| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is pckG
Identifier: 38234723
GI number: 38234723
Start: 2256423
End: 2258261
Strand: Reverse
Name: pckG
Synonym: DIP2180
Alternate gene names: 38234723
Gene position: 2258261-2256423 (Counterclockwise)
Preceding gene: 38234729
Following gene: 38234721
Centisome position: 90.74
GC content: 59.22
Gene sequence:
>1839_bases ATGTCCACCGTGTCCATTAAGGGCCTTGAGGGTGAAGCACCCACCAAAAATGAAGTACTGCTGAATTGGATTGCGGAAAA CGTCGAGCTTTTCCAGCCGGACCGAGTTGTTTTTGCTGACGGATCCCAAGAGGAATGGGACCGCCTGACAACTCAATTGG TAGAGTCCGGTACTCTCATCCGTCTCAATGAAGAGAAGCGCCCCAATAGCTTCTTGGCTCGTTCCAACCCAGCCGACGTT GCCCGGGTGGAGTCCCGTACCTTCATCTGTACCCCAACCCCAGAAGGTGCAGGTCCTACCAACCACTGGGCAGACCCAGC GGAAATGAAAGCCGAGCTCACCGAGCGTTTCCGTGGCTCCATGAAGGGCCGCACCATGTACGTCGTTCCTTTCTGCATGG GCCCTATCAACGACCCAGCCCCCAAGCTAGGCGTACAGCTCACCGACTCCGAGTACGTTGTGCTCTCCATGCGCATCATG ACCCGCATGGGCGCAGAAGCACTGGCCAAGATCGGCGACACCGGCTCCTTCGTTCCATGCCTGCACTCCGTGGGCGCACC TCTGGAACCGGGCCAAGAAGATGTGGCATGGCCATGCAACGAGGAAAAATACATCACCCACTTCCCAGAAACCAAGGAAA TCTGGTCCTACGGCTCCGGCTACGGCGGAAACGCCATCTTGGCTAAGAAGTGCTACGCCCTGCGTATCGCCTCCGTCATG GCAAAGGAAGAGGGCTGGATGGCTGAGCACATGCTCATTCTGAAACTCACCTCCCCAGAAAAGAAGGTCTACTACATCGC CGCTGCCTTCCCATCGGCATGTGGCAAGACCAACCTCGCTATGCTCCAGCCCACTATCGACGGCTGGTCCGCCGAAGTCG TTGGCGACGACATCGCATGGCTGCGCTTCGGTGAAGACGGCCGCCTCTACGCCATCAACCCAGAAAACGGCTTCTTCGGT GTTGCTCCTGGCACCAACTACTCCTCCAACCCCAACGCTATGCGCACCATGGAACCAGGCAACACCTTGTTCACCAACGT TGCGCTTACCGACGACGGCGACATCTGGTGGGAAGACCTGGAGAACATGCCAGAGCACCTCACTGACTGGTTGGGCAACG ACTGGACCCCAGAAAGCAGCCAGCCATCCAGCCACCCGAACTCCCGCTATTGCGTCCCGCTGGCACAGTGCCCAGTCGCC GCAGAAGAGTACAACGACCCACAGGGCGTGCCGATCTCTGCAATCTTGTTCGGTGGCCGCCGCCCAGACACCGTCCCGCT GGTATCCCAGGCGCACAACTGGGATCATGCCACCATGATCGGTGCCCTGCTGTCCTCCGGTCAGACCGCCGCCGCAGAAG GCACCGTCGGCGCACTACGCCACGATCCCATGGCCATGCTGCCATTCATTGGCTACAACGCAGCGGATTACCTACAGCAT TGGATTGACATGGGCAAGAAGGGCGGCGACAAGATGCCTGAGGTATTCTTGGTCAACTGGTTCCGCCGTGGCGACGACGG ACGCTTCCTGTGGCCAGGCTTCGGCGACAACAGCCGCGTTCTCAAGTGGATCGTTGACCGCATTGAAGGCCGCGTCGAAG CAGACGAAACCATCGCCGGCTACACCGCCCGCGTGGAAGACTTGGACCTCACCGGCCTAGACACCCCAATCGAGGACATC CGCGAGGCACTGTCCGCTCCAGCCGCACAATGGAAGAGCGACCTTGCCGACAACGAGGAATACCTCACGTTCCTAGGCTC TAAGGGCTCCGCGGTTCCGGCTGAGGTCCTCGAACAATTCGAGGCACTCAAAGCTCGCGTAGCAGCAGCTGAATCCTAA
Upstream 100 bases:
>100_bases GTGTATCTCCCACTGCATTGTCATTTGCTGTTCATCTTCTGGCTACTGTGTGGGGTGGAAGAACTGTCAATTGACACGCG AAACTATGTCAGGAGAAGCG
Downstream 100 bases:
>100_bases AGCAGTACCCCCAAGGTGGCTTCCTTACGTAAGGAAGCCACCTTTTTGTATCACCAGCACTAGGTTGCTCACCAAAAACT CCCGCAGCACCGGCACCCGA
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase
Number of amino acids: Translated: 612; Mature: 611
Protein sequence:
>612_residues MSTVSIKGLEGEAPTKNEVLLNWIAENVELFQPDRVVFADGSQEEWDRLTTQLVESGTLIRLNEEKRPNSFLARSNPADV ARVESRTFICTPTPEGAGPTNHWADPAEMKAELTERFRGSMKGRTMYVVPFCMGPINDPAPKLGVQLTDSEYVVLSMRIM TRMGAEALAKIGDTGSFVPCLHSVGAPLEPGQEDVAWPCNEEKYITHFPETKEIWSYGSGYGGNAILAKKCYALRIASVM AKEEGWMAEHMLILKLTSPEKKVYYIAAAFPSACGKTNLAMLQPTIDGWSAEVVGDDIAWLRFGEDGRLYAINPENGFFG VAPGTNYSSNPNAMRTMEPGNTLFTNVALTDDGDIWWEDLENMPEHLTDWLGNDWTPESSQPSSHPNSRYCVPLAQCPVA AEEYNDPQGVPISAILFGGRRPDTVPLVSQAHNWDHATMIGALLSSGQTAAAEGTVGALRHDPMAMLPFIGYNAADYLQH WIDMGKKGGDKMPEVFLVNWFRRGDDGRFLWPGFGDNSRVLKWIVDRIEGRVEADETIAGYTARVEDLDLTGLDTPIEDI REALSAPAAQWKSDLADNEEYLTFLGSKGSAVPAEVLEQFEALKARVAAAES
Sequences:
>Translated_612_residues MSTVSIKGLEGEAPTKNEVLLNWIAENVELFQPDRVVFADGSQEEWDRLTTQLVESGTLIRLNEEKRPNSFLARSNPADV ARVESRTFICTPTPEGAGPTNHWADPAEMKAELTERFRGSMKGRTMYVVPFCMGPINDPAPKLGVQLTDSEYVVLSMRIM TRMGAEALAKIGDTGSFVPCLHSVGAPLEPGQEDVAWPCNEEKYITHFPETKEIWSYGSGYGGNAILAKKCYALRIASVM AKEEGWMAEHMLILKLTSPEKKVYYIAAAFPSACGKTNLAMLQPTIDGWSAEVVGDDIAWLRFGEDGRLYAINPENGFFG VAPGTNYSSNPNAMRTMEPGNTLFTNVALTDDGDIWWEDLENMPEHLTDWLGNDWTPESSQPSSHPNSRYCVPLAQCPVA AEEYNDPQGVPISAILFGGRRPDTVPLVSQAHNWDHATMIGALLSSGQTAAAEGTVGALRHDPMAMLPFIGYNAADYLQH WIDMGKKGGDKMPEVFLVNWFRRGDDGRFLWPGFGDNSRVLKWIVDRIEGRVEADETIAGYTARVEDLDLTGLDTPIEDI REALSAPAAQWKSDLADNEEYLTFLGSKGSAVPAEVLEQFEALKARVAAAES >Mature_611_residues STVSIKGLEGEAPTKNEVLLNWIAENVELFQPDRVVFADGSQEEWDRLTTQLVESGTLIRLNEEKRPNSFLARSNPADVA RVESRTFICTPTPEGAGPTNHWADPAEMKAELTERFRGSMKGRTMYVVPFCMGPINDPAPKLGVQLTDSEYVVLSMRIMT RMGAEALAKIGDTGSFVPCLHSVGAPLEPGQEDVAWPCNEEKYITHFPETKEIWSYGSGYGGNAILAKKCYALRIASVMA KEEGWMAEHMLILKLTSPEKKVYYIAAAFPSACGKTNLAMLQPTIDGWSAEVVGDDIAWLRFGEDGRLYAINPENGFFGV APGTNYSSNPNAMRTMEPGNTLFTNVALTDDGDIWWEDLENMPEHLTDWLGNDWTPESSQPSSHPNSRYCVPLAQCPVAA EEYNDPQGVPISAILFGGRRPDTVPLVSQAHNWDHATMIGALLSSGQTAAAEGTVGALRHDPMAMLPFIGYNAADYLQHW IDMGKKGGDKMPEVFLVNWFRRGDDGRFLWPGFGDNSRVLKWIVDRIEGRVEADETIAGYTARVEDLDLTGLDTPIEDIR EALSAPAAQWKSDLADNEEYLTFLGSKGSAVPAEVLEQFEALKARVAAAES
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family
Homologues:
Organism=Homo sapiens, GI66346721, Length=616, Percent_Identity=50.8116883116883, Blast_Score=598, Evalue=1e-171, Organism=Homo sapiens, GI187281517, Length=620, Percent_Identity=48.0645161290323, Blast_Score=589, Evalue=1e-168, Organism=Homo sapiens, GI66346723, Length=386, Percent_Identity=53.6269430051813, Blast_Score=390, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17555492, Length=627, Percent_Identity=48.4848484848485, Blast_Score=571, Evalue=1e-163, Organism=Caenorhabditis elegans, GI71989645, Length=602, Percent_Identity=49.6677740863787, Blast_Score=569, Evalue=1e-162, Organism=Caenorhabditis elegans, GI71989658, Length=601, Percent_Identity=49.4176372712146, Blast_Score=568, Evalue=1e-162, Organism=Caenorhabditis elegans, GI71989653, Length=594, Percent_Identity=49.4949494949495, Blast_Score=559, Evalue=1e-159, Organism=Caenorhabditis elegans, GI32564411, Length=546, Percent_Identity=51.4652014652015, Blast_Score=548, Evalue=1e-156, Organism=Caenorhabditis elegans, GI32564407, Length=535, Percent_Identity=51.0280373831776, Blast_Score=521, Evalue=1e-148, Organism=Caenorhabditis elegans, GI71989649, Length=501, Percent_Identity=50.6986027944112, Blast_Score=502, Evalue=1e-142, Organism=Caenorhabditis elegans, GI32564409, Length=371, Percent_Identity=49.0566037735849, Blast_Score=345, Evalue=4e-95, Organism=Caenorhabditis elegans, GI17540956, Length=463, Percent_Identity=24.8380129589633, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24655085, Length=598, Percent_Identity=51.1705685618729, Blast_Score=607, Evalue=1e-174, Organism=Drosophila melanogaster, GI24655082, Length=613, Percent_Identity=49.9184339314845, Blast_Score=582, Evalue=1e-166, Organism=Drosophila melanogaster, GI161077226, Length=571, Percent_Identity=51.3134851138354, Blast_Score=560, Evalue=1e-160, Organism=Drosophila melanogaster, GI24655088, Length=503, Percent_Identity=51.8886679920477, Blast_Score=536, Evalue=1e-152,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PCKG_CORDI (Q6NET5)
Other databases:
- EMBL: BX248360 - RefSeq: NP_940490.1 - ProteinModelPortal: Q6NET5 - SMR: Q6NET5 - GeneID: 2648926 - GenomeReviews: BX248353_GR - KEGG: cdi:DIP2180 - NMPDR: fig|257309.1.peg.2081 - HOGENOM: HBG484437 - OMA: WILERVE - ProtClustDB: PRK04210 - BioCyc: CDIP257309:DIP2180-MONOMER - BRENDA: 4.1.1.32 - GO: GO:0005737 - GO: GO:0006094 - HAMAP: MF_00452 - InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 - Gene3D: G3DSA:3.90.228.20 - Gene3D: G3DSA:3.40.449.10 - PANTHER: PTHR11561 - PIRSF: PIRSF001348
Pfam domain/function: PF00821 PEPCK; SSF68923 PEP_carboxykinase_N
EC number: =4.1.1.32
Molecular weight: Translated: 67353; Mature: 67222
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00505 PEPCK_GTP
Important sites: ACT_SITE 274-274 BINDING 82-82 BINDING 223-223 BINDING 230-230 BINDING 272-272 BINDING 389-389 BINDING 420-420
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVSIKGLEGEAPTKNEVLLNWIAENVELFQPDRVVFADGSQEEWDRLTTQLVESGTLI CCCEEEECCCCCCCCCHHHHHHHHHCCCEEECCCEEEEECCCHHHHHHHHHHHHHCCCEE RLNEEKRPNSFLARSNPADVARVESRTFICTPTPEGAGPTNHWADPAEMKAELTERFRGS EECCCCCCCCCCCCCCCCHHHEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC MKGRTMYVVPFCMGPINDPAPKLGVQLTDSEYVVLSMRIMTRMGAEALAKIGDTGSFVPC CCCCEEEEEEEECCCCCCCCCCCCEEECCCCEEEEHHHHHHHHCHHHHHHHCCCCCHHHH LHSVGAPLEPGQEDVAWPCNEEKYITHFPETKEIWSYGSGYGGNAILAKKCYALRIASVM HHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AKEEGWMAEHMLILKLTSPEKKVYYIAAAFPSACGKTNLAMLQPTIDGWSAEVVGDDIAW HHCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCEEEECCCCEEE LRFGEDGRLYAINPENGFFGVAPGTNYSSNPNAMRTMEPGNTLFTNVALTDDGDIWWEDL EEECCCCCEEEECCCCCEEECCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCHHHHH ENMPEHLTDWLGNDWTPESSQPSSHPNSRYCVPLAQCPVAAEEYNDPQGVPISAILFGGR HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHCCCCHHHCCCCCCCEEEEEEECCC RPDTVPLVSQAHNWDHATMIGALLSSGQTAAAEGTVGALRHDPMAMLPFIGYNAADYLQH CCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHCCCCHHHHHHH WIDMGKKGGDKMPEVFLVNWFRRGDDGRFLWPGFGDNSRVLKWIVDRIEGRVEADETIAG HHHHCCCCCCCCCCEEEEEHHHCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCC YTARVEDLDLTGLDTPIEDIREALSAPAAQWKSDLADNEEYLTFLGSKGSAVPAEVLEQF EEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHH EALKARVAAAES HHHHHHHHHCCC >Mature Secondary Structure STVSIKGLEGEAPTKNEVLLNWIAENVELFQPDRVVFADGSQEEWDRLTTQLVESGTLI CCEEEECCCCCCCCCHHHHHHHHHCCCEEECCCEEEEECCCHHHHHHHHHHHHHCCCEE RLNEEKRPNSFLARSNPADVARVESRTFICTPTPEGAGPTNHWADPAEMKAELTERFRGS EECCCCCCCCCCCCCCCCHHHEECCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC MKGRTMYVVPFCMGPINDPAPKLGVQLTDSEYVVLSMRIMTRMGAEALAKIGDTGSFVPC CCCCEEEEEEEECCCCCCCCCCCCEEECCCCEEEEHHHHHHHHCHHHHHHHCCCCCHHHH LHSVGAPLEPGQEDVAWPCNEEKYITHFPETKEIWSYGSGYGGNAILAKKCYALRIASVM HHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH AKEEGWMAEHMLILKLTSPEKKVYYIAAAFPSACGKTNLAMLQPTIDGWSAEVVGDDIAW HHCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCEEEECCCCEEE LRFGEDGRLYAINPENGFFGVAPGTNYSSNPNAMRTMEPGNTLFTNVALTDDGDIWWEDL EEECCCCCEEEECCCCCEEECCCCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCHHHHH ENMPEHLTDWLGNDWTPESSQPSSHPNSRYCVPLAQCPVAAEEYNDPQGVPISAILFGGR HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHCCCCHHHCCCCCCCEEEEEEECCC RPDTVPLVSQAHNWDHATMIGALLSSGQTAAAEGTVGALRHDPMAMLPFIGYNAADYLQH CCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHCCCCHHHHHHH WIDMGKKGGDKMPEVFLVNWFRRGDDGRFLWPGFGDNSRVLKWIVDRIEGRVEADETIAG HHHHCCCCCCCCCCEEEEEHHHCCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCC YTARVEDLDLTGLDTPIEDIREALSAPAAQWKSDLADNEEYLTFLGSKGSAVPAEVLEQF EEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHH EALKARVAAAES HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14602910