| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is dnaJ1
Identifier: 38234667
GI number: 38234667
Start: 2168853
End: 2170025
Strand: Reverse
Name: dnaJ1
Synonym: DIP2118
Alternate gene names: 38234667
Gene position: 2170025-2168853 (Counterclockwise)
Preceding gene: 38234668
Following gene: 38234666
Centisome position: 87.2
GC content: 60.19
Gene sequence:
>1173_bases ATGGCAGCGAAAAACGAGTGGGCTGAGAAAGACTACTATGCCGACCTAGGAGTCTCCTCGTCCGCAACTGAAGCGGAAAT TAAAAAGGCGTATCGCAAGCTGGCGCGAGAAAACCACCCCGATTCTCACCCAGGGGATGCCGCAGCCGAAGAGCGTTTTA AAAAGGTCGCTGAGGCCTATGACGTCGTGGGTGATGAGACGAAGCGGAAAGAGTATGACGAGTTCCGCTCTATGATCGCT TCTGGCGGGTTCGGAGGCGCCGGATTCCCCGGCGGGTTTCGGACGCAAGAAGGCTTCGACTTCGACCTCGGAGACATCTT TGGATCTGGAGCGGGTCGAGGCCACGCTCCGCAAGGTGGTTTTGGGGATATCTTCGGTGGCATTTTCAACCGCGGCGGTG GTGCTCGCAACGCAGCTCGGCCGACGCGGGGGTCCGACGTCGAAACGGAAATAACCCTCGAATTTCGTGAAGCGGCCAAG GGCACCACGATTCCCTTGCAGCTGACTGGCGACGCCCCCTGCCACACCTGCCACGGCTCCGGTTCGCGTTCCGGCGCACC CACCACGTGCACCGAGTGCAATGGAACGGGCTTTACCTCGGAAAACAAGGGTGCCTTTGGATTCTCTGCACCGTGTACGC AGTGCGGCGGCACCGGCAAGATGATCTCTGATCCGTGCCCTGATTGCTCGGGTACTGGAACGCAGCGTCGTACTCGCTCG ATTACTGTGCGCATCCCTGCTGGTGTGGTCGATGGCCAAAAGGTGCGTCTGGCTGGCCAAGGTGAGGCCGGTCCTAATGG GCTGCCGGCTGGTGATCTGTATGTCACGGTGCATGTGAAAAACGACCGAGTGTTTACCCGTTCGGGCGATGACCTCGAGG TGACGGTGCCGGTGTCCTATGCGGAGTTGGCGTTGGGCGATACTATTTCGGTGCCTACGCTCGACCTTCCGGTCCGAGTT CGTATTCCTTCCGGCACGCCTAATGGTCGTGTGCTGAGGGTGCGCGGTAAGGGCGTGCCTAAGCGTGGCGGTTCTGCGGG AGATCTGCTGGTCAAGGTAGAAGTGACGGTGCCGTCGAGTTTGGATGCGGCGTCGGCAAGCGCGCTGCGCGCCTATGTTC AAGCCGAGCGGGACGCGGGTTTTGATCCGCGTGCTGGCTGGGCAGGAAAATAA
Upstream 100 bases:
>100_bases TTCACTGAGATGAATGCGGGATCCAGCAGCCCACGGTGGTGGGGAGCTGGGTTCCGCATTTTCAACTAAATACGGAAAAC AAGAAAGGAGGAGAAGACCT
Downstream 100 bases:
>100_bases CGCGAGAAGGAGGTGAGCTTTATGGCCCAAGAGTTTTCTGGCGACGTTTTTGTTATCTCCGTTGCTGCGGAGCTTGCGGG AATGCACGCTCAAACCTTGC
Product: chaperone protein DnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MAAKNEWAEKDYYADLGVSSSATEAEIKKAYRKLARENHPDSHPGDAAAEERFKKVAEAYDVVGDETKRKEYDEFRSMIA SGGFGGAGFPGGFRTQEGFDFDLGDIFGSGAGRGHAPQGGFGDIFGGIFNRGGGARNAARPTRGSDVETEITLEFREAAK GTTIPLQLTGDAPCHTCHGSGSRSGAPTTCTECNGTGFTSENKGAFGFSAPCTQCGGTGKMISDPCPDCSGTGTQRRTRS ITVRIPAGVVDGQKVRLAGQGEAGPNGLPAGDLYVTVHVKNDRVFTRSGDDLEVTVPVSYAELALGDTISVPTLDLPVRV RIPSGTPNGRVLRVRGKGVPKRGGSAGDLLVKVEVTVPSSLDAASASALRAYVQAERDAGFDPRAGWAGK
Sequences:
>Translated_390_residues MAAKNEWAEKDYYADLGVSSSATEAEIKKAYRKLARENHPDSHPGDAAAEERFKKVAEAYDVVGDETKRKEYDEFRSMIA SGGFGGAGFPGGFRTQEGFDFDLGDIFGSGAGRGHAPQGGFGDIFGGIFNRGGGARNAARPTRGSDVETEITLEFREAAK GTTIPLQLTGDAPCHTCHGSGSRSGAPTTCTECNGTGFTSENKGAFGFSAPCTQCGGTGKMISDPCPDCSGTGTQRRTRS ITVRIPAGVVDGQKVRLAGQGEAGPNGLPAGDLYVTVHVKNDRVFTRSGDDLEVTVPVSYAELALGDTISVPTLDLPVRV RIPSGTPNGRVLRVRGKGVPKRGGSAGDLLVKVEVTVPSSLDAASASALRAYVQAERDAGFDPRAGWAGK >Mature_389_residues AAKNEWAEKDYYADLGVSSSATEAEIKKAYRKLARENHPDSHPGDAAAEERFKKVAEAYDVVGDETKRKEYDEFRSMIAS GGFGGAGFPGGFRTQEGFDFDLGDIFGSGAGRGHAPQGGFGDIFGGIFNRGGGARNAARPTRGSDVETEITLEFREAAKG TTIPLQLTGDAPCHTCHGSGSRSGAPTTCTECNGTGFTSENKGAFGFSAPCTQCGGTGKMISDPCPDCSGTGTQRRTRSI TVRIPAGVVDGQKVRLAGQGEAGPNGLPAGDLYVTVHVKNDRVFTRSGDDLEVTVPVSYAELALGDTISVPTLDLPVRVR IPSGTPNGRVLRVRGKGVPKRGGSAGDLLVKVEVTVPSSLDAASASALRAYVQAERDAGFDPRAGWAGK
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain
Homologues:
Organism=Homo sapiens, GI205360838, Length=382, Percent_Identity=32.1989528795811, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI205360840, Length=382, Percent_Identity=32.1989528795811, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI4504511, Length=366, Percent_Identity=30.327868852459, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI194328760, Length=364, Percent_Identity=29.3956043956044, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI194328758, Length=364, Percent_Identity=29.3956043956044, Blast_Score=145, Evalue=5e-35, Organism=Homo sapiens, GI5031741, Length=365, Percent_Identity=29.041095890411, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI194328762, Length=328, Percent_Identity=26.5243902439024, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI7706495, Length=363, Percent_Identity=28.9256198347107, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI6631085, Length=379, Percent_Identity=29.023746701847, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI39204547, Length=364, Percent_Identity=24.1758241758242, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI201862587, Length=66, Percent_Identity=56.0606060606061, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI201862518, Length=66, Percent_Identity=56.0606060606061, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI56549115, Length=66, Percent_Identity=56.0606060606061, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI9558755, Length=101, Percent_Identity=40.5940594059406, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=53.030303030303, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=53.030303030303, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI194306642, Length=125, Percent_Identity=38.4, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI194306640, Length=125, Percent_Identity=38.4, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI56687498, Length=65, Percent_Identity=49.2307692307692, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI27151736, Length=110, Percent_Identity=41.8181818181818, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI68077168, Length=120, Percent_Identity=36.6666666666667, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI68077166, Length=120, Percent_Identity=36.6666666666667, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI88501736, Length=110, Percent_Identity=41.8181818181818, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI47777312, Length=99, Percent_Identity=46.4646464646465, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI5453690, Length=66, Percent_Identity=48.4848484848485, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI23503241, Length=64, Percent_Identity=53.125, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI24308127, Length=67, Percent_Identity=43.2835820895522, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI29126218, Length=66, Percent_Identity=45.4545454545455, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1786197, Length=368, Percent_Identity=41.8478260869565, Blast_Score=275, Evalue=5e-75, Organism=Escherichia coli, GI1787235, Length=380, Percent_Identity=32.6315789473684, Blast_Score=174, Evalue=8e-45, Organism=Caenorhabditis elegans, GI17553096, Length=375, Percent_Identity=31.2, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17553098, Length=375, Percent_Identity=31.2, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17507263, Length=385, Percent_Identity=29.0909090909091, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17554644, Length=126, Percent_Identity=39.6825396825397, Blast_Score=85, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17534355, Length=66, Percent_Identity=57.5757575757576, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17563890, Length=234, Percent_Identity=29.9145299145299, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI212645553, Length=64, Percent_Identity=48.4375, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI86563276, Length=64, Percent_Identity=50, Blast_Score=68, Evalue=7e-12, Organism=Caenorhabditis elegans, GI115532378, Length=77, Percent_Identity=42.8571428571429, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324265, Length=368, Percent_Identity=32.8804347826087, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6323870, Length=365, Percent_Identity=30.6849315068493, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6321094, Length=388, Percent_Identity=34.7938144329897, Blast_Score=143, Evalue=6e-35, Organism=Saccharomyces cerevisiae, GI6323119, Length=423, Percent_Identity=25.531914893617, Blast_Score=104, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6324252, Length=442, Percent_Identity=23.0769230769231, Blast_Score=95, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6322194, Length=80, Percent_Identity=47.5, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320888, Length=67, Percent_Identity=50.7462686567164, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322388, Length=120, Percent_Identity=36.6666666666667, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324321, Length=67, Percent_Identity=46.2686567164179, Blast_Score=63, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552813, Length=384, Percent_Identity=32.03125, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI45549272, Length=384, Percent_Identity=32.03125, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI45552811, Length=384, Percent_Identity=32.03125, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24646562, Length=374, Percent_Identity=31.0160427807487, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI24646560, Length=374, Percent_Identity=31.0160427807487, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI24646558, Length=374, Percent_Identity=31.0160427807487, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI24646556, Length=374, Percent_Identity=31.0160427807487, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI21357547, Length=374, Percent_Identity=31.0160427807487, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI28574949, Length=382, Percent_Identity=26.7015706806283, Blast_Score=118, Evalue=9e-27, Organism=Drosophila melanogaster, GI85726398, Length=374, Percent_Identity=29.6791443850267, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI20129487, Length=371, Percent_Identity=28.0323450134771, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI24584014, Length=371, Percent_Identity=28.0323450134771, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI19920464, Length=381, Percent_Identity=26.246719160105, Blast_Score=95, Evalue=9e-20, Organism=Drosophila melanogaster, GI24654066, Length=122, Percent_Identity=41.8032786885246, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24654070, Length=122, Percent_Identity=41.8032786885246, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24654068, Length=122, Percent_Identity=41.8032786885246, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24654072, Length=122, Percent_Identity=41.8032786885246, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24658562, Length=66, Percent_Identity=51.5151515151515, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24658555, Length=66, Percent_Identity=51.5151515151515, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=53.125, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DNAJ2_CORDI (Q6NEZ1)
Other databases:
- EMBL: BX248360 - RefSeq: NP_940434.1 - ProteinModelPortal: Q6NEZ1 - GeneID: 2649585 - GenomeReviews: BX248353_GR - KEGG: cdi:DIP2118 - NMPDR: fig|257309.1.peg.2025 - HOGENOM: HBG635315 - OMA: TGFTSEN - PhylomeDB: Q6NEZ1 - ProtClustDB: PRK14279 - BioCyc: CDIP257309:DIP2118-MONOMER - GO: GO:0005737 - HAMAP: MF_01152 - InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 - Gene3D: G3DSA:1.10.287.110 - Gene3D: G3DSA:2.10.230.10 - PANTHER: PTHR11821 - PRINTS: PR00625 - SMART: SM00271 - TIGRFAMs: TIGR02349
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG; SSF46565 DnaJ_N; SSF49493 HSP40_DnaJ_pep; SSF57938 HSP_DnaJ_cys-rich
EC number: NA
Molecular weight: Translated: 40713; Mature: 40582
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00636 DNAJ_1; PS50076 DNAJ_2; PS51188 ZF_CR; PS00637 DNAJ_CXXCXGXG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKNEWAEKDYYADLGVSSSATEAEIKKAYRKLARENHPDSHPGDAAAEERFKKVAEAY CCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH DVVGDETKRKEYDEFRSMIASGGFGGAGFPGGFRTQEGFDFDLGDIFGSGAGRGHAPQGG HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC FGDIFGGIFNRGGGARNAARPTRGSDVETEITLEFREAAKGTTIPLQLTGDAPCHTCHGS CHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCEEEEEECCCCCCEECCCC GSRSGAPTTCTECNGTGFTSENKGAFGFSAPCTQCGGTGKMISDPCPDCSGTGTQRRTRS CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEE ITVRIPAGVVDGQKVRLAGQGEAGPNGLPAGDLYVTVHVKNDRVFTRSGDDLEVTVPVSY EEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEECCCCCEEEEEECCH AELALGDTISVPTLDLPVRVRIPSGTPNGRVLRVRGKGVPKRGGSAGDLLVKVEVTVPSS HHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCC LDAASASALRAYVQAERDAGFDPRAGWAGK CCHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AAKNEWAEKDYYADLGVSSSATEAEIKKAYRKLARENHPDSHPGDAAAEERFKKVAEAY CCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH DVVGDETKRKEYDEFRSMIASGGFGGAGFPGGFRTQEGFDFDLGDIFGSGAGRGHAPQGG HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC FGDIFGGIFNRGGGARNAARPTRGSDVETEITLEFREAAKGTTIPLQLTGDAPCHTCHGS CHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCEEEEEECCCCCCEECCCC GSRSGAPTTCTECNGTGFTSENKGAFGFSAPCTQCGGTGKMISDPCPDCSGTGTQRRTRS CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEE ITVRIPAGVVDGQKVRLAGQGEAGPNGLPAGDLYVTVHVKNDRVFTRSGDDLEVTVPVSY EEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEECCCCCEEEEEECCH AELALGDTISVPTLDLPVRVRIPSGTPNGRVLRVRGKGVPKRGGSAGDLLVKVEVTVPSS HHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCC LDAASASALRAYVQAERDAGFDPRAGWAGK CCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14602910