| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234638
Identifier: 38234638
GI number: 38234638
Start: 2131499
End: 2132950
Strand: Reverse
Name: 38234638
Synonym: DIP2080
Alternate gene names: NA
Gene position: 2132950-2131499 (Counterclockwise)
Preceding gene: 38234639
Following gene: 38234637
Centisome position: 85.71
GC content: 55.17
Gene sequence:
>1452_bases GTGACCATTCAATCACTTGCGGAGCTTACAGCAGGCTACGTATCAGGCGTCGAGGTTTCTGCAGATGAGGTTCGTGAAGC CGTGGATGCTGCCCCGCATCAAGTGTTGATTGTCTTGGATGATGATCCAACTGGTACGCAATCCGTTGCGGACTTACCGG TATTGACGCGCTGGACTGAAGCTGATCTTGCATGGGCATTTGAGCAAAATGCACCAGCCATTTACGTCATGACCAATTCT CGTTCATTGGCACCAGTCGACGCGGAGGCTATCAATAGGGAAGTCGCTGATGCGGCTTTCGCGGCTGCCGACGCTCGTGG CATTAGTATCTCATTTGTTTCACGCAGCGATTCGACATTGCGTGGGCACTACCCGCTTGAGCCAGATACCCTCGCCGACA AAGTTGAAGCTCATGGTGCGACCGTCGATGGGTTCGTTATTGTCCCGGCTTTCGGAGATGCTGGTCGTATTACGGTCGGT TCAACTCATTACGCGGGGAGTGCTGCAGGAGGCTTCAAGCCGGTGGGGGAGACCGAGTTTGCGGAAGACGCGACCTTCGG TTATACCAACTCCCGCCTCCCTGAGTGGATTGAAGAGAAGACTAGCGGTGCAGTGAAAGCAGCCCAAGTACTACGTCTTG ATTTGAACGTGATCCGCGCTGGTGCTGACGCAATCGCTGAGGTTCTTCTCCAAGCCAACGATCGCCAGCCTGTCGTCCCA GACATTGTGACTGAGGATGATTTACGACTGCTCTCGCTCGGGCTAATCAAAGCAGAGGCGCAAGGGAAGCACTTCATTTA CCGCGTCGGCCCTCCTTTTGTCCGAGCTCGAATTGGTCAGGATATTTCGGCCCCGTTGACCCCGGCACGGATAGAAGCAG CACGACATTCCTCCACGCAAGGAGAATTTGCAGAGGGCGGACTCATTGTGGTGGGGTCTCACGTGCCAACGACGACACGA CAGCTCAATCAACTTCTCGAAAGGAACAATCCTGCCGTGGTCGAGCTCGACGTTCGCCGTGTCTTGAGTGACGGGAGTGA AGTCTATCTCGCAGAGCTTGTTGATACCGTCACTGCCAAGCTGGCCGCTGGAAACGTTGTGTTTCATACCTCCCGTGAAC TGGTCAAGGGCGAAGATGGCGACGAATCGCTCGCCATCGCCCGTGCCGTCTCTGCTGCATTAGTCGGCACCGTAAATCAA GTCGTTCACCGAGTTACTCCACGCTTCGTTATCGCCAAAGGCGGAATCACCTCATCGGATGTGGCTTCCAAGGGACTCGA AATGACTCGTGCGGTAGTCATCGGGCCAATGCAACCCGGCATCATCTCACTCTGGACCACCCAGGAAGGTCCGGCGACCG GTGTCCCATACATTGTCTTCGCAGGCAATGTCGGAACTGATACGTCGCTTGCTGAGGTCGTGGACACGTTGTCTGCAAGT ACTTCCAGTTAG
Upstream 100 bases:
>100_bases GGCTGGCGGGGGTGAAAAACGGAAAAGTACTTTCCTGCGCCTGCCACGAGCGTTAGTCTTAACCTTAAGTCCTCAGAGGT CTAAGCACTAAGGAGTTAGA
Downstream 100 bases:
>100_bases TCCTTCGATGCTCTAACTGAGTCTCTACGCAAATAAGAAATTATCTCAACACTTTTTAGGAGAATACAATGTCTTTCACT GTTACTGTCGTCGGCATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MTIQSLAELTAGYVSGVEVSADEVREAVDAAPHQVLIVLDDDPTGTQSVADLPVLTRWTEADLAWAFEQNAPAIYVMTNS RSLAPVDAEAINREVADAAFAAADARGISISFVSRSDSTLRGHYPLEPDTLADKVEAHGATVDGFVIVPAFGDAGRITVG STHYAGSAAGGFKPVGETEFAEDATFGYTNSRLPEWIEEKTSGAVKAAQVLRLDLNVIRAGADAIAEVLLQANDRQPVVP DIVTEDDLRLLSLGLIKAEAQGKHFIYRVGPPFVRARIGQDISAPLTPARIEAARHSSTQGEFAEGGLIVVGSHVPTTTR QLNQLLERNNPAVVELDVRRVLSDGSEVYLAELVDTVTAKLAAGNVVFHTSRELVKGEDGDESLAIARAVSAALVGTVNQ VVHRVTPRFVIAKGGITSSDVASKGLEMTRAVVIGPMQPGIISLWTTQEGPATGVPYIVFAGNVGTDTSLAEVVDTLSAS TSS
Sequences:
>Translated_483_residues MTIQSLAELTAGYVSGVEVSADEVREAVDAAPHQVLIVLDDDPTGTQSVADLPVLTRWTEADLAWAFEQNAPAIYVMTNS RSLAPVDAEAINREVADAAFAAADARGISISFVSRSDSTLRGHYPLEPDTLADKVEAHGATVDGFVIVPAFGDAGRITVG STHYAGSAAGGFKPVGETEFAEDATFGYTNSRLPEWIEEKTSGAVKAAQVLRLDLNVIRAGADAIAEVLLQANDRQPVVP DIVTEDDLRLLSLGLIKAEAQGKHFIYRVGPPFVRARIGQDISAPLTPARIEAARHSSTQGEFAEGGLIVVGSHVPTTTR QLNQLLERNNPAVVELDVRRVLSDGSEVYLAELVDTVTAKLAAGNVVFHTSRELVKGEDGDESLAIARAVSAALVGTVNQ VVHRVTPRFVIAKGGITSSDVASKGLEMTRAVVIGPMQPGIISLWTTQEGPATGVPYIVFAGNVGTDTSLAEVVDTLSAS TSS >Mature_482_residues TIQSLAELTAGYVSGVEVSADEVREAVDAAPHQVLIVLDDDPTGTQSVADLPVLTRWTEADLAWAFEQNAPAIYVMTNSR SLAPVDAEAINREVADAAFAAADARGISISFVSRSDSTLRGHYPLEPDTLADKVEAHGATVDGFVIVPAFGDAGRITVGS THYAGSAAGGFKPVGETEFAEDATFGYTNSRLPEWIEEKTSGAVKAAQVLRLDLNVIRAGADAIAEVLLQANDRQPVVPD IVTEDDLRLLSLGLIKAEAQGKHFIYRVGPPFVRARIGQDISAPLTPARIEAARHSSTQGEFAEGGLIVVGSHVPTTTRQ LNQLLERNNPAVVELDVRRVLSDGSEVYLAELVDTVTAKLAAGNVVFHTSRELVKGEDGDESLAIARAVSAALVGTVNQV VHRVTPRFVIAKGGITSSDVASKGLEMTRAVVIGPMQPGIISLWTTQEGPATGVPYIVFAGNVGTDTSLAEVVDTLSAST SS
Specific function: Unknown
COG id: COG3395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50851; Mature: 50719
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQSLAELTAGYVSGVEVSADEVREAVDAAPHQVLIVLDDDPTGTQSVADLPVLTRWTE CCHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCHHEEECC ADLAWAFEQNAPAIYVMTNSRSLAPVDAEAINREVADAAFAAADARGISISFVSRSDSTL CCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCE RGHYPLEPDTLADKVEAHGATVDGFVIVPAFGDAGRITVGSTHYAGSAAGGFKPVGETEF ECCCCCCCHHHHHHHHHCCCEECCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCC AEDATFGYTNSRLPEWIEEKTSGAVKAAQVLRLDLNVIRAGADAIAEVLLQANDRQPVVP CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC DIVTEDDLRLLSLGLIKAEAQGKHFIYRVGPPFVRARIGQDISAPLTPARIEAARHSSTQ CCCCCCCHHHHHHHEEEECCCCCEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCC GEFAEGGLIVVGSHVPTTTRQLNQLLERNNPAVVELDVRRVLSDGSEVYLAELVDTVTAK CCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHH LAAGNVVFHTSRELVKGEDGDESLAIARAVSAALVGTVNQVVHRVTPRFVIAKGGITSSD HHCCCEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH VASKGLEMTRAVVIGPMQPGIISLWTTQEGPATGVPYIVFAGNVGTDTSLAEVVDTLSAS HHHHCHHEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC TSS CCC >Mature Secondary Structure TIQSLAELTAGYVSGVEVSADEVREAVDAAPHQVLIVLDDDPTGTQSVADLPVLTRWTE CHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCHHEEECC ADLAWAFEQNAPAIYVMTNSRSLAPVDAEAINREVADAAFAAADARGISISFVSRSDSTL CCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCE RGHYPLEPDTLADKVEAHGATVDGFVIVPAFGDAGRITVGSTHYAGSAAGGFKPVGETEF ECCCCCCCHHHHHHHHHCCCEECCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCC AEDATFGYTNSRLPEWIEEKTSGAVKAAQVLRLDLNVIRAGADAIAEVLLQANDRQPVVP CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC DIVTEDDLRLLSLGLIKAEAQGKHFIYRVGPPFVRARIGQDISAPLTPARIEAARHSSTQ CCCCCCCHHHHHHHEEEECCCCCEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCC GEFAEGGLIVVGSHVPTTTRQLNQLLERNNPAVVELDVRRVLSDGSEVYLAELVDTVTAK CCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHH LAAGNVVFHTSRELVKGEDGDESLAIARAVSAALVGTVNQVVHRVTPRFVIAKGGITSSD HHCCCEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH VASKGLEMTRAVVIGPMQPGIISLWTTQEGPATGVPYIVFAGNVGTDTSLAEVVDTLSAS HHHHCHHEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC TSS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA