Definition Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession NC_002935
Length 2,488,635

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The map label for this gene is 38234660

Identifier: 38234660

GI number: 38234660

Start: 2161498

End: 2162268

Strand: Reverse

Name: 38234660

Synonym: DIP2111

Alternate gene names: NA

Gene position: 2162268-2161498 (Counterclockwise)

Preceding gene: 38234661

Following gene: 38234658

Centisome position: 86.89

GC content: 57.46

Gene sequence:

>771_bases
ATGGCCAATTTGGCTACGGTAGAACGCTATGTCAGTGCTGCCGCTCAACGCGGGGCAGACATGGTGGTGTTTCCAGAGGC
CACGATGCAAGGCTTTGGCACCGGGCGCTTGGATCGCGTCGCCGAGCGTATCGACGGCCCCTTTGCTACCCGAATATGCC
AGCTGGCTCGCGAACTCAACATCGTGATCGTAGTTGGTATGTTTAGCCCCGCAGACACACATGATGGCAAGCAGCGTATT
AATAACGTGGCTTTAATTGCCCACCCCGATTCTGTGCGAGAATACCGCAAGATTCATACCTACGATGCCTTTGGTTTCAA
AGAATCTGACACGGTTCGCCCAGGAAACCAACTGGTTACTTTCCCTGTAGGTGATGTGACCTGCGGAATTGCCGTGTGCT
ATGACGTGCGTTTCCCTCAGCAGTTTATTGACCTTGCACGCTTGGGCGCTGAGGTGATTGTGCTTCCAGCGTCGTGGGCT
GATGGCGAGGGCAAGCTGGAGCAGTGGCGTACGCTTACCGCGGCGCGTGCATTGGACTCCACCAGCTATATCGTCGCCTG
CGACCAAGCGGTGGCAGAGGATGAGCGCGCGCCGGGTGCGCCCACCGGTGTGGGGCATTCCGCGGTGGTAACCCCTGATG
GTCGCCGTATTGCCGAGGCCGGTACGGGGGAGGAGTTGTTCATGGTGAACGTCAACCGTGACCTCGTTAGGCGTACCCGC
GAGGCTATCCCTGTGTTAGCAGATGCGGGTTATAACCAAAACGGTGAGTAA

Upstream 100 bases:

>100_bases
TGCGAAATCCCAGCAAGGCTGTGGATAACTGTGCGCTTAGCGCATAGTCTGGGGTGGCATGTGGATAGCTCTCGCCCAGA
TTTCTAGTAGTGCCGATATA

Downstream 100 bases:

>100_bases
TCGAAGGTTTGCGTGTGGATGATGGTGGGTGGCGTTCCGCGGCGAATAAGTGCCTTGCGGGAGGCTGCCACGTCGTGGGA
GGGACCGGCGATCAAGATGC

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MANLATVERYVSAAAQRGADMVVFPEATMQGFGTGRLDRVAERIDGPFATRICQLARELNIVIVVGMFSPADTHDGKQRI
NNVALIAHPDSVREYRKIHTYDAFGFKESDTVRPGNQLVTFPVGDVTCGIAVCYDVRFPQQFIDLARLGAEVIVLPASWA
DGEGKLEQWRTLTAARALDSTSYIVACDQAVAEDERAPGAPTGVGHSAVVTPDGRRIAEAGTGEELFMVNVNRDLVRRTR
EAIPVLADAGYNQNGE

Sequences:

>Translated_256_residues
MANLATVERYVSAAAQRGADMVVFPEATMQGFGTGRLDRVAERIDGPFATRICQLARELNIVIVVGMFSPADTHDGKQRI
NNVALIAHPDSVREYRKIHTYDAFGFKESDTVRPGNQLVTFPVGDVTCGIAVCYDVRFPQQFIDLARLGAEVIVLPASWA
DGEGKLEQWRTLTAARALDSTSYIVACDQAVAEDERAPGAPTGVGHSAVVTPDGRRIAEAGTGEELFMVNVNRDLVRRTR
EAIPVLADAGYNQNGE
>Mature_255_residues
ANLATVERYVSAAAQRGADMVVFPEATMQGFGTGRLDRVAERIDGPFATRICQLARELNIVIVVGMFSPADTHDGKQRIN
NVALIAHPDSVREYRKIHTYDAFGFKESDTVRPGNQLVTFPVGDVTCGIAVCYDVRFPQQFIDLARLGAEVIVLPASWAD
GEGKLEQWRTLTAARALDSTSYIVACDQAVAEDERAPGAPTGVGHSAVVTPDGRRIAEAGTGEELFMVNVNRDLVRRTRE
AIPVLADAGYNQNGE

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI9910460, Length=251, Percent_Identity=28.2868525896414, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI297632350, Length=256, Percent_Identity=29.6875, Blast_Score=101, Evalue=5e-22,
Organism=Homo sapiens, GI5031947, Length=256, Percent_Identity=29.6875, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI297632348, Length=256, Percent_Identity=29.6875, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17556280, Length=256, Percent_Identity=27.34375, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6323383, Length=258, Percent_Identity=29.0697674418605, Blast_Score=115, Evalue=8e-27,
Organism=Saccharomyces cerevisiae, GI6322335, Length=279, Percent_Identity=28.673835125448, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI21355835, Length=252, Percent_Identity=29.7619047619048, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17933642, Length=231, Percent_Identity=29.8701298701299, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: NA

Molecular weight: Translated: 27779; Mature: 27647

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLATVERYVSAAAQRGADMVVFPEATMQGFGTGRLDRVAERIDGPFATRICQLARELN
CCCHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCC
IVIVVGMFSPADTHDGKQRINNVALIAHPDSVREYRKIHTYDAFGFKESDTVRPGNQLVT
EEEEEEECCCCCCCCHHHHHCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
FPVGDVTCGIAVCYDVRFPQQFIDLARLGAEVIVLPASWADGEGKLEQWRTLTAARALDS
EECCCHHEEEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCC
TSYIVACDQAVAEDERAPGAPTGVGHSAVVTPDGRRIAEAGTGEELFMVNVNRDLVRRTR
CCEEEEECHHHHHHCCCCCCCCCCCCCEEECCCCCEEECCCCCCEEEEEECCHHHHHHHH
EAIPVLADAGYNQNGE
HHCCEEECCCCCCCCC
>Mature Secondary Structure 
ANLATVERYVSAAAQRGADMVVFPEATMQGFGTGRLDRVAERIDGPFATRICQLARELN
CCHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCC
IVIVVGMFSPADTHDGKQRINNVALIAHPDSVREYRKIHTYDAFGFKESDTVRPGNQLVT
EEEEEEECCCCCCCCHHHHHCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
FPVGDVTCGIAVCYDVRFPQQFIDLARLGAEVIVLPASWADGEGKLEQWRTLTAARALDS
EECCCHHEEEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCC
TSYIVACDQAVAEDERAPGAPTGVGHSAVVTPDGRRIAEAGTGEELFMVNVNRDLVRRTR
CCEEEEECHHHHHHCCCCCCCCCCCCCEEECCCCCEEECCCCCCEEEEEECCHHHHHHHH
EAIPVLADAGYNQNGE
HHCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]