| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234518
Identifier: 38234518
GI number: 38234518
Start: 2004306
End: 2005757
Strand: Direct
Name: 38234518
Synonym: DIP1953
Alternate gene names: NA
Gene position: 2004306-2005757 (Clockwise)
Preceding gene: 38234516
Following gene: 38234522
Centisome position: 80.54
GC content: 59.57
Gene sequence:
>1452_bases ATGCTCAAGCTTTTCGACGCCCCCCTCTTCCGCACCCTCAAACGAAGGCAAGAGGCGTCGACAGGCACCGCGACTATCGA CGTCGCCGCAGCCCCCGCTCTCGCCCCCATCGCCCCCGTCGATCTGACCGACCGTGGGCAGGTCACAGGTGTTTTAGAGA TCGCTGCGCGTATTGGTGAGATCCTCATCGTTGCGGGCACCACCAACTCAGATGCTTCCCGACAAGTGTCGGCGGTCACA GAATCTTTTGGACTCTGGAATTGCCACGTGGATATGACCTCAAACCGGATTCGTTTGTTTGCAAACGTTTCCGATGATCG TCGAAATCCTGTCGCCGTAGTTCGCATCATCACCCCAGCAGCACAGAACTTCCGCAAGCTCATCCTTGTCGACCGCCTCA TCCGCGACATCCACTCCGGCAAAGCGTCCCCCATTAACGCCGAAACTCGCCTCGATGCCATCGACCGCTCCAAAGACCCC ATGGGCCTGTTCGGCTTCGTCGCCTCCTTCGCCGTCATGTCTGGCGCCGTGGCGCTCCTTCTCGGCGGCGACATCCCCGT CTCCCTGATCTCCACCCTCGCCGGCGGCACCATCATGTGGATGAGCGCCAAACTTGGCGACCTCGGCCTGCCCATCTTTT TCCAAAACACCGCCGGCGGAATCTTCGTCGCAATCCTTGCTACCGTCGCCTACAAATGGGGCCTCTTTTTCGGACTGCAA CTTCGCCCCAGCATGATCATCGCCACCTCGATCATCGTGATGGTCGCAGGCCTCACACTCGTCCAAGCTATCCAAAATGG CGTCACCGCAGCCCCCATCTCAGGCACCGCCAGGCTTTTCGACGCCATCATCATCACCGCAGGAATCGTCGCCGGCATCG CTATTGGTGCATCCCTTGCCGCCACCCTCGGATACCCGCTCCCACCTGTAGAAACACTGCCAGTACCCAACTTGGCCAGC CAAACCGTCCGCGTGATCGGCAGCACCCTCGCCTCCGCAGCTTTCGCCCGCTCCTGCTATGCCGACTGGCCATCCGTTGT CATCTCCGGAGTAACAGCAATGATGGGCTCCTCGCTGTTTTACTTCGTGCTGGTCCCCACAGGGGTCAACGACATCACAG CAACCGCCACCACTGCGGTCATCATCGGACTCGTTGGCGGTCTGCTGGGCCGCCGCTATCAGATTCCCCCGCTGGTCATC TCCATCGCGGGCATTACCCCGCTATTGCCTGGTTCTGCGATCTACCGTGGTTTATTCGGTTTGCTCAATGAGCAGATCCT TGTCGGCTTTTCCAACCTCACCTATGCGTTTGCTGCTGCTACCGCGTTATCCGCCGGTGTGGTTTTTGGCGAATGGATCG CACGCAGGTTACGACGCCCACCGTCTCTGGCGCATTACCGCAAAGTGGCGGTACGGATCATGCGCGCACGACGTCGAAAC GTGTTTGACTAG
Upstream 100 bases:
>100_bases TCTTAAGTTGATACATCTATCATTCGCCCGATTTCCGCGGCGCCGCCACCTATCGACTCCAATCCCACACCGTCGCGGGA GTTGTGACAGAATCGACAGC
Downstream 100 bases:
>100_bases CAGCCCGCGGGGCGCAATTTCGTCTCCTCGATCTCAAGAACACGAAAACCCAAGAACGATACTTTTGGGAAATTTTCGCA TCCAGCGGTTTTCGATGTCG
Product: putative amino acid export carrier protein
Products: NA
Alternate protein names: Transmembrane Protein; Threonine Export Protein; Integral Membrane Protein
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MLKLFDAPLFRTLKRRQEASTGTATIDVAAAPALAPIAPVDLTDRGQVTGVLEIAARIGEILIVAGTTNSDASRQVSAVT ESFGLWNCHVDMTSNRIRLFANVSDDRRNPVAVVRIITPAAQNFRKLILVDRLIRDIHSGKASPINAETRLDAIDRSKDP MGLFGFVASFAVMSGAVALLLGGDIPVSLISTLAGGTIMWMSAKLGDLGLPIFFQNTAGGIFVAILATVAYKWGLFFGLQ LRPSMIIATSIIVMVAGLTLVQAIQNGVTAAPISGTARLFDAIIITAGIVAGIAIGASLAATLGYPLPPVETLPVPNLAS QTVRVIGSTLASAAFARSCYADWPSVVISGVTAMMGSSLFYFVLVPTGVNDITATATTAVIIGLVGGLLGRRYQIPPLVI SIAGITPLLPGSAIYRGLFGLLNEQILVGFSNLTYAFAAATALSAGVVFGEWIARRLRRPPSLAHYRKVAVRIMRARRRN VFD
Sequences:
>Translated_483_residues MLKLFDAPLFRTLKRRQEASTGTATIDVAAAPALAPIAPVDLTDRGQVTGVLEIAARIGEILIVAGTTNSDASRQVSAVT ESFGLWNCHVDMTSNRIRLFANVSDDRRNPVAVVRIITPAAQNFRKLILVDRLIRDIHSGKASPINAETRLDAIDRSKDP MGLFGFVASFAVMSGAVALLLGGDIPVSLISTLAGGTIMWMSAKLGDLGLPIFFQNTAGGIFVAILATVAYKWGLFFGLQ LRPSMIIATSIIVMVAGLTLVQAIQNGVTAAPISGTARLFDAIIITAGIVAGIAIGASLAATLGYPLPPVETLPVPNLAS QTVRVIGSTLASAAFARSCYADWPSVVISGVTAMMGSSLFYFVLVPTGVNDITATATTAVIIGLVGGLLGRRYQIPPLVI SIAGITPLLPGSAIYRGLFGLLNEQILVGFSNLTYAFAAATALSAGVVFGEWIARRLRRPPSLAHYRKVAVRIMRARRRN VFD >Mature_483_residues MLKLFDAPLFRTLKRRQEASTGTATIDVAAAPALAPIAPVDLTDRGQVTGVLEIAARIGEILIVAGTTNSDASRQVSAVT ESFGLWNCHVDMTSNRIRLFANVSDDRRNPVAVVRIITPAAQNFRKLILVDRLIRDIHSGKASPINAETRLDAIDRSKDP MGLFGFVASFAVMSGAVALLLGGDIPVSLISTLAGGTIMWMSAKLGDLGLPIFFQNTAGGIFVAILATVAYKWGLFFGLQ LRPSMIIATSIIVMVAGLTLVQAIQNGVTAAPISGTARLFDAIIITAGIVAGIAIGASLAATLGYPLPPVETLPVPNLAS QTVRVIGSTLASAAFARSCYADWPSVVISGVTAMMGSSLFYFVLVPTGVNDITATATTAVIIGLVGGLLGRRYQIPPLVI SIAGITPLLPGSAIYRGLFGLLNEQILVGFSNLTYAFAAATALSAGVVFGEWIARRLRRPPSLAHYRKVAVRIMRARRRN VFD
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50938; Mature: 50938
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLFDAPLFRTLKRRQEASTGTATIDVAAAPALAPIAPVDLTDRGQVTGVLEIAARIGE CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC ILIVAGTTNSDASRQVSAVTESFGLWNCHVDMTSNRIRLFANVSDDRRNPVAVVRIITPA EEEEEECCCCCHHHHHHHHHHHCCEEEEEEEECCCEEEEEEECCCCCCCCEEEEEEECCC AQNFRKLILVDRLIRDIHSGKASPINAETRLDAIDRSKDPMGLFGFVASFAVMSGAVALL HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEE LGGDIPVSLISTLAGGTIMWMSAKLGDLGLPIFFQNTAGGIFVAILATVAYKWGLFFGLQ ECCCCHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHEEEE LRPSMIIATSIIVMVAGLTLVQAIQNGVTAAPISGTARLFDAIIITAGIVAGIAIGASLA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ATLGYPLPPVETLPVPNLASQTVRVIGSTLASAAFARSCYADWPSVVISGVTAMMGSSLF HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEE YFVLVPTGVNDITATATTAVIIGLVGGLLGRRYQIPPLVISIAGITPLLPGSAIYRGLFG EEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCCCCCHHHHHHHHHH LLNEQILVGFSNLTYAFAAATALSAGVVFGEWIARRLRRPPSLAHYRKVAVRIMRARRRN HHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC VFD CCC >Mature Secondary Structure MLKLFDAPLFRTLKRRQEASTGTATIDVAAAPALAPIAPVDLTDRGQVTGVLEIAARIGE CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC ILIVAGTTNSDASRQVSAVTESFGLWNCHVDMTSNRIRLFANVSDDRRNPVAVVRIITPA EEEEEECCCCCHHHHHHHHHHHCCEEEEEEEECCCEEEEEEECCCCCCCCEEEEEEECCC AQNFRKLILVDRLIRDIHSGKASPINAETRLDAIDRSKDPMGLFGFVASFAVMSGAVALL HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEE LGGDIPVSLISTLAGGTIMWMSAKLGDLGLPIFFQNTAGGIFVAILATVAYKWGLFFGLQ ECCCCHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHEEEE LRPSMIIATSIIVMVAGLTLVQAIQNGVTAAPISGTARLFDAIIITAGIVAGIAIGASLA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ATLGYPLPPVETLPVPNLASQTVRVIGSTLASAAFARSCYADWPSVVISGVTAMMGSSLF HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEE YFVLVPTGVNDITATATTAVIIGLVGGLLGRRYQIPPLVISIAGITPLLPGSAIYRGLFG EEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCCCCCHHHHHHHHHH LLNEQILVGFSNLTYAFAAATALSAGVVFGEWIARRLRRPPSLAHYRKVAVRIMRARRRN HHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC VFD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA