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The map label for this gene is yizB [H]

Identifier: 38234696

GI number: 38234696

Start: 2212180

End: 2212506

Strand: Reverse

Name: yizB [H]

Synonym: DIP2147

Alternate gene names: 38234696

Gene position: 2212506-2212180 (Counterclockwise)

Preceding gene: 38234697

Following gene: 38234695

Centisome position: 88.9

GC content: 53.21

Gene sequence:

>327_bases
GTGTCTGAGTCGCAGTTACGCAAGGGCGCTGTTGAACTGATTGTCCTTGGATTGCTTTCGTCTCGTCCTTCTTACGGGGG
GCAGCTTGTAGAGCGTTTTCGTGAGGAAGCGGGGTTGGAGATTTCGACGGGTACGTTATATCCGCTGCTTGCGCGTCTAC
GTAAATCAGGGTTGGTAGTTACGGCTTGGGAGGAGTCTCCGGTAGGGCCACCGAGGAAGATTTATAAGCTCGCAAAACCT
GGGAAGAATCGCTTATTGCAGATGCGCCGCGAGTGGGAGGCGCTTGATTGTGCTGTGAAGCGAACAACGCAGAAAGGAAT
ACGGTAA

Upstream 100 bases:

>100_bases
AGTCACTAGACATCACAGTCCTAGCGAAAAAGTAGTTGCTAGGCTTTTGGACAGGCAGTAGTATGTTATACAAGGAACAT
GGTTAAGCAAGGATAGGGTT

Downstream 100 bases:

>100_bases
TGAAGTGGTTCGGTAAGGACGCAGAAGGGCAGACGCGAGTTTTGGGGATACCTGTCTCCGGGGTGTGGTTGGGGCGCTCT
GATGCTGCGCTGGATGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSESQLRKGAVELIVLGLLSSRPSYGGQLVERFREEAGLEISTGTLYPLLARLRKSGLVVTAWEESPVGPPRKIYKLAKP
GKNRLLQMRREWEALDCAVKRTTQKGIR

Sequences:

>Translated_108_residues
MSESQLRKGAVELIVLGLLSSRPSYGGQLVERFREEAGLEISTGTLYPLLARLRKSGLVVTAWEESPVGPPRKIYKLAKP
GKNRLLQMRREWEALDCAVKRTTQKGIR
>Mature_107_residues
SESQLRKGAVELIVLGLLSSRPSYGGQLVERFREEAGLEISTGTLYPLLARLRKSGLVVTAWEESPVGPPRKIYKLAKPG
KNRLLQMRREWEALDCAVKRTTQKGIR

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12135; Mature: 12004

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESQLRKGAVELIVLGLLSSRPSYGGQLVERFREEAGLEISTGTLYPLLARLRKSGLVV
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEE
TAWEESPVGPPRKIYKLAKPGKNRLLQMRREWEALDCAVKRTTQKGIR
EECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SESQLRKGAVELIVLGLLSSRPSYGGQLVERFREEAGLEISTGTLYPLLARLRKSGLVV
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEE
TAWEESPVGPPRKIYKLAKPGKNRLLQMRREWEALDCAVKRTTQKGIR
EECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]