| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234640
Identifier: 38234640
GI number: 38234640
Start: 2135858
End: 2137066
Strand: Direct
Name: 38234640
Synonym: DIP2083
Alternate gene names: NA
Gene position: 2135858-2137066 (Clockwise)
Preceding gene: 38234634
Following gene: 38234641
Centisome position: 85.82
GC content: 53.52
Gene sequence:
>1209_bases ATGACCTACGACTATGTCATCGGCATGGACGCCTGCAAATACTTTCACCACGCTTGCGTCTTAGATATCGACGGCACCCA GGTGCTATCTAAGCGCATCAATCAAAATGAACAATCCCTGCGCGCACTGTTTTCAGCGTTCAGCGCATACGACCACAAGG TCCTTGTCGTCGTGGACCAGCCCAATAACATTGGGCGACTAACTGTCGCAGTTGCCCAAGATATCGGAATCGACGTGCGC TACCTTCCAGGTTTGGCTATGCGTCAACTCTCACGCATCCACGCTGGTAATGCCAAAACTGATATCCGGGATGCATATAT CATCGCCCACGCTGCAAAGAACCTTCCGGAATCCCTCCGCAGTGTCGACCGCGTCGAAGAAGCCTTCCTCCAGTTGAAAG TCCTCAACGGCATCGACGAAGACTTAGCGCGCTCCTACACCAGGCTCATCAATCAGATTCGAAGTGCATTAGTTGGCTGT TACCCGCAATTCGAACAAGCCCTTCGCGGCCAGATAATCCACCGCAAGTGGGTTCTGCACCTACTTGCACGCTACGGCGG GCCCACCAAGATAAAGCGCTTAGGTAAGGCCAAGGCAGCCGCCTTTGCTCGACGATATAAGGCACGAAATCCCGAACCTG TCCTCGATGCCATATTCGCTGCCATCTCTGAGCAAACAGTCACTATTGCAGGTGCACACTATGCCGAAATGGGCGTAGCA ATGTCGGCGAAGGACGCACTTTTAAAGCTCGAGCACCGCCAACAAATCGAAAAGGAAGTCATCGAGCTCATCAACGACAT CCCCCACACCCAATTCCTGCTATCCATGCCGGGAATCGGGCCAAAGACGGCTGCCCAAATTCTTATGACCGCGGGCGATA TGTCCGACTTTCCGTCAGCTGGGCACCTAGCCTCCTACGCTGGCTTATCGCCCCGAACGAATCAGTCCGGAACCTCAATC ATGTCGAACTCACTGAACCGAGCCGGCAATAAAAAATTAAAGAACGCCCTATGGCAATCATCTTTTGCATCCATCAGATT CCACGAGCGTTCCCGGCAATTCTATGAACGAAAGCGCCGTGAAGGCAAAAGGCACAACGCCGCAGTAGTAGCACTAGCCC GCAGACGACTCAACGTCCTCTACGCCATGATGCGCAACCACGAGCACTACCACGATCCCGCACCATCACAGGAAGACCTA GCAGCCTAG
Upstream 100 bases:
>100_bases GTGCGAGGTCTCAAAGTAATGTGGATGCCAGCGTGAAGTATGTCCGACCACCAGCGATGAAATAAGTCCCATACTCATTC AATTCGCTAGGAGGTCTGGC
Downstream 100 bases:
>100_bases ACACTAAGAGTAAAGCTAGCCGACCGGGTAAAATCCCAGTCGGCTAGCTGTCATGCCCGAAAACAAACCCGTCCACACAA CCCCACAGAGAGAATCCGCC
Product: putative transposase for insertion element
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTYDYVIGMDACKYFHHACVLDIDGTQVLSKRINQNEQSLRALFSAFSAYDHKVLVVVDQPNNIGRLTVAVAQDIGIDVR YLPGLAMRQLSRIHAGNAKTDIRDAYIIAHAAKNLPESLRSVDRVEEAFLQLKVLNGIDEDLARSYTRLINQIRSALVGC YPQFEQALRGQIIHRKWVLHLLARYGGPTKIKRLGKAKAAAFARRYKARNPEPVLDAIFAAISEQTVTIAGAHYAEMGVA MSAKDALLKLEHRQQIEKEVIELINDIPHTQFLLSMPGIGPKTAAQILMTAGDMSDFPSAGHLASYAGLSPRTNQSGTSI MSNSLNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRREGKRHNAAVVALARRRLNVLYAMMRNHEHYHDPAPSQEDL AA
Sequences:
>Translated_402_residues MTYDYVIGMDACKYFHHACVLDIDGTQVLSKRINQNEQSLRALFSAFSAYDHKVLVVVDQPNNIGRLTVAVAQDIGIDVR YLPGLAMRQLSRIHAGNAKTDIRDAYIIAHAAKNLPESLRSVDRVEEAFLQLKVLNGIDEDLARSYTRLINQIRSALVGC YPQFEQALRGQIIHRKWVLHLLARYGGPTKIKRLGKAKAAAFARRYKARNPEPVLDAIFAAISEQTVTIAGAHYAEMGVA MSAKDALLKLEHRQQIEKEVIELINDIPHTQFLLSMPGIGPKTAAQILMTAGDMSDFPSAGHLASYAGLSPRTNQSGTSI MSNSLNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRREGKRHNAAVVALARRRLNVLYAMMRNHEHYHDPAPSQEDL AA >Mature_401_residues TYDYVIGMDACKYFHHACVLDIDGTQVLSKRINQNEQSLRALFSAFSAYDHKVLVVVDQPNNIGRLTVAVAQDIGIDVRY LPGLAMRQLSRIHAGNAKTDIRDAYIIAHAAKNLPESLRSVDRVEEAFLQLKVLNGIDEDLARSYTRLINQIRSALVGCY PQFEQALRGQIIHRKWVLHLLARYGGPTKIKRLGKAKAAAFARRYKARNPEPVLDAIFAAISEQTVTIAGAHYAEMGVAM SAKDALLKLEHRQQIEKEVIELINDIPHTQFLLSMPGIGPKTAAQILMTAGDMSDFPSAGHLASYAGLSPRTNQSGTSIM SNSLNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRREGKRHNAAVVALARRRLNVLYAMMRNHEHYHDPAPSQEDLA A
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 45020; Mature: 44889
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYDYVIGMDACKYFHHACVLDIDGTQVLSKRINQNEQSLRALFSAFSAYDHKVLVVVDQ CCCEEEECHHHHHHHHCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEC PNNIGRLTVAVAQDIGIDVRYLPGLAMRQLSRIHAGNAKTDIRDAYIIAHAAKNLPESLR CCCCCCEEEEEHHHCCCCCHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH SVDRVEEAFLQLKVLNGIDEDLARSYTRLINQIRSALVGCYPQFEQALRGQIIHRKWVLH HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LLARYGGPTKIKRLGKAKAAAFARRYKARNPEPVLDAIFAAISEQTVTIAGAHYAEMGVA HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCHHHHHCCH MSAKDALLKLEHRQQIEKEVIELINDIPHTQFLLSMPGIGPKTAAQILMTAGDMSDFPSA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC GHLASYAGLSPRTNQSGTSIMSNSLNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRR CCHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGKRHNAAVVALARRRLNVLYAMMRNHEHYHDPAPSQEDLAA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC >Mature Secondary Structure TYDYVIGMDACKYFHHACVLDIDGTQVLSKRINQNEQSLRALFSAFSAYDHKVLVVVDQ CCEEEECHHHHHHHHCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEC PNNIGRLTVAVAQDIGIDVRYLPGLAMRQLSRIHAGNAKTDIRDAYIIAHAAKNLPESLR CCCCCCEEEEEHHHCCCCCHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH SVDRVEEAFLQLKVLNGIDEDLARSYTRLINQIRSALVGCYPQFEQALRGQIIHRKWVLH HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LLARYGGPTKIKRLGKAKAAAFARRYKARNPEPVLDAIFAAISEQTVTIAGAHYAEMGVA HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCHHHHHCCH MSAKDALLKLEHRQQIEKEVIELINDIPHTQFLLSMPGIGPKTAAQILMTAGDMSDFPSA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC GHLASYAGLSPRTNQSGTSIMSNSLNRAGNKKLKNALWQSSFASIRFHERSRQFYERKRR CCHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGKRHNAAVVALARRRLNVLYAMMRNHEHYHDPAPSQEDLAA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2821490; 12000953 [H]