| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
Click here to switch to the map view.
The map label for this gene is 38234528
Identifier: 38234528
GI number: 38234528
Start: 2012164
End: 2013708
Strand: Direct
Name: 38234528
Synonym: DIP1964
Alternate gene names: NA
Gene position: 2012164-2013708 (Clockwise)
Preceding gene: 38234527
Following gene: 38234529
Centisome position: 80.85
GC content: 54.37
Gene sequence:
>1545_bases GTGGGTCTGTTTGAGAAGCTGCGTGGTTGGTTTGCAGGTTCTGGCCGTATTGCGACGATTGATGCTGTGAAGGCTGCGCC GCCGCCCTCGCCATTGGCCCCTATTGATTTGACGGATCCTGCTCAGGTGGCGGGTGTGATGGATTTGGCGGCTCGTATTG GTGACATTTTATTGTCGGCGGGTACAGCGAATCGTGATACGAAGGCACAGATTCACGCGGTGACAGCTGCTTATGGTTTG TTGTATTGCCATGTGGATATCACGTTGAACACGATTACGGTGTTTACCACTATTGGGTCTGAGAAGAAGATCCCGGTGAG TGTTTTTCGTGTTGTGCGCTCGATGAATACTGATTTTTCTAAGTTGAGCGAGGTTGACCGGTTGATTCGGTCGATTCAGG CGGGCGCTACTCCCCCTGATGTAGCTGAGAAGATTTTGAATGAGCTGTTTCAGACTCGGGCGAAGTATCGCTTCCGTACA GCAGTGTTTGGGTGGGGGTTTTTGGGCGCTGCGGTGTCGGTGTTGTTGGGGGGTTCGTGGCTGGTGGCGTTGGCGTCGTT TGTGGTGGCGTTGGTGATTATGGGCGGTAGTGTGTGGCTGGATCGTAATTCGTTGCCGTTGTTTTTCCAGAATATTTTTG GTGGTTTCATTGCGACGTTTCCAGCGGCGTTGCTTTATAGTGCGGTGACGTCGCATGGGGTGTCTATTTCGCCGAGTCAT ATTGTTGCTGCTGGCATTGTGGTGATGATGGCGAATTTGACGATGGTGCAGTCGTTGCAGGATGGCATTACGGGTGCTCC GGTGACGGCGAGTGCGCGCTTTTTTGAGACGTTGCTGATTACTGGCGCGATTGTGGCTGGTGTTGGTGCGGGTATCCAGT TGGCGGCGTCGTTGGGTATTACGTTGCCGCCGTTGGAGCAGGCTGCGTTGTTGGGCGGTAGTCCGTCGTGGGTGAAAGTG TTTGCTGGTGCTGCGGCGTCGGCGGCTTTTGCGGTGGGTTGTTATGCGGAGTTGTCTGCGGTGGTGGTGTCTGGTTTGAC TGCTGCTGCGGGTTCGTTTGTGTATTACTACTTGTTGATTCCGGCGGGTATTGGCCCTGTGGTTGCTACGGCGATTGCGG CGACGTGTATTGGTTTTGGTGGCGGTTTGTTGGCGCGTAGGTTTTTGATTCCGCCGTTGATTACTGCGGTTGCTGGTATT ACGCCGATGTTGCCGGGTTTGTCGATTTATCGGGGTATGTATGCGGCGTTGAATGAGCAGACGTTGCTAGGTTTCACGAA CGTGGCTATGGCGTTGTCTATTTGTTGTTCGTTGGCTGCTGGTGTGGTGTTGGGCGAGTGGGTTGCGCGTCGTATTCGCA GGCCACAGAGTTTCAAGCCGTATACGGCTTTTCGACGTTCCCAGCGTTATTCTTTCCGTCAGGCCCAGTTGGCGGCGCAG CGTCGTGCGCAGGATGAGGCTGAGGAGCGTGCGGATAGGCGGCGTCGTTTTGCTAAGGGTCGATTGTCTATGCCGAGTCC TAGTAAGCGAAAGCGCGGTTTTTAG
Upstream 100 bases:
>100_bases TGGGGTGACACTTTACAGGAATATGTGGCGGTCAAGCAAAGCCGCGCGAGAGTCTGTAGTGTCGTGGCTGGAAATGTGTG GGAAGTAAAGGGGCCGTATC
Downstream 100 bases:
>100_bases CGTAGAATACTTGTTTTGCACTAGTAGCTACACCGTCTTTATCTCCCTAAAGGAGGAGCCTTGCCCCCCAAGGTCACTGA TACCCACACTAACTCTGCTG
Product: putative amino acid export carrier protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane Protein; Threonine Export Protein; Membrane Spanning Protein
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MGLFEKLRGWFAGSGRIATIDAVKAAPPPSPLAPIDLTDPAQVAGVMDLAARIGDILLSAGTANRDTKAQIHAVTAAYGL LYCHVDITLNTITVFTTIGSEKKIPVSVFRVVRSMNTDFSKLSEVDRLIRSIQAGATPPDVAEKILNELFQTRAKYRFRT AVFGWGFLGAAVSVLLGGSWLVALASFVVALVIMGGSVWLDRNSLPLFFQNIFGGFIATFPAALLYSAVTSHGVSISPSH IVAAGIVVMMANLTMVQSLQDGITGAPVTASARFFETLLITGAIVAGVGAGIQLAASLGITLPPLEQAALLGGSPSWVKV FAGAAASAAFAVGCYAELSAVVVSGLTAAAGSFVYYYLLIPAGIGPVVATAIAATCIGFGGGLLARRFLIPPLITAVAGI TPMLPGLSIYRGMYAALNEQTLLGFTNVAMALSICCSLAAGVVLGEWVARRIRRPQSFKPYTAFRRSQRYSFRQAQLAAQ RRAQDEAEERADRRRRFAKGRLSMPSPSKRKRGF
Sequences:
>Translated_514_residues MGLFEKLRGWFAGSGRIATIDAVKAAPPPSPLAPIDLTDPAQVAGVMDLAARIGDILLSAGTANRDTKAQIHAVTAAYGL LYCHVDITLNTITVFTTIGSEKKIPVSVFRVVRSMNTDFSKLSEVDRLIRSIQAGATPPDVAEKILNELFQTRAKYRFRT AVFGWGFLGAAVSVLLGGSWLVALASFVVALVIMGGSVWLDRNSLPLFFQNIFGGFIATFPAALLYSAVTSHGVSISPSH IVAAGIVVMMANLTMVQSLQDGITGAPVTASARFFETLLITGAIVAGVGAGIQLAASLGITLPPLEQAALLGGSPSWVKV FAGAAASAAFAVGCYAELSAVVVSGLTAAAGSFVYYYLLIPAGIGPVVATAIAATCIGFGGGLLARRFLIPPLITAVAGI TPMLPGLSIYRGMYAALNEQTLLGFTNVAMALSICCSLAAGVVLGEWVARRIRRPQSFKPYTAFRRSQRYSFRQAQLAAQ RRAQDEAEERADRRRRFAKGRLSMPSPSKRKRGF >Mature_513_residues GLFEKLRGWFAGSGRIATIDAVKAAPPPSPLAPIDLTDPAQVAGVMDLAARIGDILLSAGTANRDTKAQIHAVTAAYGLL YCHVDITLNTITVFTTIGSEKKIPVSVFRVVRSMNTDFSKLSEVDRLIRSIQAGATPPDVAEKILNELFQTRAKYRFRTA VFGWGFLGAAVSVLLGGSWLVALASFVVALVIMGGSVWLDRNSLPLFFQNIFGGFIATFPAALLYSAVTSHGVSISPSHI VAAGIVVMMANLTMVQSLQDGITGAPVTASARFFETLLITGAIVAGVGAGIQLAASLGITLPPLEQAALLGGSPSWVKVF AGAAASAAFAVGCYAELSAVVVSGLTAAAGSFVYYYLLIPAGIGPVVATAIAATCIGFGGGLLARRFLIPPLITAVAGIT PMLPGLSIYRGMYAALNEQTLLGFTNVAMALSICCSLAAGVVLGEWVARRIRRPQSFKPYTAFRRSQRYSFRQAQLAAQR RAQDEAEERADRRRRFAKGRLSMPSPSKRKRGF
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54236; Mature: 54105
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFEKLRGWFAGSGRIATIDAVKAAPPPSPLAPIDLTDPAQVAGVMDLAARIGDILLSA CCHHHHHHHHCCCCCCEEEEEHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC GTANRDTKAQIHAVTAAYGLLYCHVDITLNTITVFTTIGSEKKIPVSVFRVVRSMNTDFS CCCCCCCHHHHHHHHHHHEEEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHH KLSEVDRLIRSIQAGATPPDVAEKILNELFQTRAKYRFRTAVFGWGFLGAAVSVLLGGSW HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LVALASFVVALVIMGGSVWLDRNSLPLFFQNIFGGFIATFPAALLYSAVTSHGVSISPSH HHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH IVAAGIVVMMANLTMVQSLQDGITGAPVTASARFFETLLITGAIVAGVGAGIQLAASLGI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC TLPPLEQAALLGGSPSWVKVFAGAAASAAFAVGCYAELSAVVVSGLTAAAGSFVYYYLLI CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAGIGPVVATAIAATCIGFGGGLLARRFLIPPLITAVAGITPMLPGLSIYRGMYAALNEQ HCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC TLLGFTNVAMALSICCSLAAGVVLGEWVARRIRRPQSFKPYTAFRRSQRYSFRQAQLAAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH RRAQDEAEERADRRRRFAKGRLSMPSPSKRKRGF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GLFEKLRGWFAGSGRIATIDAVKAAPPPSPLAPIDLTDPAQVAGVMDLAARIGDILLSA CHHHHHHHHCCCCCCEEEEEHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC GTANRDTKAQIHAVTAAYGLLYCHVDITLNTITVFTTIGSEKKIPVSVFRVVRSMNTDFS CCCCCCCHHHHHHHHHHHEEEEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHH KLSEVDRLIRSIQAGATPPDVAEKILNELFQTRAKYRFRTAVFGWGFLGAAVSVLLGGSW HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LVALASFVVALVIMGGSVWLDRNSLPLFFQNIFGGFIATFPAALLYSAVTSHGVSISPSH HHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH IVAAGIVVMMANLTMVQSLQDGITGAPVTASARFFETLLITGAIVAGVGAGIQLAASLGI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC TLPPLEQAALLGGSPSWVKVFAGAAASAAFAVGCYAELSAVVVSGLTAAAGSFVYYYLLI CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAGIGPVVATAIAATCIGFGGGLLARRFLIPPLITAVAGITPMLPGLSIYRGMYAALNEQ HCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC TLLGFTNVAMALSICCSLAAGVVLGEWVARRIRRPQSFKPYTAFRRSQRYSFRQAQLAAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH RRAQDEAEERADRRRRFAKGRLSMPSPSKRKRGF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA