| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234555
Identifier: 38234555
GI number: 38234555
Start: 2040971
End: 2041939
Strand: Direct
Name: 38234555
Synonym: DIP1991
Alternate gene names: NA
Gene position: 2040971-2041939 (Clockwise)
Preceding gene: 38234552
Following gene: 38234556
Centisome position: 82.01
GC content: 57.48
Gene sequence:
>969_bases ATGCCCACCAACTCCCCCGTCACCAACACTCAACCCGTTGGACATGAAGGCACCCGCGTTCAAATCTCCGAAAAGCAGCC ATGGACCGGCGGCACCGGCCTAGCGCTTGGTATTCTCACGCTGGGCAGCGTCGTTTTCATCGCCGCTATCACCATGATCA TCATGGCGGCCGAGAAAATGGATTCCGCAGCCGGCTCCGCCTCACCGGCAATGGTCGCCATGCTTATAGCGGGCATTATC CTTATCCCCCTTGCCGTTGTAGCCCTGAGCATGGTGCGCGTGACCTCCCCTGGCCACACTCGAGTGGTGCAGCTTTTTGG CCGCTACTTGGGCACTTCTCGCATCACCGGCCTTTCCGTGGTGCCACCACTGAGCACCACCACCAAGGTGTCAGTACGTG TACGCAACTTTGAAACAAACGAGATCAAGGTCAACGATCTCAACGGAAATCCCGTCAACATCGGTGCGATCATCGTCTGG CAGGTGGCAGACACCGCCCAGGCAACCTTCGCGGTTGAAGACATGGAAGAGTTCATCCACTCCCAGTCCGAATCGGCGCT GCGCCACGTTGCCACCACCCACCCATATGATGGCGGCACAGCCAAAGCGCCTTCCCTTTCCGGCTCCACCGAGCTGGTAT CCCAAGAGCTTGCCGACGAAGTAGCAGCACGCGTTGCTGTGGCCGGACTCGAGATCATCGAGGCTCGTATTTCCAACCTT TCTTATGCTCCCGAGATCGCCCAGTCGATGTTGCAACGCCAGCAGGCCGGCGCGATCGTGGATGCCCGCGAGACGATCGT TGAAGGTGCCGTATCCATGGTGGAAAGCGCTTTGGAACAGTTGGAGTCTCGTGAGATTGTTAACCTTGACCCAGAACGAC GCGCTGCGATGGTATCGAATCTGCTCGTAGTATTGTGTTCTGACAACAATGCCCAACCCGTTCTCAACACAGGCAGCCTT TATACCTAA
Upstream 100 bases:
>100_bases TCGCCACCCCTTAAAAAAGTGATATCACTTAAATTAAAGTGATATCAGTTTTAACACACTCCCCTCATCGGCCCCCACCT TGAAAGGAGCGCCCCATACC
Downstream 100 bases:
>100_bases TGCCCCGTAAAAATATTCCGCTTCGCATCGATCCCGCTGTGGCCGATGCGATTTCGCGGTGGGCGCAGGACGAAACACGT AGCGTGAATTCCCAAATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; SPFH Domain/Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Somatin-Like Protein; Band 7 Family Protein; SPFH Domain / Band 7 Family Protein; SPFH Domain-Containing Protein; Integral Membrane Protease Subunit; SPFH/Band 7 Domain-Containing Protein; Transmembrane Protein; HFLK Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Membrane Protease Subunits Stomatin/Prohibitin Homologs; Band 7 Family Membrane Protein; Membrane Protease Subunit Stomatin/Prohibitin
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MPTNSPVTNTQPVGHEGTRVQISEKQPWTGGTGLALGILTLGSVVFIAAITMIIMAAEKMDSAAGSASPAMVAMLIAGII LIPLAVVALSMVRVTSPGHTRVVQLFGRYLGTSRITGLSVVPPLSTTTKVSVRVRNFETNEIKVNDLNGNPVNIGAIIVW QVADTAQATFAVEDMEEFIHSQSESALRHVATTHPYDGGTAKAPSLSGSTELVSQELADEVAARVAVAGLEIIEARISNL SYAPEIAQSMLQRQQAGAIVDARETIVEGAVSMVESALEQLESREIVNLDPERRAAMVSNLLVVLCSDNNAQPVLNTGSL YT
Sequences:
>Translated_322_residues MPTNSPVTNTQPVGHEGTRVQISEKQPWTGGTGLALGILTLGSVVFIAAITMIIMAAEKMDSAAGSASPAMVAMLIAGII LIPLAVVALSMVRVTSPGHTRVVQLFGRYLGTSRITGLSVVPPLSTTTKVSVRVRNFETNEIKVNDLNGNPVNIGAIIVW QVADTAQATFAVEDMEEFIHSQSESALRHVATTHPYDGGTAKAPSLSGSTELVSQELADEVAARVAVAGLEIIEARISNL SYAPEIAQSMLQRQQAGAIVDARETIVEGAVSMVESALEQLESREIVNLDPERRAAMVSNLLVVLCSDNNAQPVLNTGSL YT >Mature_321_residues PTNSPVTNTQPVGHEGTRVQISEKQPWTGGTGLALGILTLGSVVFIAAITMIIMAAEKMDSAAGSASPAMVAMLIAGIIL IPLAVVALSMVRVTSPGHTRVVQLFGRYLGTSRITGLSVVPPLSTTTKVSVRVRNFETNEIKVNDLNGNPVNIGAIIVWQ VADTAQATFAVEDMEEFIHSQSESALRHVATTHPYDGGTAKAPSLSGSTELVSQELADEVAARVAVAGLEIIEARISNLS YAPEIAQSMLQRQQAGAIVDARETIVEGAVSMVESALEQLESREIVNLDPERRAAMVSNLLVVLCSDNNAQPVLNTGSLY T
Specific function: Unknown
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33981; Mature: 33850
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNSPVTNTQPVGHEGTRVQISEKQPWTGGTGLALGILTLGSVVFIAAITMIIMAAEKM CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSAAGSASPAMVAMLIAGIILIPLAVVALSMVRVTSPGHTRVVQLFGRYLGTSRITGLSV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEE VPPLSTTTKVSVRVRNFETNEIKVNDLNGNPVNIGAIIVWQVADTAQATFAVEDMEEFIH CCCCCCCEEEEEEEEECCCCEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHH SQSESALRHVATTHPYDGGTAKAPSLSGSTELVSQELADEVAARVAVAGLEIIEARISNL CCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SYAPEIAQSMLQRQQAGAIVDARETIVEGAVSMVESALEQLESREIVNLDPERRAAMVSN CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC LLVVLCSDNNAQPVLNTGSLYT EEEEEECCCCCCCEECCCCCCC >Mature Secondary Structure PTNSPVTNTQPVGHEGTRVQISEKQPWTGGTGLALGILTLGSVVFIAAITMIIMAAEKM CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSAAGSASPAMVAMLIAGIILIPLAVVALSMVRVTSPGHTRVVQLFGRYLGTSRITGLSV HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEE VPPLSTTTKVSVRVRNFETNEIKVNDLNGNPVNIGAIIVWQVADTAQATFAVEDMEEFIH CCCCCCCEEEEEEEEECCCCEEEEEECCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHH SQSESALRHVATTHPYDGGTAKAPSLSGSTELVSQELADEVAARVAVAGLEIIEARISNL CCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SYAPEIAQSMLQRQQAGAIVDARETIVEGAVSMVESALEQLESREIVNLDPERRAAMVSN CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC LLVVLCSDNNAQPVLNTGSLYT EEEEEECCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA