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The map label for this gene is 38234482

Identifier: 38234482

GI number: 38234482

Start: 1967623

End: 1968300

Strand: Direct

Name: 38234482

Synonym: DIP1915

Alternate gene names: NA

Gene position: 1967623-1968300 (Clockwise)

Preceding gene: 38234480

Following gene: 38234484

Centisome position: 79.06

GC content: 57.67

Gene sequence:

>678_bases
ATGCCATCCAAACAAGTAGGCTGGTGGACTATGAGTGAACACACCAACGATGAAGTACAGCCCACCGCGCTCAGCGGTAA
CGACGCAGTCAATCGTGCCGCCGAGCAGTGGAAAGAATCCGCACACCGGAACATCCCAGGCCTAGGCGACCTACCTATTC
CTGATGACACCGCCAACCTTCGCGAGGGCCCTAACCTGCACGATGGCCTTCTCGCACTTCTCCCCCTCGTTGGTGTGTGG
CGAGGCACCGGGCACGCGGACACTGCCGAAGAGGGCCAGTACGCCTTTGGACAGCAGATTACCTTCGCACACGACGGCGA
AAACTACCTCACCTATGAGTCGCGTATCTGGAAGCTTGACGACGAAGGCAACTCCACCGACTTGGATTACCGCGAGTCCG
GCTTCTGGCGCATTAGCCTCAAAGACGAAATCGAGGTAGTACTTACGCACTCCACTGGTGTGGCAGAGATCTTCTACGGC
GAGCCTATGAACGAGCGCGCATGGCAAATCGAATCTGCTTCCACCATGGTTACGGCACAGGGCCCAGCAACCCTTGGTCC
AGGCAAGCGCCTCTACGGCTTGATGCCTAACAACAACTTGGGATGGGTAGATGAGCGCATGGTCGATGGCGAGATGCGCC
CACGGATGTCCGCAGAACTTTCCCGCGTGATCGGTTAA

Upstream 100 bases:

>100_bases
GCCGAAACATCTCGGCGGACTGCGTCGTCGAGTTCGGGTTGCTAACAATAAGAGCGCGCACGCCACCCACCTTATCGCCA
AACGCGAACATTTGTGGTGT

Downstream 100 bases:

>100_bases
TAACAACTACAGTGCTGTCAGTGCTGCCTCGATCAGCTCACGGATCTCGGATTCGTTGTCTGGTCGGGGCAGTTTTGTGT
CATTAATCCGCCGCACTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MPSKQVGWWTMSEHTNDEVQPTALSGNDAVNRAAEQWKESAHRNIPGLGDLPIPDDTANLREGPNLHDGLLALLPLVGVW
RGTGHADTAEEGQYAFGQQITFAHDGENYLTYESRIWKLDDEGNSTDLDYRESGFWRISLKDEIEVVLTHSTGVAEIFYG
EPMNERAWQIESASTMVTAQGPATLGPGKRLYGLMPNNNLGWVDERMVDGEMRPRMSAELSRVIG

Sequences:

>Translated_225_residues
MPSKQVGWWTMSEHTNDEVQPTALSGNDAVNRAAEQWKESAHRNIPGLGDLPIPDDTANLREGPNLHDGLLALLPLVGVW
RGTGHADTAEEGQYAFGQQITFAHDGENYLTYESRIWKLDDEGNSTDLDYRESGFWRISLKDEIEVVLTHSTGVAEIFYG
EPMNERAWQIESASTMVTAQGPATLGPGKRLYGLMPNNNLGWVDERMVDGEMRPRMSAELSRVIG
>Mature_224_residues
PSKQVGWWTMSEHTNDEVQPTALSGNDAVNRAAEQWKESAHRNIPGLGDLPIPDDTANLREGPNLHDGLLALLPLVGVWR
GTGHADTAEEGQYAFGQQITFAHDGENYLTYESRIWKLDDEGNSTDLDYRESGFWRISLKDEIEVVLTHSTGVAEIFYGE
PMNERAWQIESASTMVTAQGPATLGPGKRLYGLMPNNNLGWVDERMVDGEMRPRMSAELSRVIG

Specific function: May play a role in the intracellular transport of hydrophobic ligands (Potential)

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0678 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1915_CORDI (Q6NFH6)

Other databases:

- EMBL:   BX248359
- RefSeq:   NP_940249.1
- ProteinModelPortal:   Q6NFH6
- SMR:   Q6NFH6
- GeneID:   2648963
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP1915
- NMPDR:   fig|257309.1.peg.1840
- HOGENOM:   HBG445899
- OMA:   YGLMPNN
- ProtClustDB:   CLSK2484914
- BioCyc:   CDIP257309:DIP1915-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01297
- InterPro:   IPR011038
- InterPro:   IPR014878
- InterPro:   IPR022939

Pfam domain/function: PF08768 DUF1794; SSF50814 Calycin

EC number: NA

Molecular weight: Translated: 25027; Mature: 24896

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: BINDING 190-190

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSKQVGWWTMSEHTNDEVQPTALSGNDAVNRAAEQWKESAHRNIPGLGDLPIPDDTANL
CCCCCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
REGPNLHDGLLALLPLVGVWRGTGHADTAEEGQYAFGQQITFAHDGENYLTYESRIWKLD
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCEEEEEECCCCEEEECCEEEEEC
DEGNSTDLDYRESGFWRISLKDEIEVVLTHSTGVAEIFYGEPMNERAWQIESASTMVTAQ
CCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCEEEEEC
GPATLGPGKRLYGLMPNNNLGWVDERMVDGEMRPRMSAELSRVIG
CCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
PSKQVGWWTMSEHTNDEVQPTALSGNDAVNRAAEQWKESAHRNIPGLGDLPIPDDTANL
CCCCCCEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
REGPNLHDGLLALLPLVGVWRGTGHADTAEEGQYAFGQQITFAHDGENYLTYESRIWKLD
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCEEEEEECCCCEEEECCEEEEEC
DEGNSTDLDYRESGFWRISLKDEIEVVLTHSTGVAEIFYGEPMNERAWQIESASTMVTAQ
CCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCEEEEEC
GPATLGPGKRLYGLMPNNNLGWVDERMVDGEMRPRMSAELSRVIG
CCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14602910