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The map label for this gene is 38234553

Identifier: 38234553

GI number: 38234553

Start: 2038819

End: 2039577

Strand: Reverse

Name: 38234553

Synonym: DIP1989

Alternate gene names: NA

Gene position: 2039577-2038819 (Counterclockwise)

Preceding gene: 38234554

Following gene: 38234551

Centisome position: 81.96

GC content: 54.81

Gene sequence:

>759_bases
ATGAATATTCGGTTTGGTCTCATAGACGTCAAGCGCATCGTGCGTAATCCGGCGAACCTGGTATTCGCAATCTTGCTGCC
AGCGGGAATGTACATCCTTTTTGGTGCTATCCAAAGTTATGGGGAGATCAAGCTGGGGCACGGCAATGTACGCGCGACAG
TGATGGCATCGATGGCTGCCTATGGTTCTGTCACCGTGGCGACGAGCCTTGCTGCCGCTTCGGCGCTGGAGCAGGAAAAA
GGCTGGGGACGCCAGTTGGCGATGACCCCTCTCGTTGGCGGGAAATACATTGCTACCAAGGTATTTACGGTTTTGGTGGT
TTCCCTTGCCCCAGTCATCGTGGTGTACGCCATCGGCGCTTTGACGACGGCCGAGATAGAAGGCGATCTTCGGTGGGCTT
TGGCGTTCTTAGCGTCATGGCTTACGGCGGTACCTTTTGCGCTCTTTGGGCTGGGAATCGCACTGCTTATTCGCGGTGAG
GCTGCCTTGTCCATTGCCTCTTTTGGCGTACTGATCTGCGCATTTTTGTCCAACATGTTCATTCCGCTCAGCGGATTTTT
GCTCTCCATGTCACGTTTCATGCCGCTCTACGGGGTAAATAAACTAGCTCGTTTTCCTATATCTGGCGCAGAAGAGGCCG
CTGCGGATGGGACGTTAGCCTCTGCTCCCCTGTGGTGGGCCGTAGCGAATATCACCGCGTGGGCTGTTGTGTTTGCGCTA
CTAGCCTTCGCGGCGTCGAAACGCCAGCAAAAACGATAA

Upstream 100 bases:

>100_bases
ATCGCACATCTGCTTATGACTTGTTAGTTTCAACGACATCGCTTGAAGACGCATTTATTGAGCTGACTCATTCACGCGAT
GCTAAGGCAAAGGACGCAGC

Downstream 100 bases:

>100_bases
AGGTAGTGCCTTGGAGTGGTTACGCAAAGGGGTGGCACGTCGTTTCTAATGGGTTTATGATGCCACCGGTTGCTTGGCTG
CAAAGCTGGGCGGGTCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC Transport System Permease Protein; ABC-Type Multidrug Transport System Permease Component; ABC Transporter Permease; ABC Transporter; ABC Drug Resistance Transporter Inner Membrane Subunit; Multidrug ABC Transporter Permease

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MNIRFGLIDVKRIVRNPANLVFAILLPAGMYILFGAIQSYGEIKLGHGNVRATVMASMAAYGSVTVATSLAAASALEQEK
GWGRQLAMTPLVGGKYIATKVFTVLVVSLAPVIVVYAIGALTTAEIEGDLRWALAFLASWLTAVPFALFGLGIALLIRGE
AALSIASFGVLICAFLSNMFIPLSGFLLSMSRFMPLYGVNKLARFPISGAEEAAADGTLASAPLWWAVANITAWAVVFAL
LAFAASKRQQKR

Sequences:

>Translated_252_residues
MNIRFGLIDVKRIVRNPANLVFAILLPAGMYILFGAIQSYGEIKLGHGNVRATVMASMAAYGSVTVATSLAAASALEQEK
GWGRQLAMTPLVGGKYIATKVFTVLVVSLAPVIVVYAIGALTTAEIEGDLRWALAFLASWLTAVPFALFGLGIALLIRGE
AALSIASFGVLICAFLSNMFIPLSGFLLSMSRFMPLYGVNKLARFPISGAEEAAADGTLASAPLWWAVANITAWAVVFAL
LAFAASKRQQKR
>Mature_252_residues
MNIRFGLIDVKRIVRNPANLVFAILLPAGMYILFGAIQSYGEIKLGHGNVRATVMASMAAYGSVTVATSLAAASALEQEK
GWGRQLAMTPLVGGKYIATKVFTVLVVSLAPVIVVYAIGALTTAEIEGDLRWALAFLASWLTAVPFALFGLGIALLIRGE
AALSIASFGVLICAFLSNMFIPLSGFLLSMSRFMPLYGVNKLARFPISGAEEAAADGTLASAPLWWAVANITAWAVVFAL
LAFAASKRQQKR

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26731; Mature: 26731

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRFGLIDVKRIVRNPANLVFAILLPAGMYILFGAIQSYGEIKLGHGNVRATVMASMAA
CCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHH
YGSVTVATSLAAASALEQEKGWGRQLAMTPLVGGKYIATKVFTVLVVSLAPVIVVYAIGA
HCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTTAEIEGDLRWALAFLASWLTAVPFALFGLGIALLIRGEAALSIASFGVLICAFLSNMF
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
IPLSGFLLSMSRFMPLYGVNKLARFPISGAEEAAADGTLASAPLWWAVANITAWAVVFAL
HHHHHHHHHHHHHCHHHCHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
LAFAASKRQQKR
HHHHHHHHHCCC
>Mature Secondary Structure
MNIRFGLIDVKRIVRNPANLVFAILLPAGMYILFGAIQSYGEIKLGHGNVRATVMASMAA
CCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHH
YGSVTVATSLAAASALEQEKGWGRQLAMTPLVGGKYIATKVFTVLVVSLAPVIVVYAIGA
HCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTTAEIEGDLRWALAFLASWLTAVPFALFGLGIALLIRGEAALSIASFGVLICAFLSNMF
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
IPLSGFLLSMSRFMPLYGVNKLARFPISGAEEAAADGTLASAPLWWAVANITAWAVVFAL
HHHHHHHHHHHHHCHHHCHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
LAFAASKRQQKR
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA