| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234587
Identifier: 38234587
GI number: 38234587
Start: 2076614
End: 2077324
Strand: Direct
Name: 38234587
Synonym: DIP2023
Alternate gene names: NA
Gene position: 2076614-2077324 (Clockwise)
Preceding gene: 38234579
Following gene: 38234591
Centisome position: 83.44
GC content: 56.4
Gene sequence:
>711_bases ATGAGAGACAATACTCACTCCCTTGAAGGAGTTGCGCGGCTCCTGCTCCGTTCTGAGGCTGTCGCTTCCTCCCGGATCGA GGGAATCGCTCCCAACTCCGACAAAGTGGCTATGGCGATCCTTGCGCGTGAATCAGATTCCGAAATTCGGGGTTTCAAAG AATCCGCAACAGCTGTCGCCCGCAATGTCGCCATCCTCGACACCATCAATGCAGACTTGGCTTACAAAGACGAGCTGGTC CTGGATGACATTGTTGCGATGCAGACAGCGCTCGTTCATGCACAGTTCGAGACCATCCACCCATTCCCGGATGGGAATGG ACGCGTAGGGCGAGCCATGATTCACGCGCTTTTGCAGCGCAGAGGGCTCACCGATGCTGCGGTTCTCCCCGTCAGTATGG TTCTGGCAACGCTCGGTGACCGTTACGTCGACGGACTCACGAAATTCCGCGAGGGTGACGTGCTGGCATGGATCTCTTTC TTCGTCGAGGCTGCACAAGTCGCCACCACCAAAGCAGCTGAACTTGCGGATAGCGTCGCCGCCCTAGAAGCAGAATGGAT GGACAAGGTCAATCACCACCGCACTGCGCAAGAAGCTTCCTGCCATGCCTTTGGTCACGGTGCCCATCGTGAAGTCCGAA CTGGGGATTTCATCGACAAACACGGTCCGAGATGCTCTCGATTCACTCACCGACGCTGGCATTCTACGTAA
Upstream 100 bases:
>100_bases GCAGTGACTCACGATAAGAGTTATCTGGCGCATTGCGCTCGCAGTCCACCGGGATAAGTCTTATCCCCAATGCATCGAGC GGGAGATTCACAATCTTGAG
Downstream 100 bases:
>100_bases GAAAGTAATCGGTGTGGGCGGGCTTCTCGGTTACTTCGCTAACGACGTTTTCATGTTGGTCGACGATGCTGAACGCCAAC TCGCCTTTCACCTCCGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: Fic Protein; Fic Family Protein; Cell Filamentation CAMP-Inducing Protein Fic; Filamentation Induced By Camp Protein Fic; Fic Protein Family Protein
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MRDNTHSLEGVARLLLRSEAVASSRIEGIAPNSDKVAMAILARESDSEIRGFKESATAVARNVAILDTINADLAYKDELV LDDIVAMQTALVHAQFETIHPFPDGNGRVGRAMIHALLQRRGLTDAAVLPVSMVLATLGDRYVDGLTKFREGDVLAWISF FVEAAQVATTKAAELADSVAALEAEWMDKVNHHRTAQEASCHAFGHGAHREVRTGDFIDKHGPRCSRFTHRRWHST
Sequences:
>Translated_236_residues MRDNTHSLEGVARLLLRSEAVASSRIEGIAPNSDKVAMAILARESDSEIRGFKESATAVARNVAILDTINADLAYKDELV LDDIVAMQTALVHAQFETIHPFPDGNGRVGRAMIHALLQRRGLTDAAVLPVSMVLATLGDRYVDGLTKFREGDVLAWISF FVEAAQVATTKAAELADSVAALEAEWMDKVNHHRTAQEASCHAFGHGAHREVRTGDFIDKHGPRCSRFTHRRWHST >Mature_236_residues MRDNTHSLEGVARLLLRSEAVASSRIEGIAPNSDKVAMAILARESDSEIRGFKESATAVARNVAILDTINADLAYKDELV LDDIVAMQTALVHAQFETIHPFPDGNGRVGRAMIHALLQRRGLTDAAVLPVSMVLATLGDRYVDGLTKFREGDVLAWISF FVEAAQVATTKAAELADSVAALEAEWMDKVNHHRTAQEASCHAFGHGAHREVRTGDFIDKHGPRCSRFTHRRWHST
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25905; Mature: 25905
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDNTHSLEGVARLLLRSEAVASSRIEGIAPNSDKVAMAILARESDSEIRGFKESATAVA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH RNVAILDTINADLAYKDELVLDDIVAMQTALVHAQFETIHPFPDGNGRVGRAMIHALLQR HHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH RGLTDAAVLPVSMVLATLGDRYVDGLTKFREGDVLAWISFFVEAAQVATTKAAELADSVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALEAEWMDKVNHHRTAQEASCHAFGHGAHREVRTGDFIDKHGPRCSRFTHRRWHST HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCC >Mature Secondary Structure MRDNTHSLEGVARLLLRSEAVASSRIEGIAPNSDKVAMAILARESDSEIRGFKESATAVA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH RNVAILDTINADLAYKDELVLDDIVAMQTALVHAQFETIHPFPDGNGRVGRAMIHALLQR HHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH RGLTDAAVLPVSMVLATLGDRYVDGLTKFREGDVLAWISFFVEAAQVATTKAAELADSVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALEAEWMDKVNHHRTAQEASCHAFGHGAHREVRTGDFIDKHGPRCSRFTHRRWHST HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA