| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234686
Identifier: 38234686
GI number: 38234686
Start: 2201757
End: 2202914
Strand: Direct
Name: 38234686
Synonym: DIP2137
Alternate gene names: NA
Gene position: 2201757-2202914 (Clockwise)
Preceding gene: 38234685
Following gene: 38234687
Centisome position: 88.47
GC content: 56.65
Gene sequence:
>1158_bases TTGACCGTTTTCATCGGTGTGTGGATTGTGGCTACCCTCGTGGGTCTTGTCAGGCTCTGGCCGGGTGATAAAGAACCACA GATCAGCCCCGAGTTTTATCAGACTTTTAGCTTGGGGCAAACTCAGGTGGAGGGCCAGATTGTGGCGCAATCAAAAGGCA GCTGCTCCGCAATGGAGTCCGGCACGGTATTTGATACTTCTCCTCGGGTAGCCCCTGGTGCGGATCAGCAGTGCGATTGG TTCATCGTTCGAATCGATGAGGGCGACGATGCTGGTAAGCGCACGTTGATTGTGAATTCGGGTCAGCCTGGTGAGCCAGT ATTGGAAAAGGATCAGCGGATTCGGTTGTTGCAGGCTCCTACCGCTGATGGGGCTGTGCATTATTCTTTTGGTGATTATC ACCGCACGTCGTCGCTGCTGATCTGGGGCGCGCTGATTGCGGCGTCGATAGTTGCGTTGGCGGCGACGCGTGGTTTGCGT TCGTTGGTGGGCTTGGCGTTTACCATGGCGGTTGTTGCGATGTTTACGCTGCCGGCGTTGTTGGTGGGGGCGTCTCCGAC AGGGGTGGCGATTGTCAGCGGCGCACTGATTCTGATCCCCGTGTTATTTGTGGTCCATGGCCTGAATTGGAAGTCTGCCG CGGCGCTGGGCGGAACGTTGCTGGCGTTGCTGATTGCTGCGGGCTTATCTTATTGGGCGATTGAGCATAATCAGCTGCGT GGCTTGGGCAATGAGGACAACCTACAGATTATTTTGTATCTGCCTGGGGTGTCGGTAACTGGCCTCATGCTGTGTGGGTT CATTATCGGCGCACTAGGTGTGCTCAACGATGTGACGATTGCGCAGGCGTCGACAGTCAATGAGCTGGCAGAGCAAAACC CGACGGCAACACGTTGGCAGTGGTTTACCTCGGCAATGAAGGTGGGCCGTGACCATATTGCGTCGATGGTGTACACGCTG GTGTTGTCCTACACCGGCGCCACGCTGCCGCTGTTGTTGCTGCTGTCGGTGGCGCATCGTCCGCTGGCGCAAACTCTCAC TAGCGATGTGATGGCTACTGAGCTGTTGCGCTCTGGTTTGGGCGCGATGGCGCTTACTCTTGCAGTGCCGCTGACCACAA TTGTGGCTGCGTGGACTGTGCGCACCTCGCCAAAATAA
Upstream 100 bases:
>100_bases GTCGCAGCGTCTGCCACGTGCACCGCGCGTATCGACGCCTCCTCGCTCCTCGGGTTCTACAAGCAGGGGCATTCCGGCGC TAGGTCCGTGGCGCTGGGCG
Downstream 100 bases:
>100_bases CGGGTGAGCTTATAACATCGTTCCCATGCATAAACGTTGGGAATCTCGCCTCTTATTATGGACGGCACAGGTATCCACCA TCTGGATGGTGGTGGGCCTT
Product: putative integral membrane protein
Products: NA
Alternate protein names: YibE/F-Like Protein; Multitransmembrane Protein; Integral Membrane Protein; YibE/F-Like Family Protein
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTVFIGVWIVATLVGLVRLWPGDKEPQISPEFYQTFSLGQTQVEGQIVAQSKGSCSAMESGTVFDTSPRVAPGADQQCDW FIVRIDEGDDAGKRTLIVNSGQPGEPVLEKDQRIRLLQAPTADGAVHYSFGDYHRTSSLLIWGALIAASIVALAATRGLR SLVGLAFTMAVVAMFTLPALLVGASPTGVAIVSGALILIPVLFVVHGLNWKSAAALGGTLLALLIAAGLSYWAIEHNQLR GLGNEDNLQIILYLPGVSVTGLMLCGFIIGALGVLNDVTIAQASTVNELAEQNPTATRWQWFTSAMKVGRDHIASMVYTL VLSYTGATLPLLLLLSVAHRPLAQTLTSDVMATELLRSGLGAMALTLAVPLTTIVAAWTVRTSPK
Sequences:
>Translated_385_residues MTVFIGVWIVATLVGLVRLWPGDKEPQISPEFYQTFSLGQTQVEGQIVAQSKGSCSAMESGTVFDTSPRVAPGADQQCDW FIVRIDEGDDAGKRTLIVNSGQPGEPVLEKDQRIRLLQAPTADGAVHYSFGDYHRTSSLLIWGALIAASIVALAATRGLR SLVGLAFTMAVVAMFTLPALLVGASPTGVAIVSGALILIPVLFVVHGLNWKSAAALGGTLLALLIAAGLSYWAIEHNQLR GLGNEDNLQIILYLPGVSVTGLMLCGFIIGALGVLNDVTIAQASTVNELAEQNPTATRWQWFTSAMKVGRDHIASMVYTL VLSYTGATLPLLLLLSVAHRPLAQTLTSDVMATELLRSGLGAMALTLAVPLTTIVAAWTVRTSPK >Mature_384_residues TVFIGVWIVATLVGLVRLWPGDKEPQISPEFYQTFSLGQTQVEGQIVAQSKGSCSAMESGTVFDTSPRVAPGADQQCDWF IVRIDEGDDAGKRTLIVNSGQPGEPVLEKDQRIRLLQAPTADGAVHYSFGDYHRTSSLLIWGALIAASIVALAATRGLRS LVGLAFTMAVVAMFTLPALLVGASPTGVAIVSGALILIPVLFVVHGLNWKSAAALGGTLLALLIAAGLSYWAIEHNQLRG LGNEDNLQIILYLPGVSVTGLMLCGFIIGALGVLNDVTIAQASTVNELAEQNPTATRWQWFTSAMKVGRDHIASMVYTLV LSYTGATLPLLLLLSVAHRPLAQTLTSDVMATELLRSGLGAMALTLAVPLTTIVAAWTVRTSPK
Specific function: Unknown
COG id: COG5438
COG function: function code S; Predicted multitransmembrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40787; Mature: 40656
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFIGVWIVATLVGLVRLWPGDKEPQISPEFYQTFSLGQTQVEGQIVAQSKGSCSAMES CEEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEECCEEEECCCCCCCCCCC GTVFDTSPRVAPGADQQCDWFIVRIDEGDDAGKRTLIVNSGQPGEPVLEKDQRIRLLQAP CCEECCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHHCCCCCEEEEECC TADGAVHYSFGDYHRTSSLLIWGALIAASIVALAATRGLRSLVGLAFTMAVVAMFTLPAL CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGASPTGVAIVSGALILIPVLFVVHGLNWKSAAALGGTLLALLIAAGLSYWAIEHNQLR HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHEEEEHHHHC GLGNEDNLQIILYLPGVSVTGLMLCGFIIGALGVLNDVTIAQASTVNELAEQNPTATRWQ CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHH WFTSAMKVGRDHIASMVYTLVLSYTGATLPLLLLLSVAHRPLAQTLTSDVMATELLRSGL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCH GAMALTLAVPLTTIVAAWTVRTSPK HHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TVFIGVWIVATLVGLVRLWPGDKEPQISPEFYQTFSLGQTQVEGQIVAQSKGSCSAMES EEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEECCEEEECCCCCCCCCCC GTVFDTSPRVAPGADQQCDWFIVRIDEGDDAGKRTLIVNSGQPGEPVLEKDQRIRLLQAP CCEECCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHHCCCCCEEEEECC TADGAVHYSFGDYHRTSSLLIWGALIAASIVALAATRGLRSLVGLAFTMAVVAMFTLPAL CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGASPTGVAIVSGALILIPVLFVVHGLNWKSAAALGGTLLALLIAAGLSYWAIEHNQLR HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHEEEEHHHHC GLGNEDNLQIILYLPGVSVTGLMLCGFIIGALGVLNDVTIAQASTVNELAEQNPTATRWQ CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHH WFTSAMKVGRDHIASMVYTLVLSYTGATLPLLLLLSVAHRPLAQTLTSDVMATELLRSGL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCH GAMALTLAVPLTTIVAAWTVRTSPK HHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA