| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234629
Identifier: 38234629
GI number: 38234629
Start: 2125361
End: 2126473
Strand: Direct
Name: 38234629
Synonym: DIP2072
Alternate gene names: NA
Gene position: 2125361-2126473 (Clockwise)
Preceding gene: 38234628
Following gene: 38234630
Centisome position: 85.4
GC content: 50.13
Gene sequence:
>1113_bases ATGAAGAGTTACGAGGCGACAGAGATACTCAGCGATCTCGCATCCCAGCAGTGGGGACTGTTTACCTCGGCGCAGGCAAA AGATAGTGGTGTCGATCTTCCGTCTCTACGCCGATTGGAAAAACGCGGCGTTTTTACCCGCGTTCGACACGGGGTCTATG CGAGTACGACGACTGTATTGTCGACTGAATTAGAGCTCAAAGCCCAGTGGCTTTCCCTACAGCCGAATCTCATGGCAGCT GAGCGCATTAGCGATCCTTCATTAGTTGCTGACGCTGTAGTTTCTCACACTACGGCCGCTGAAGTATGGGAGATAGGGGA TCTCTGGCCCGACGGTATCCACTTTACGGTCAATCGCCGTAGACGAAGCAGGCAGACAGACGTTCAGTTTCACCGCGCCG ATCTCGCCGATTCAGACTGGGTTGTTCACCCTGCATCGGGCCTTCCTATAACCACTGTGCCCCGTACCATCTTGGATCTA GCACAATCTGGACATGAGCCAGACCACTTGCTCCATTTGGTCGCCGATGCAGGAAGGAAATACTTACTGACCGAGCAGGA ATTGCTCGACTCTTTTTCTGGCCATGAAGATTCTTTCGGGCTCGACCAAGGAGACAGATCCGGGCTTAAAGAACTAGTTG ACGAATGCTTCATTGACACGAAGACTGCCCAGCAAACTCGCCTATTGGTAGAAGAAGCAATGCGCCCGCTCCAAGAGCAA CTAGAAGCGATAGTAAAACCACTCACGCAAAGTCTTTCCTGGAAAAATGCCATGCAGGCTCCACTTCAGCAACACTTGGC GCAATTAATCTCACCGATACCATCAGCTATGCAGGTACCAGAAATGACTGTGTTTTCTGAGCTGGCAGAGACGATGAAGA AAACAGCCAGTCTTCCAAACATTTCAAAAAATATGTGGTCTGAAATCTATCCCCCCGAAACACTCTCGTCCGTTCTTTCG ACAAGCCTTCCGCGTACGCAAGTGTCACCTCCTGAAAAACAACGAGAAAGTACCGAGACTAATGAATCAAATTCCGAAGC TAAAAAAGACGCACGGCCAAATCGCCAACGCTTTGAAGAAGGAAGCGAAAACACTCAACAAGAACCCCAATGA
Upstream 100 bases:
>100_bases AATCAGCTTTTGCGGGTACCGTTTCTCTAGGAAGTATTTTTCGATCCATTAAAAATATGATTCATGGCGCAAAAAGTATT CCTGTAGTATTTTTTGAGTC
Downstream 100 bases:
>100_bases CGTGTACAACCAATTCTTCCGAGAAGTCTTTCTACATGAGCTAATGAGACAGCAGAACGGATGGGTACTCAAAGGGGGAA CCAATATCTACTGCCGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MKSYEATEILSDLASQQWGLFTSAQAKDSGVDLPSLRRLEKRGVFTRVRHGVYASTTTVLSTELELKAQWLSLQPNLMAA ERISDPSLVADAVVSHTTAAEVWEIGDLWPDGIHFTVNRRRRSRQTDVQFHRADLADSDWVVHPASGLPITTVPRTILDL AQSGHEPDHLLHLVADAGRKYLLTEQELLDSFSGHEDSFGLDQGDRSGLKELVDECFIDTKTAQQTRLLVEEAMRPLQEQ LEAIVKPLTQSLSWKNAMQAPLQQHLAQLISPIPSAMQVPEMTVFSELAETMKKTASLPNISKNMWSEIYPPETLSSVLS TSLPRTQVSPPEKQRESTETNESNSEAKKDARPNRQRFEEGSENTQQEPQ
Sequences:
>Translated_370_residues MKSYEATEILSDLASQQWGLFTSAQAKDSGVDLPSLRRLEKRGVFTRVRHGVYASTTTVLSTELELKAQWLSLQPNLMAA ERISDPSLVADAVVSHTTAAEVWEIGDLWPDGIHFTVNRRRRSRQTDVQFHRADLADSDWVVHPASGLPITTVPRTILDL AQSGHEPDHLLHLVADAGRKYLLTEQELLDSFSGHEDSFGLDQGDRSGLKELVDECFIDTKTAQQTRLLVEEAMRPLQEQ LEAIVKPLTQSLSWKNAMQAPLQQHLAQLISPIPSAMQVPEMTVFSELAETMKKTASLPNISKNMWSEIYPPETLSSVLS TSLPRTQVSPPEKQRESTETNESNSEAKKDARPNRQRFEEGSENTQQEPQ >Mature_370_residues MKSYEATEILSDLASQQWGLFTSAQAKDSGVDLPSLRRLEKRGVFTRVRHGVYASTTTVLSTELELKAQWLSLQPNLMAA ERISDPSLVADAVVSHTTAAEVWEIGDLWPDGIHFTVNRRRRSRQTDVQFHRADLADSDWVVHPASGLPITTVPRTILDL AQSGHEPDHLLHLVADAGRKYLLTEQELLDSFSGHEDSFGLDQGDRSGLKELVDECFIDTKTAQQTRLLVEEAMRPLQEQ LEAIVKPLTQSLSWKNAMQAPLQQHLAQLISPIPSAMQVPEMTVFSELAETMKKTASLPNISKNMWSEIYPPETLSSVLS TSLPRTQVSPPEKQRESTETNESNSEAKKDARPNRQRFEEGSENTQQEPQ
Specific function: Unknown
COG id: COG5340
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41430; Mature: 41430
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSYEATEILSDLASQQWGLFTSAQAKDSGVDLPSLRRLEKRGVFTRVRHGVYASTTTVL CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH STELELKAQWLSLQPNLMAAERISDPSLVADAVVSHTTAAEVWEIGDLWPDGIHFTVNRR HHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHH RRSRQTDVQFHRADLADSDWVVHPASGLPITTVPRTILDLAQSGHEPDHLLHLVADAGRK HHCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC YLLTEQELLDSFSGHEDSFGLDQGDRSGLKELVDECFIDTKTAQQTRLLVEEAMRPLQEQ EECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LEAIVKPLTQSLSWKNAMQAPLQQHLAQLISPIPSAMQVPEMTVFSELAETMKKTASLPN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCCCC ISKNMWSEIYPPETLSSVLSTSLPRTQVSPPEKQRESTETNESNSEAKKDARPNRQRFEE HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHC GSENTQQEPQ CCCCCCCCCC >Mature Secondary Structure MKSYEATEILSDLASQQWGLFTSAQAKDSGVDLPSLRRLEKRGVFTRVRHGVYASTTTVL CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH STELELKAQWLSLQPNLMAAERISDPSLVADAVVSHTTAAEVWEIGDLWPDGIHFTVNRR HHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHH RRSRQTDVQFHRADLADSDWVVHPASGLPITTVPRTILDLAQSGHEPDHLLHLVADAGRK HHCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC YLLTEQELLDSFSGHEDSFGLDQGDRSGLKELVDECFIDTKTAQQTRLLVEEAMRPLQEQ EECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LEAIVKPLTQSLSWKNAMQAPLQQHLAQLISPIPSAMQVPEMTVFSELAETMKKTASLPN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCCCC ISKNMWSEIYPPETLSSVLSTSLPRTQVSPPEKQRESTETNESNSEAKKDARPNRQRFEE HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHC GSENTQQEPQ CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA