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The map label for this gene is insK [H]

Identifier: 38234519

GI number: 38234519

Start: 2006198

End: 2007007

Strand: Reverse

Name: insK [H]

Synonym: DIP1955

Alternate gene names: 38234519

Gene position: 2007007-2006198 (Counterclockwise)

Preceding gene: 38234520

Following gene: 38234517

Centisome position: 80.65

GC content: 51.36

Gene sequence:

>810_bases
TTGGACGCGGCAGGTCTTGCCCGATCAACATTTTTCTATCACCAGCAACGCCTAAACGTGCCGGATAAGCATATCGACCT
CAAGGAAGCGATCGTCGAGGTCTTCACGCGGACGAACCGTCGTTACGGCTACCGCAGGATTCATGCTCACCTTCGCCAAG
ACGGATGGAATGTCAACCATAAGCTGGTCTACAAGCTCATGGACGAGCTAGGCCTTAAATCCAAGGTCAGAGCAAAGAAG
AGGTACAACGCCTACCAAGGTACTGTCAGTCACATCGCGGAGAATGTGCTGGATCGATGCTTCACGCCCGATAAACCAAA
CACGGTGTGGACGAGTGATGTCACCGAGTTTCGCATTGCCGGCACCAAGGTCTACCTGTCACCAATCATGGATCTCTATG
ACCGCTCAATTGTGTCATATAGTGTGTCTACCTCACCAAATACAGCATTTACGTCAAGGTCATTGAAAGATGCCATCACA
AGCCAATCTCCCGGAAGCGGCTTACTGGTACACACAGATCAAGGGATCCAGTACCAACATTCCAGCTGGCGTGACCTCAT
CACAAGTATTGACGGCATCCAATCGATGTCCAGGAAAGGCAACTGCTACGACAATGCTGTAATGGAAAACTTCTTCGGAC
ACCTCAAGTCAGAGATGCACCACGGTGAATCATTCGACGGTCTCGAGCACTTCAGACAGGCCCTGGATGGGTACATCCAC
TGGTATAACCACGAACGCATTCAGAAACGGCTCAAGGGCCTGGCCCCGATGCAATACCGGAACCAGACCCTTGAACCACT
AACCGCATAG

Upstream 100 bases:

>100_bases
ACGCGTACTTAAAAAAATTGCGGGACTTGAGGAACCAGCGACGAAGCTAAGAGTCGAAGCGATCGTCATCCTCAAGTCTG
ACCATCGACTAGAAGACTTA

Downstream 100 bases:

>100_bases
AATTAAACCAGTCCAACTTTCGGGGGCTAGTTCAGTTTTTTCGTCTAAACCAGGGGGCTTTTTTTGTGTGTTGTGCTGGG
TGGTTGTGCCTTGAAATTCC

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MDAAGLARSTFFYHQQRLNVPDKHIDLKEAIVEVFTRTNRRYGYRRIHAHLRQDGWNVNHKLVYKLMDELGLKSKVRAKK
RYNAYQGTVSHIAENVLDRCFTPDKPNTVWTSDVTEFRIAGTKVYLSPIMDLYDRSIVSYSVSTSPNTAFTSRSLKDAIT
SQSPGSGLLVHTDQGIQYQHSSWRDLITSIDGIQSMSRKGNCYDNAVMENFFGHLKSEMHHGESFDGLEHFRQALDGYIH
WYNHERIQKRLKGLAPMQYRNQTLEPLTA

Sequences:

>Translated_269_residues
MDAAGLARSTFFYHQQRLNVPDKHIDLKEAIVEVFTRTNRRYGYRRIHAHLRQDGWNVNHKLVYKLMDELGLKSKVRAKK
RYNAYQGTVSHIAENVLDRCFTPDKPNTVWTSDVTEFRIAGTKVYLSPIMDLYDRSIVSYSVSTSPNTAFTSRSLKDAIT
SQSPGSGLLVHTDQGIQYQHSSWRDLITSIDGIQSMSRKGNCYDNAVMENFFGHLKSEMHHGESFDGLEHFRQALDGYIH
WYNHERIQKRLKGLAPMQYRNQTLEPLTA
>Mature_269_residues
MDAAGLARSTFFYHQQRLNVPDKHIDLKEAIVEVFTRTNRRYGYRRIHAHLRQDGWNVNHKLVYKLMDELGLKSKVRAKK
RYNAYQGTVSHIAENVLDRCFTPDKPNTVWTSDVTEFRIAGTKVYLSPIMDLYDRSIVSYSVSTSPNTAFTSRSLKDAIT
SQSPGSGLLVHTDQGIQYQHSSWRDLITSIDGIQSMSRKGNCYDNAVMENFFGHLKSEMHHGESFDGLEHFRQALDGYIH
WYNHERIQKRLKGLAPMQYRNQTLEPLTA

Specific function: Involved in the transposition of the insertion sequence IS150 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=191, Percent_Identity=27.2251308900524, Blast_Score=95, Evalue=6e-20,
Organism=Escherichia coli, GI1789981, Length=266, Percent_Identity=43.2330827067669, Blast_Score=237, Evalue=6e-64,
Organism=Escherichia coli, GI1788405, Length=266, Percent_Identity=31.5789473684211, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1787263, Length=266, Percent_Identity=31.5789473684211, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1786753, Length=266, Percent_Identity=31.5789473684211, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1786570, Length=266, Percent_Identity=31.5789473684211, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1786490, Length=266, Percent_Identity=31.5789473684211, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 31087; Mature: 31087

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAAGLARSTFFYHQQRLNVPDKHIDLKEAIVEVFTRTNRRYGYRRIHAHLRQDGWNVNH
CCCCHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCH
KLVYKLMDELGLKSKVRAKKRYNAYQGTVSHIAENVLDRCFTPDKPNTVWTSDVTEFRIA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHEECC
GTKVYLSPIMDLYDRSIVSYSVSTSPNTAFTSRSLKDAITSQSPGSGLLVHTDQGIQYQH
CHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCH
SSWRDLITSIDGIQSMSRKGNCYDNAVMENFFGHLKSEMHHGESFDGLEHFRQALDGYIH
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
WYNHERIQKRLKGLAPMQYRNQTLEPLTA
HHHHHHHHHHHHCCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MDAAGLARSTFFYHQQRLNVPDKHIDLKEAIVEVFTRTNRRYGYRRIHAHLRQDGWNVNH
CCCCHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCH
KLVYKLMDELGLKSKVRAKKRYNAYQGTVSHIAENVLDRCFTPDKPNTVWTSDVTEFRIA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHEECC
GTKVYLSPIMDLYDRSIVSYSVSTSPNTAFTSRSLKDAITSQSPGSGLLVHTDQGIQYQH
CHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCH
SSWRDLITSIDGIQSMSRKGNCYDNAVMENFFGHLKSEMHHGESFDGLEHFRQALDGYIH
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
WYNHERIQKRLKGLAPMQYRNQTLEPLTA
HHHHHHHHHHHHCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2841644; 2541046; 8041620; 9278503 [H]