Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is 39995358

Identifier: 39995358

GI number: 39995358

Start: 255596

End: 256882

Strand: Direct

Name: 39995358

Synonym: GSU0248

Alternate gene names: NA

Gene position: 255596-256882 (Clockwise)

Preceding gene: 39995357

Following gene: 39995359

Centisome position: 6.7

GC content: 67.91

Gene sequence:

>1287_bases
ATGTCCCGTTCCCCTCGGCTGCTGCTGATCTACCCGGCGACCCACAAGCTCGGTTGGGCGCGCTATTTTCAGCTTCCCTC
CCATTCGCTCCAGATGGTGGCCGCGGCCACGCCCCGCCACTGGGAGGTGATCCTGGCCGACGAGGTCCATGACGAGGTCC
CCTTTGACGGAACCTTCGACCTGGTGGGGATCACGGCCATGACCCACCAGGCGACGCGGGCCTATGAGATCGCCGACCGG
TTCCGGGCCCGGGGTGTCCCCGTGGTGATGGGGGGAATCCACCCCACGGTCCTGCCCGACGAGGCACTGGAGCACGCCGA
CGCGGTGGTGGTGGGGGAGGCCGAGCCGGTCTGGGCGCACCTTCTCGACGACCTCCTGGCCGGGCGGCTCGCACCGGTCT
ACCGGGCGCCGGTCCCCACGGACGAAATCCTCTCCGCCCCCTGGCCCCGCCGCGAGATCCTGGCTGGCCGCCGCTACCTC
ACCACCCAGACGGTCCAGGCGAGCCGGGGCTGCCCCTACGACTGCTCCTTCTGCACCGTCACTCCCTACTTCGGCCGCAC
CTTCCGCTACCGCGACCCCGACGACATCCTGGCAGAGATTCGCTCCTTCAGACGCAAGCTCGTGGTCTTTCTCGACGACA
ACCTCCTGGGCGATCCGGCCAAGGCCCGGCCCATCCTGCGGGGGCTGGCCGAGATGAACGTCCGCTGGGGCTCCCAGACC
AATCTCCGTTTTGCCGAGGACCCGGAGCTCCTGAAACTCGTGGCGGACTCGGGGTGCATCGGCCTCTTCGTGGGGATCGA
GTCGGTGACCGGGGCCCACGCCAACATGGCCAAGTCCGGCACCCGTTACTCCCAGGCCGATCTCATGAAGCGGGTCCGCG
ACGCCGGCATCATCCTGGAAACCTCCATCATCTTCGGTTTCGACGACCACGACGAGAGCGTCTTCGAGACCACGGTCCGC
TTCCTGGAGGAGTGCTCCCCCAGCGTCCCCACCTTCCACATCCTCACCCCCTACCCCGGCACGGCCCTGTTCCGCCAGTT
CCAGGAGGAGGGGCGGCTCCTGACCACCGACTGGTCCCGTTACGATCACTCTACCGTGGTCTTCCGGCCCCGTCTCATGT
CTCCCGAACGGCTTCACCGGGGCTGGCTGGAGGCACGCCGTGAGGCCTACTCCTGGCGGGCCATCGCCACCCGCGTCATG
CGCAATCCGGGGCGCCGCCTGACGAATTTCGCCTACAACATGCTGCGCAAGGGACCAAACGACCTGCTGGAGGATGGGGC
GCCGTAG

Upstream 100 bases:

>100_bases
AGCCCGAGGCCTATCTCAGGGAGTACGAGGCGACCCGGCCCCGGACAACGGAGCCCCTGGTGGATTTCAGCGCCGGGGCG
TACTGCGGGGGAGCCGCCTG

Downstream 100 bases:

>100_bases
GGCACCGTTCTCCTCTCGATCCGATGCGTACCCTGCCGGCATGAGGATGGAACGTCTGCCATGACCCGTTTGATTGTCTT
CGGAATACTTGCGGCATTCT

Product: BchE/P-methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSRSPRLLLIYPATHKLGWARYFQLPSHSLQMVAAATPRHWEVILADEVHDEVPFDGTFDLVGITAMTHQATRAYEIADR
FRARGVPVVMGGIHPTVLPDEALEHADAVVVGEAEPVWAHLLDDLLAGRLAPVYRAPVPTDEILSAPWPRREILAGRRYL
TTQTVQASRGCPYDCSFCTVTPYFGRTFRYRDPDDILAEIRSFRRKLVVFLDDNLLGDPAKARPILRGLAEMNVRWGSQT
NLRFAEDPELLKLVADSGCIGLFVGIESVTGAHANMAKSGTRYSQADLMKRVRDAGIILETSIIFGFDDHDESVFETTVR
FLEECSPSVPTFHILTPYPGTALFRQFQEEGRLLTTDWSRYDHSTVVFRPRLMSPERLHRGWLEARREAYSWRAIATRVM
RNPGRRLTNFAYNMLRKGPNDLLEDGAP

Sequences:

>Translated_428_residues
MSRSPRLLLIYPATHKLGWARYFQLPSHSLQMVAAATPRHWEVILADEVHDEVPFDGTFDLVGITAMTHQATRAYEIADR
FRARGVPVVMGGIHPTVLPDEALEHADAVVVGEAEPVWAHLLDDLLAGRLAPVYRAPVPTDEILSAPWPRREILAGRRYL
TTQTVQASRGCPYDCSFCTVTPYFGRTFRYRDPDDILAEIRSFRRKLVVFLDDNLLGDPAKARPILRGLAEMNVRWGSQT
NLRFAEDPELLKLVADSGCIGLFVGIESVTGAHANMAKSGTRYSQADLMKRVRDAGIILETSIIFGFDDHDESVFETTVR
FLEECSPSVPTFHILTPYPGTALFRQFQEEGRLLTTDWSRYDHSTVVFRPRLMSPERLHRGWLEARREAYSWRAIATRVM
RNPGRRLTNFAYNMLRKGPNDLLEDGAP
>Mature_427_residues
SRSPRLLLIYPATHKLGWARYFQLPSHSLQMVAAATPRHWEVILADEVHDEVPFDGTFDLVGITAMTHQATRAYEIADRF
RARGVPVVMGGIHPTVLPDEALEHADAVVVGEAEPVWAHLLDDLLAGRLAPVYRAPVPTDEILSAPWPRREILAGRRYLT
TQTVQASRGCPYDCSFCTVTPYFGRTFRYRDPDDILAEIRSFRRKLVVFLDDNLLGDPAKARPILRGLAEMNVRWGSQTN
LRFAEDPELLKLVADSGCIGLFVGIESVTGAHANMAKSGTRYSQADLMKRVRDAGIILETSIIFGFDDHDESVFETTVRF
LEECSPSVPTFHILTPYPGTALFRQFQEEGRLLTTDWSRYDHSTVVFRPRLMSPERLHRGWLEARREAYSWRAIATRVMR
NPGRRLTNFAYNMLRKGPNDLLEDGAP

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 48448; Mature: 48317

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSPRLLLIYPATHKLGWARYFQLPSHSLQMVAAATPRHWEVILADEVHDEVPFDGTFD
CCCCCCEEEEECCCCCCCHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCH
LVGITAMTHQATRAYEIADRFRARGVPVVMGGIHPTVLPDEALEHADAVVVGEAEPVWAH
HEEHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHCCEEEECCCCHHHHH
LLDDLLAGRLAPVYRAPVPTDEILSAPWPRREILAGRRYLTTQTVQASRGCPYDCSFCTV
HHHHHHHHHCCHHHCCCCCHHHHHCCCCCHHHHHCCCCEEEEHHHHHCCCCCCCCCEEEE
TPYFGRTFRYRDPDDILAEIRSFRRKLVVFLDDNLLGDPAKARPILRGLAEMNVRWGSQT
CCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHCEECCCCC
NLRFAEDPELLKLVADSGCIGLFVGIESVTGAHANMAKSGTRYSQADLMKRVRDAGIILE
CCEECCCHHHHHHHHCCCCEEEEEEHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCEEEE
TSIIFGFDDHDESVFETTVRFLEECSPSVPTFHILTPYPGTALFRQFQEEGRLLTTDWSR
EEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEECCCC
YDHSTVVFRPRLMSPERLHRGWLEARREAYSWRAIATRVMRNPGRRLTNFAYNMLRKGPN
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCH
DLLEDGAP
HHHHCCCC
>Mature Secondary Structure 
SRSPRLLLIYPATHKLGWARYFQLPSHSLQMVAAATPRHWEVILADEVHDEVPFDGTFD
CCCCCEEEEECCCCCCCHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCH
LVGITAMTHQATRAYEIADRFRARGVPVVMGGIHPTVLPDEALEHADAVVVGEAEPVWAH
HEEHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHCCEEEECCCCHHHHH
LLDDLLAGRLAPVYRAPVPTDEILSAPWPRREILAGRRYLTTQTVQASRGCPYDCSFCTV
HHHHHHHHHCCHHHCCCCCHHHHHCCCCCHHHHHCCCCEEEEHHHHHCCCCCCCCCEEEE
TPYFGRTFRYRDPDDILAEIRSFRRKLVVFLDDNLLGDPAKARPILRGLAEMNVRWGSQT
CCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHCEECCCCC
NLRFAEDPELLKLVADSGCIGLFVGIESVTGAHANMAKSGTRYSQADLMKRVRDAGIILE
CCEECCCHHHHHHHHCCCCEEEEEEHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCEEEE
TSIIFGFDDHDESVFETTVRFLEECSPSVPTFHILTPYPGTALFRQFQEEGRLLTTDWSR
EEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEECCCC
YDHSTVVFRPRLMSPERLHRGWLEARREAYSWRAIATRVMRNPGRRLTNFAYNMLRKGPN
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCH
DLLEDGAP
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]