Definition Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession NC_002935
Length 2,488,635

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The map label for this gene is 38234640

Identifier: 38234640

GI number: 38234640

Start: 2135858

End: 2137066

Strand: Direct

Name: 38234640

Synonym: DIP2083

Alternate gene names: NA

Gene position: 2135858-2137066 (Clockwise)

Preceding gene: 38234634

Following gene: 38234641

Centisome position: 85.82

GC content: 53.52

Gene sequence:

>1209_bases
ATGACCTACGACTATGTCATCGGCATGGACGCCTGCAAATACTTTCACCACGCTTGCGTCTTAGATATCGACGGCACCCA
GGTGCTATCTAAGCGCATCAATCAAAATGAACAATCCCTGCGCGCACTGTTTTCAGCGTTCAGCGCATACGACCACAAGG
TCCTTGTCGTCGTGGACCAGCCCAATAACATTGGGCGACTAACTGTCGCAGTTGCCCAAGATATCGGAATCGACGTGCGC
TACCTTCCAGGTTTGGCTATGCGTCAACTCTCACGCATCCACGCTGGTAATGCCAAAACTGATATCCGGGATGCATATAT
CATCGCCCACGCTGCAAAGAACCTTCCGGAATCCCTCCGCAGTGTCGACCGCGTCGAAGAAGCCTTCCTCCAGTTGAAAG
TCCTCAACGGCATCGACGAAGACTTAGCGCGCTCCTACACCAGGCTCATCAATCAGATTCGAAGTGCATTAGTTGGCTGT
TACCCGCAATTCGAACAAGCCCTTCGCGGCCAGATAATCCACCGCAAGTGGGTTCTGCACCTACTTGCACGCTACGGCGG
GCCCACCAAGATAAAGCGCTTAGGTAAGGCCAAGGCAGCCGCCTTTGCTCGACGATATAAGGCACGAAATCCCGAACCTG
TCCTCGATGCCATATTCGCTGCCATCTCTGAGCAAACAGTCACTATTGCAGGTGCACACTATGCCGAAATGGGCGTAGCA
ATGTCGGCGAAGGACGCACTTTTAAAGCTCGAGCACCGCCAACAAATCGAAAAGGAAGTCATCGAGCTCATCAACGACAT
CCCCCACACCCAATTCCTGCTATCCATGCCGGGAATCGGGCCAAAGACGGCTGCCCAAATTCTTATGACCGCGGGCGATA
TGTCCGACTTTCCGTCAGCTGGGCACCTAGCCTCCTACGCTGGCTTATCGCCCCGAACGAATCAGTCCGGAACCTCAATC
ATGTCGAACTCACTGAACCGAGCCGGCAATAAAAAATTAAAGAACGCCCTATGGCAATCATCTTTTGCATCCATCAGATT
CCACGAGCGTTCCCGGCAATTCTATGAACGAAAGCGCCGTGAAGGCAAAAGGCACAACGCCGCAGTAGTAGCACTAGCCC
GCAGACGACTCAACGTCCTCTACGCCATGATGCGCAACCACGAGCACTACCACGATCCCGCACCATCACAGGAAGACCTA
GCAGCCTAG

Upstream 100 bases:

>100_bases
GTGCGAGGTCTCAAAGTAATGTGGATGCCAGCGTGAAGTATGTCCGACCACCAGCGATGAAATAAGTCCCATACTCATTC
AATTCGCTAGGAGGTCTGGC

Downstream 100 bases:

>100_bases
ACACTAAGAGTAAAGCTAGCCGACCGGGTAAAATCCCAGTCGGCTAGCTGTCATGCCCGAAAACAAACCCGTCCACACAA
CCCCACAGAGAGAATCCGCC

Product: putative transposase for insertion element

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTYDYVIGMDACKYFHHACVLDIDGTQVLSKRINQNEQSLRALFSAFSAYDHKVLVVVDQPNNIGRLTVAVAQDIGIDVR
YLPGLAMRQLSRIHAGNAKTDIRDAYIIAHAAKNLPESLRSVDRVEEAFLQLKVLNGIDEDLARSYTRLINQIRSALVGC
YPQFEQALRGQIIHRKWVLHLLARYGGPTKIKRLGKAKAAAFARRYKARNPEPVLDAIFAAISEQTVTIAGAHYAEMGVA
MSAKDALLKLEHRQQIEKEVIELINDIPHTQFLLSMPGIGPKTAAQILMTAGDMSDFPSAGHLASYAGLSPRTNQSGTSI
MSNSLNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRREGKRHNAAVVALARRRLNVLYAMMRNHEHYHDPAPSQEDL
AA

Sequences:

>Translated_402_residues
MTYDYVIGMDACKYFHHACVLDIDGTQVLSKRINQNEQSLRALFSAFSAYDHKVLVVVDQPNNIGRLTVAVAQDIGIDVR
YLPGLAMRQLSRIHAGNAKTDIRDAYIIAHAAKNLPESLRSVDRVEEAFLQLKVLNGIDEDLARSYTRLINQIRSALVGC
YPQFEQALRGQIIHRKWVLHLLARYGGPTKIKRLGKAKAAAFARRYKARNPEPVLDAIFAAISEQTVTIAGAHYAEMGVA
MSAKDALLKLEHRQQIEKEVIELINDIPHTQFLLSMPGIGPKTAAQILMTAGDMSDFPSAGHLASYAGLSPRTNQSGTSI
MSNSLNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRREGKRHNAAVVALARRRLNVLYAMMRNHEHYHDPAPSQEDL
AA
>Mature_401_residues
TYDYVIGMDACKYFHHACVLDIDGTQVLSKRINQNEQSLRALFSAFSAYDHKVLVVVDQPNNIGRLTVAVAQDIGIDVRY
LPGLAMRQLSRIHAGNAKTDIRDAYIIAHAAKNLPESLRSVDRVEEAFLQLKVLNGIDEDLARSYTRLINQIRSALVGCY
PQFEQALRGQIIHRKWVLHLLARYGGPTKIKRLGKAKAAAFARRYKARNPEPVLDAIFAAISEQTVTIAGAHYAEMGVAM
SAKDALLKLEHRQQIEKEVIELINDIPHTQFLLSMPGIGPKTAAQILMTAGDMSDFPSAGHLASYAGLSPRTNQSGTSIM
SNSLNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRREGKRHNAAVVALARRRLNVLYAMMRNHEHYHDPAPSQEDLA
A

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 45020; Mature: 44889

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYDYVIGMDACKYFHHACVLDIDGTQVLSKRINQNEQSLRALFSAFSAYDHKVLVVVDQ
CCCEEEECHHHHHHHHCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEC
PNNIGRLTVAVAQDIGIDVRYLPGLAMRQLSRIHAGNAKTDIRDAYIIAHAAKNLPESLR
CCCCCCEEEEEHHHCCCCCHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
SVDRVEEAFLQLKVLNGIDEDLARSYTRLINQIRSALVGCYPQFEQALRGQIIHRKWVLH
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LLARYGGPTKIKRLGKAKAAAFARRYKARNPEPVLDAIFAAISEQTVTIAGAHYAEMGVA
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCHHHHHCCH
MSAKDALLKLEHRQQIEKEVIELINDIPHTQFLLSMPGIGPKTAAQILMTAGDMSDFPSA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
GHLASYAGLSPRTNQSGTSIMSNSLNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRR
CCHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGKRHNAAVVALARRRLNVLYAMMRNHEHYHDPAPSQEDLAA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC
>Mature Secondary Structure 
TYDYVIGMDACKYFHHACVLDIDGTQVLSKRINQNEQSLRALFSAFSAYDHKVLVVVDQ
CCEEEECHHHHHHHHCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEC
PNNIGRLTVAVAQDIGIDVRYLPGLAMRQLSRIHAGNAKTDIRDAYIIAHAAKNLPESLR
CCCCCCEEEEEHHHCCCCCHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
SVDRVEEAFLQLKVLNGIDEDLARSYTRLINQIRSALVGCYPQFEQALRGQIIHRKWVLH
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LLARYGGPTKIKRLGKAKAAAFARRYKARNPEPVLDAIFAAISEQTVTIAGAHYAEMGVA
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCHHHHHCCH
MSAKDALLKLEHRQQIEKEVIELINDIPHTQFLLSMPGIGPKTAAQILMTAGDMSDFPSA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
GHLASYAGLSPRTNQSGTSIMSNSLNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRR
CCHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGKRHNAAVVALARRRLNVLYAMMRNHEHYHDPAPSQEDLAA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2821490; 12000953 [H]