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The map label for this gene is 38234698

Identifier: 38234698

GI number: 38234698

Start: 2214506

End: 2214883

Strand: Reverse

Name: 38234698

Synonym: DIP2153

Alternate gene names: NA

Gene position: 2214883-2214506 (Counterclockwise)

Preceding gene: 38234699

Following gene: 38234697

Centisome position: 89.0

GC content: 65.34

Gene sequence:

>378_bases
ATGCCGGTCAAACCAGCGTCCCCGCGCTCCCACCCCGGCTGCCCCGAGCTCACCCACGAACGCTACTGCGACGCCCAGGC
CAAGGCAGAGGACGCCCGGTATCGGAAGTATCAGCGTGATCCGAAGATCAACCGCCGCTACGGTTCACGGTGGCGCAAGA
TCCGCGCCGCCTACGTCGCCGCCCACCCGCTCTGCGAAGACTGCCTCGAAGCCGGTCGCTACACACCCGTGCAGGAAGTT
CACCACGTCCTCCCTATCGAACACGGCGGCACCCACAACTTCGACAACCTGCAAAGCCTGTGCAAGCCCTGCCACTCGCG
CCAGAGCGCGCTCGACGATGACCGCTGGAGGCAACAACCTCGGGTCTACACCTACTGA

Upstream 100 bases:

>100_bases
GCTGAGCAGGGATACACCCAGTCCAAGACCCACGAATACGGCGAAGGTCAGACCCGCACCCGGAACTTGGGGCTTCACTA
TGTCCGGGAAGGAGCCAGCG

Downstream 100 bases:

>100_bases
CGAGCCCACACGTTGGCCGCTGTCGCGTCGATCATCTGGAATCTTAAAGGGCGGATTCTAAGGATCGTGGAAACACCTGA
CCTTAATTGGTGGTGTTTGT

Product: putative bacteriophage holin protein

Products: NA

Alternate protein names: HNH Endonuclease Domain-Containing Protein; Phage Associated Protein; Restriction Endonuclease; Bacteriophage Holin Protein; Holin Protein; Bacteriophage Endonuclease; Phage-Like Protein; HNH Endonuclease Domain Protein

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MPVKPASPRSHPGCPELTHERYCDAQAKAEDARYRKYQRDPKINRRYGSRWRKIRAAYVAAHPLCEDCLEAGRYTPVQEV
HHVLPIEHGGTHNFDNLQSLCKPCHSRQSALDDDRWRQQPRVYTY

Sequences:

>Translated_125_residues
MPVKPASPRSHPGCPELTHERYCDAQAKAEDARYRKYQRDPKINRRYGSRWRKIRAAYVAAHPLCEDCLEAGRYTPVQEV
HHVLPIEHGGTHNFDNLQSLCKPCHSRQSALDDDRWRQQPRVYTY
>Mature_124_residues
PVKPASPRSHPGCPELTHERYCDAQAKAEDARYRKYQRDPKINRRYGSRWRKIRAAYVAAHPLCEDCLEAGRYTPVQEVH
HVLPIEHGGTHNFDNLQSLCKPCHSRQSALDDDRWRQQPRVYTY

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14655; Mature: 14523

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVKPASPRSHPGCPELTHERYCDAQAKAEDARYRKYQRDPKINRRYGSRWRKIRAAYVA
CCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AHPLCEDCLEAGRYTPVQEVHHVLPIEHGGTHNFDNLQSLCKPCHSRQSALDDDRWRQQP
HHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCC
RVYTY
CCCCC
>Mature Secondary Structure 
PVKPASPRSHPGCPELTHERYCDAQAKAEDARYRKYQRDPKINRRYGSRWRKIRAAYVA
CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AHPLCEDCLEAGRYTPVQEVHHVLPIEHGGTHNFDNLQSLCKPCHSRQSALDDDRWRQQP
HHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCC
RVYTY
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA