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The map label for this gene is nagZ [H]

Identifier: 38234715

GI number: 38234715

Start: 2246580

End: 2247743

Strand: Reverse

Name: nagZ [H]

Synonym: DIP2172

Alternate gene names: 38234715

Gene position: 2247743-2246580 (Counterclockwise)

Preceding gene: 38234718

Following gene: 38234714

Centisome position: 90.32

GC content: 58.76

Gene sequence:

>1164_bases
ATGGATAACCTACGCCGCGTTTTCACACCCGCCTCGCTGATTCTTGGCACCGTTGTTGCCGCTAGCATGCTGAGCTCCTG
CTCGCAGGACTCCTCCCAACAGGCTGCGCCAAGCACTCCTTCATCAACTCCTACTGCGTCGCAGTCTGAGCAGTCCTCGT
CGGCAATGTCGGCAACGTCGTCAACGCCGCAGGCTGTTGCTTTAGACCCAGTGCAGCTGCGCAAAGATGCTGCCAGCTTG
ATGATGGTGGGCGTGGGCAATTTCGACGATGCCCTCTTTGCCATCCAGCAAGGTGCCGGCGGAATTTTTATCGGCTCGGG
TACAGATCCCCAGATCTTGACAACCCCAGGCCGCGACATTGCGGAGCTGCGTCGAATAGCGGGGCGACCGCTGTCTGTAG
CCATCGACTTTGAGGGTGGGCGCGTGTTGCGTCACCGCGGGATCCTTGGCGATTTCCCATCCCCGCAGGTGATGGCGCAA
ACCATGACCCCAGAGCAGGTGCGCGGAATGGCTTATGACATGGGTCGTTCCTTGTTCGCACATGGCATTAATGTGAACTT
TGCGCCGGTAGTCGATATTGAAGCCGGCCTTGAAGTAGTAGGCGATCGCGCGTTTAGCCCAGATCCGCTTATCGACGCCA
CCTACGCCACCGCATTCGCCCAAGGCATGGCGGATGCTGGGGTGCGTCCCGTACTCAAGCACTTCCCAGGGCATGGCCGC
GCCAGCGGTGACTCGCACACCGCACAAGTACACACCCCACCATTGGCTGAGCTAGAAAAGCTCGATCTGATCCCTTATGG
CCGAGTGCCGGTTGCTGGTGCGGGCGTGATGGTTGGGCACATGATCGTGCCAGGTTTGGGTGCGCCAGAAACCCCATCGA
CGATCAACCCTGCCGCATATCAGTTGCTTCGTTCCGGTTCGTATCCCGGTGGTCAACCTTTTAGTGGCGTGATTTACACC
GATGATTTGACCATGGGTGCGGTTACATCATTAATGCCCACTGTGCAGGCGGTACCAGCAGCTCTAGCAGCGGGTGCTGA
TCAGGCACTGTGGGTAAGTACAGCGGGCTTGGTCGAAGCCATTGATGCCACTGTGGCTGCAGTCTCGGAGGGGCGTTACC
CCGTCGAACAGTTCAAGGCTTCAGTTGCGCGAGTCGCAGGCTAA

Upstream 100 bases:

>100_bases
TAAAACAGCGCTGGCAATTGCCGGTCCAAGGGTGCGTCGGTTTAATGAATCGGAATCAAAGGCCATGCGCACTACTCTAG
CGTGGTTTACTAGATAGGTA

Downstream 100 bases:

>100_bases
GGCGTGTGTGCACTAAATTGGGTCAGGTGAGTTCTAAGAAAGTAGCCAAGTTTAGTGCGGGTGTGATCCTGGGGCTGGGA
GTCCTCGGCGGTATCGCATA

Product: putative secreted glycosyl hydrolase

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MDNLRRVFTPASLILGTVVAASMLSSCSQDSSQQAAPSTPSSTPTASQSEQSSSAMSATSSTPQAVALDPVQLRKDAASL
MMVGVGNFDDALFAIQQGAGGIFIGSGTDPQILTTPGRDIAELRRIAGRPLSVAIDFEGGRVLRHRGILGDFPSPQVMAQ
TMTPEQVRGMAYDMGRSLFAHGINVNFAPVVDIEAGLEVVGDRAFSPDPLIDATYATAFAQGMADAGVRPVLKHFPGHGR
ASGDSHTAQVHTPPLAELEKLDLIPYGRVPVAGAGVMVGHMIVPGLGAPETPSTINPAAYQLLRSGSYPGGQPFSGVIYT
DDLTMGAVTSLMPTVQAVPAALAAGADQALWVSTAGLVEAIDATVAAVSEGRYPVEQFKASVARVAG

Sequences:

>Translated_387_residues
MDNLRRVFTPASLILGTVVAASMLSSCSQDSSQQAAPSTPSSTPTASQSEQSSSAMSATSSTPQAVALDPVQLRKDAASL
MMVGVGNFDDALFAIQQGAGGIFIGSGTDPQILTTPGRDIAELRRIAGRPLSVAIDFEGGRVLRHRGILGDFPSPQVMAQ
TMTPEQVRGMAYDMGRSLFAHGINVNFAPVVDIEAGLEVVGDRAFSPDPLIDATYATAFAQGMADAGVRPVLKHFPGHGR
ASGDSHTAQVHTPPLAELEKLDLIPYGRVPVAGAGVMVGHMIVPGLGAPETPSTINPAAYQLLRSGSYPGGQPFSGVIYT
DDLTMGAVTSLMPTVQAVPAALAAGADQALWVSTAGLVEAIDATVAAVSEGRYPVEQFKASVARVAG
>Mature_387_residues
MDNLRRVFTPASLILGTVVAASMLSSCSQDSSQQAAPSTPSSTPTASQSEQSSSAMSATSSTPQAVALDPVQLRKDAASL
MMVGVGNFDDALFAIQQGAGGIFIGSGTDPQILTTPGRDIAELRRIAGRPLSVAIDFEGGRVLRHRGILGDFPSPQVMAQ
TMTPEQVRGMAYDMGRSLFAHGINVNFAPVVDIEAGLEVVGDRAFSPDPLIDATYATAFAQGMADAGVRPVLKHFPGHGR
ASGDSHTAQVHTPPLAELEKLDLIPYGRVPVAGAGVMVGHMIVPGLGAPETPSTINPAAYQLLRSGSYPGGQPFSGVIYT
DDLTMGAVTSLMPTVQAVPAALAAGADQALWVSTAGLVEAIDATVAAVSEGRYPVEQFKASVARVAG

Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=273, Percent_Identity=30.03663003663, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022956
- InterPro:   IPR019800
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3 [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 39894; Mature: 39894

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLRRVFTPASLILGTVVAASMLSSCSQDSSQQAAPSTPSSTPTASQSEQSSSAMSATS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
STPQAVALDPVQLRKDAASLMMVGVGNFDDALFAIQQGAGGIFIGSGTDPQILTTPGRDI
CCCCEEECCHHHHHHHHHHEEEEECCCCCHHHHHHCCCCCEEEEECCCCCCEEECCCCCH
AELRRIAGRPLSVAIDFEGGRVLRHRGILGDFPSPQVMAQTMTPEQVRGMAYDMGRSLFA
HHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHH
HGINVNFAPVVDIEAGLEVVGDRAFSPDPLIDATYATAFAQGMADAGVRPVLKHFPGHGR
HCCCCCCEEEEEHHHCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
ASGDSHTAQVHTPPLAELEKLDLIPYGRVPVAGAGVMVGHMIVPGLGAPETPSTINPAAY
CCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHH
QLLRSGSYPGGQPFSGVIYTDDLTMGAVTSLMPTVQAVPAALAAGADQALWVSTAGLVEA
HHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH
IDATVAAVSEGRYPVEQFKASVARVAG
HHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDNLRRVFTPASLILGTVVAASMLSSCSQDSSQQAAPSTPSSTPTASQSEQSSSAMSATS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
STPQAVALDPVQLRKDAASLMMVGVGNFDDALFAIQQGAGGIFIGSGTDPQILTTPGRDI
CCCCEEECCHHHHHHHHHHEEEEECCCCCHHHHHHCCCCCEEEEECCCCCCEEECCCCCH
AELRRIAGRPLSVAIDFEGGRVLRHRGILGDFPSPQVMAQTMTPEQVRGMAYDMGRSLFA
HHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHH
HGINVNFAPVVDIEAGLEVVGDRAFSPDPLIDATYATAFAQGMADAGVRPVLKHFPGHGR
HCCCCCCEEEEEHHHCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
ASGDSHTAQVHTPPLAELEKLDLIPYGRVPVAGAGVMVGHMIVPGLGAPETPSTINPAAY
CCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHH
QLLRSGSYPGGQPFSGVIYTDDLTMGAVTSLMPTVQAVPAALAAGADQALWVSTAGLVEA
HHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH
IDATVAAVSEGRYPVEQFKASVARVAG
HHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA