| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234617
Identifier: 38234617
GI number: 38234617
Start: 2109022
End: 2110452
Strand: Reverse
Name: 38234617
Synonym: DIP2060
Alternate gene names: NA
Gene position: 2110452-2109022 (Counterclockwise)
Preceding gene: 38234618
Following gene: 38234614
Centisome position: 84.8
GC content: 53.67
Gene sequence:
>1431_bases ATGTTTAATGCCAAAGTTTTCCGTTTTATTCTTGCCGCTGCGGTATTCGTCATCATGGCGTTTCCTGTCGGCGTGGCCAA CATTTACCTCGGATTCTTCCACGGTGAAGCCCCATGTATTTTGTGCGGTAATGAGCGCTTCGGCATGGTTTTGATTGGCG CTTTGGGTGTCTTTATCCTGCGTTATGGCGCACGTATGCGCTACATTGTCACTTTGCTTTTAGTGGCTTTCTACTATCTT TACACCACGGTTCGCCACTGGGGTGGCCGCGCCAGCGCTGATTTGGGTCAGGGCTTCGGTGACGCTGTGCTCGGTGTACA CACCTACACATGGGGCATTCTGGTCTACTGGGTTGTTATCGGCGTTCTTGCCATTGGCTTGATCTTCATCGGTAAGGATA AGGCACTCCAACAGGAGTTCATTTCCTCTGAGGCTGTGGTTAAGGATTTCGGTCCTGCTACTCGTTTTGTTGCTATCGTT GCGATTGTGATTACGTGCTCTAACTGTGTGCAGTTCCTCTTCGGCAATGGTATTCCACCTTATGCCGGTGCTGGCGACCC AGCTCGTTTTACCTTTAACATTGTGCAGAATGCTAAGTACTGGGACAAGGAGCACCAGTATGAGTCTTTGTCTGACATTC GTTTGCACAAGTTCAATGCGCCAGCGCCTGGCACCTTCGATTTCGATGAGTCGCCTGTAGACGGCAAGAAGTTGGAGCTG GTTTCTTCGAAGAAGATCGGCTTTGACGGCAAGTTCGCTGGTATCGCTCACGATGGTGAGCAGTTCGGCTTGGTCACCCA GGATGGTTCCTTGTTCTTTACCAAGGACTTCGACAAGGCAACGTCGTTTGCTCACCTCGATGTTCCTAATGGTTCGGACA TCCACAACACTGTCGACGCCGCCTTCTTCGAGCCTGGTGGCCTCGCAGGTATCGCGCAGAACAAGACCCTCTACGGTGCA CTGGTAACCAAGGATGTGGACGATTACATCGCGTGGAAAGACTTCCTCGAGTCCTCCGGCGACGTGATGCCACTGTTCGA TTCCAAGGGCCGCCCAGAGTTGCGCACCATCCGCGCACGCATGCAATACACCATGAGCGTTGCATCCGATGCTAAGAGCG ACACTTTCATCACCGTGAGCGTTCCTCACGAGCGCGCTGAGCAGATCGTGGTGAGCGAGTTCTCCAAGAAGGACAACAAG CTGGTCCGCGAAGGCGTCCTCGACGGCGACTACTACCCAGTCGGTGCCGACATGCGTGGCGACGTCCTCTACCTACTGTC CAAGCAACACAACTGCCTCGTTCGCGTGAACATGAAAGACTTCACCGTCAAGGACGCAGCCAACCTCCCTGTAGAAGGCT CCGACCTTGCCATCGTGAAGGACCGCGCCTACATCCTCGACGGCGACACCGTCCACGAAGTGAAGCTCTAA
Upstream 100 bases:
>100_bases AAAGTTGGCATTTGGCCTGCTCGTAGCGTCTTTTGCTATGTCTGTTCTCATGTTCTTTATGGGTTCTGCAACGTCGATTG TTCCGGCGGTGAATCTCTAA
Downstream 100 bases:
>100_bases CTCCACTTCCAACACCCGCGGTGCCACATCGCGGACGCATCAAAAGGGTAGCCTCGAGCAGGGGCTACCCTTATTGCTGC TTGCACTTGGTCCACAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: DsbB Family Disulfide Bond Formation Protein; Disulfide Bond Formation Protein DsbB Family; Disulfide Bond Formation Protein; Disulfide Bond Formation Protein DsbB; Dsbb-Like Protein
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MFNAKVFRFILAAAVFVIMAFPVGVANIYLGFFHGEAPCILCGNERFGMVLIGALGVFILRYGARMRYIVTLLLVAFYYL YTTVRHWGGRASADLGQGFGDAVLGVHTYTWGILVYWVVIGVLAIGLIFIGKDKALQQEFISSEAVVKDFGPATRFVAIV AIVITCSNCVQFLFGNGIPPYAGAGDPARFTFNIVQNAKYWDKEHQYESLSDIRLHKFNAPAPGTFDFDESPVDGKKLEL VSSKKIGFDGKFAGIAHDGEQFGLVTQDGSLFFTKDFDKATSFAHLDVPNGSDIHNTVDAAFFEPGGLAGIAQNKTLYGA LVTKDVDDYIAWKDFLESSGDVMPLFDSKGRPELRTIRARMQYTMSVASDAKSDTFITVSVPHERAEQIVVSEFSKKDNK LVREGVLDGDYYPVGADMRGDVLYLLSKQHNCLVRVNMKDFTVKDAANLPVEGSDLAIVKDRAYILDGDTVHEVKL
Sequences:
>Translated_476_residues MFNAKVFRFILAAAVFVIMAFPVGVANIYLGFFHGEAPCILCGNERFGMVLIGALGVFILRYGARMRYIVTLLLVAFYYL YTTVRHWGGRASADLGQGFGDAVLGVHTYTWGILVYWVVIGVLAIGLIFIGKDKALQQEFISSEAVVKDFGPATRFVAIV AIVITCSNCVQFLFGNGIPPYAGAGDPARFTFNIVQNAKYWDKEHQYESLSDIRLHKFNAPAPGTFDFDESPVDGKKLEL VSSKKIGFDGKFAGIAHDGEQFGLVTQDGSLFFTKDFDKATSFAHLDVPNGSDIHNTVDAAFFEPGGLAGIAQNKTLYGA LVTKDVDDYIAWKDFLESSGDVMPLFDSKGRPELRTIRARMQYTMSVASDAKSDTFITVSVPHERAEQIVVSEFSKKDNK LVREGVLDGDYYPVGADMRGDVLYLLSKQHNCLVRVNMKDFTVKDAANLPVEGSDLAIVKDRAYILDGDTVHEVKL >Mature_476_residues MFNAKVFRFILAAAVFVIMAFPVGVANIYLGFFHGEAPCILCGNERFGMVLIGALGVFILRYGARMRYIVTLLLVAFYYL YTTVRHWGGRASADLGQGFGDAVLGVHTYTWGILVYWVVIGVLAIGLIFIGKDKALQQEFISSEAVVKDFGPATRFVAIV AIVITCSNCVQFLFGNGIPPYAGAGDPARFTFNIVQNAKYWDKEHQYESLSDIRLHKFNAPAPGTFDFDESPVDGKKLEL VSSKKIGFDGKFAGIAHDGEQFGLVTQDGSLFFTKDFDKATSFAHLDVPNGSDIHNTVDAAFFEPGGLAGIAQNKTLYGA LVTKDVDDYIAWKDFLESSGDVMPLFDSKGRPELRTIRARMQYTMSVASDAKSDTFITVSVPHERAEQIVVSEFSKKDNK LVREGVLDGDYYPVGADMRGDVLYLLSKQHNCLVRVNMKDFTVKDAANLPVEGSDLAIVKDRAYILDGDTVHEVKL
Specific function: Unknown
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52435; Mature: 52435
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNAKVFRFILAAAVFVIMAFPVGVANIYLGFFHGEAPCILCGNERFGMVLIGALGVFIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECCCCCCHHHHHHHHHHHH RYGARMRYIVTLLLVAFYYLYTTVRHWGGRASADLGQGFGDAVLGVHTYTWGILVYWVVI HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHH GVLAIGLIFIGKDKALQQEFISSEAVVKDFGPATRFVAIVAIVITCSNCVQFLFGNGIPP HHHHHHHEEECCCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YAGAGDPARFTFNIVQNAKYWDKEHQYESLSDIRLHKFNAPAPGTFDFDESPVDGKKLEL CCCCCCCCEEEEEEECCCHHCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCEEEE VSSKKIGFDGKFAGIAHDGEQFGLVTQDGSLFFTKDFDKATSFAHLDVPNGSDIHNTVDA EECCCCCCCCCEECEEECCCCEEEEEECCCEEEEECCCCCCCEEEEECCCCCCCHHHHHH AFFEPGGLAGIAQNKTLYGALVTKDVDDYIAWKDFLESSGDVMPLFDSKGRPELRTIRAR HEECCCCCEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHH MQYTMSVASDAKSDTFITVSVPHERAEQIVVSEFSKKDNKLVREGVLDGDYYPVGADMRG HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC DVLYLLSKQHNCLVRVNMKDFTVKDAANLPVEGSDLAIVKDRAYILDGDTVHEVKL CEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCEEEEECCEEEECCCCEEEECC >Mature Secondary Structure MFNAKVFRFILAAAVFVIMAFPVGVANIYLGFFHGEAPCILCGNERFGMVLIGALGVFIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECCCCCCHHHHHHHHHHHH RYGARMRYIVTLLLVAFYYLYTTVRHWGGRASADLGQGFGDAVLGVHTYTWGILVYWVVI HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHH GVLAIGLIFIGKDKALQQEFISSEAVVKDFGPATRFVAIVAIVITCSNCVQFLFGNGIPP HHHHHHHEEECCCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YAGAGDPARFTFNIVQNAKYWDKEHQYESLSDIRLHKFNAPAPGTFDFDESPVDGKKLEL CCCCCCCCEEEEEEECCCHHCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCEEEE VSSKKIGFDGKFAGIAHDGEQFGLVTQDGSLFFTKDFDKATSFAHLDVPNGSDIHNTVDA EECCCCCCCCCEECEEECCCCEEEEEECCCEEEEECCCCCCCEEEEECCCCCCCHHHHHH AFFEPGGLAGIAQNKTLYGALVTKDVDDYIAWKDFLESSGDVMPLFDSKGRPELRTIRAR HEECCCCCEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHH MQYTMSVASDAKSDTFITVSVPHERAEQIVVSEFSKKDNKLVREGVLDGDYYPVGADMRG HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC DVLYLLSKQHNCLVRVNMKDFTVKDAANLPVEGSDLAIVKDRAYILDGDTVHEVKL CEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCEEEEECCEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA