| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234660
Identifier: 38234660
GI number: 38234660
Start: 2161498
End: 2162268
Strand: Reverse
Name: 38234660
Synonym: DIP2111
Alternate gene names: NA
Gene position: 2162268-2161498 (Counterclockwise)
Preceding gene: 38234661
Following gene: 38234658
Centisome position: 86.89
GC content: 57.46
Gene sequence:
>771_bases ATGGCCAATTTGGCTACGGTAGAACGCTATGTCAGTGCTGCCGCTCAACGCGGGGCAGACATGGTGGTGTTTCCAGAGGC CACGATGCAAGGCTTTGGCACCGGGCGCTTGGATCGCGTCGCCGAGCGTATCGACGGCCCCTTTGCTACCCGAATATGCC AGCTGGCTCGCGAACTCAACATCGTGATCGTAGTTGGTATGTTTAGCCCCGCAGACACACATGATGGCAAGCAGCGTATT AATAACGTGGCTTTAATTGCCCACCCCGATTCTGTGCGAGAATACCGCAAGATTCATACCTACGATGCCTTTGGTTTCAA AGAATCTGACACGGTTCGCCCAGGAAACCAACTGGTTACTTTCCCTGTAGGTGATGTGACCTGCGGAATTGCCGTGTGCT ATGACGTGCGTTTCCCTCAGCAGTTTATTGACCTTGCACGCTTGGGCGCTGAGGTGATTGTGCTTCCAGCGTCGTGGGCT GATGGCGAGGGCAAGCTGGAGCAGTGGCGTACGCTTACCGCGGCGCGTGCATTGGACTCCACCAGCTATATCGTCGCCTG CGACCAAGCGGTGGCAGAGGATGAGCGCGCGCCGGGTGCGCCCACCGGTGTGGGGCATTCCGCGGTGGTAACCCCTGATG GTCGCCGTATTGCCGAGGCCGGTACGGGGGAGGAGTTGTTCATGGTGAACGTCAACCGTGACCTCGTTAGGCGTACCCGC GAGGCTATCCCTGTGTTAGCAGATGCGGGTTATAACCAAAACGGTGAGTAA
Upstream 100 bases:
>100_bases TGCGAAATCCCAGCAAGGCTGTGGATAACTGTGCGCTTAGCGCATAGTCTGGGGTGGCATGTGGATAGCTCTCGCCCAGA TTTCTAGTAGTGCCGATATA
Downstream 100 bases:
>100_bases TCGAAGGTTTGCGTGTGGATGATGGTGGGTGGCGTTCCGCGGCGAATAAGTGCCTTGCGGGAGGCTGCCACGTCGTGGGA GGGACCGGCGATCAAGATGC
Product: putative hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MANLATVERYVSAAAQRGADMVVFPEATMQGFGTGRLDRVAERIDGPFATRICQLARELNIVIVVGMFSPADTHDGKQRI NNVALIAHPDSVREYRKIHTYDAFGFKESDTVRPGNQLVTFPVGDVTCGIAVCYDVRFPQQFIDLARLGAEVIVLPASWA DGEGKLEQWRTLTAARALDSTSYIVACDQAVAEDERAPGAPTGVGHSAVVTPDGRRIAEAGTGEELFMVNVNRDLVRRTR EAIPVLADAGYNQNGE
Sequences:
>Translated_256_residues MANLATVERYVSAAAQRGADMVVFPEATMQGFGTGRLDRVAERIDGPFATRICQLARELNIVIVVGMFSPADTHDGKQRI NNVALIAHPDSVREYRKIHTYDAFGFKESDTVRPGNQLVTFPVGDVTCGIAVCYDVRFPQQFIDLARLGAEVIVLPASWA DGEGKLEQWRTLTAARALDSTSYIVACDQAVAEDERAPGAPTGVGHSAVVTPDGRRIAEAGTGEELFMVNVNRDLVRRTR EAIPVLADAGYNQNGE >Mature_255_residues ANLATVERYVSAAAQRGADMVVFPEATMQGFGTGRLDRVAERIDGPFATRICQLARELNIVIVVGMFSPADTHDGKQRIN NVALIAHPDSVREYRKIHTYDAFGFKESDTVRPGNQLVTFPVGDVTCGIAVCYDVRFPQQFIDLARLGAEVIVLPASWAD GEGKLEQWRTLTAARALDSTSYIVACDQAVAEDERAPGAPTGVGHSAVVTPDGRRIAEAGTGEELFMVNVNRDLVRRTRE AIPVLADAGYNQNGE
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI9910460, Length=251, Percent_Identity=28.2868525896414, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI297632350, Length=256, Percent_Identity=29.6875, Blast_Score=101, Evalue=5e-22, Organism=Homo sapiens, GI5031947, Length=256, Percent_Identity=29.6875, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI297632348, Length=256, Percent_Identity=29.6875, Blast_Score=101, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17556280, Length=256, Percent_Identity=27.34375, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6323383, Length=258, Percent_Identity=29.0697674418605, Blast_Score=115, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6322335, Length=279, Percent_Identity=28.673835125448, Blast_Score=107, Evalue=1e-24, Organism=Drosophila melanogaster, GI21355835, Length=252, Percent_Identity=29.7619047619048, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI17933642, Length=231, Percent_Identity=29.8701298701299, Blast_Score=89, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 - InterPro: IPR001110 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: NA
Molecular weight: Translated: 27779; Mature: 27647
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLATVERYVSAAAQRGADMVVFPEATMQGFGTGRLDRVAERIDGPFATRICQLARELN CCCHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCC IVIVVGMFSPADTHDGKQRINNVALIAHPDSVREYRKIHTYDAFGFKESDTVRPGNQLVT EEEEEEECCCCCCCCHHHHHCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE FPVGDVTCGIAVCYDVRFPQQFIDLARLGAEVIVLPASWADGEGKLEQWRTLTAARALDS EECCCHHEEEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCC TSYIVACDQAVAEDERAPGAPTGVGHSAVVTPDGRRIAEAGTGEELFMVNVNRDLVRRTR CCEEEEECHHHHHHCCCCCCCCCCCCCEEECCCCCEEECCCCCCEEEEEECCHHHHHHHH EAIPVLADAGYNQNGE HHCCEEECCCCCCCCC >Mature Secondary Structure ANLATVERYVSAAAQRGADMVVFPEATMQGFGTGRLDRVAERIDGPFATRICQLARELN CCHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCC IVIVVGMFSPADTHDGKQRINNVALIAHPDSVREYRKIHTYDAFGFKESDTVRPGNQLVT EEEEEEECCCCCCCCHHHHHCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE FPVGDVTCGIAVCYDVRFPQQFIDLARLGAEVIVLPASWADGEGKLEQWRTLTAARALDS EECCCHHEEEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCC TSYIVACDQAVAEDERAPGAPTGVGHSAVVTPDGRRIAEAGTGEELFMVNVNRDLVRRTR CCEEEEECHHHHHHCCCCCCCCCCCCCEEECCCCCEEECCCCCCEEEEEECCHHHHHHHH EAIPVLADAGYNQNGE HHCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]