAPLGDILRGVVPVVAAAFAYPLGNQMVWEARH CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECC GTSSLLPAITDPVVDDSFGRVLLMVLGSIPFWVVLLIVAAPPPPSPGQLVNTALVAVFSG CCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH VIATSLFLHARHCASTTYELAAIDATQSTEVIFSLLGEIVFLHGALPGSSGTAGLVLVVG HHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH GLMLYVRAQTAGPLKEMVHSRAEKG HHHHHHHCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]