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The map label for this gene is 38234467

Identifier: 38234467

GI number: 38234467

Start: 1949524

End: 1949853

Strand: Direct

Name: 38234467

Synonym: DIP1897

Alternate gene names: NA

Gene position: 1949524-1949853 (Clockwise)

Preceding gene: 38234466

Following gene: 38234468

Centisome position: 78.34

GC content: 47.88

Gene sequence:

>330_bases
TTGTTCATCTGCCAGACGTTAAACACGCATCGCGAAGGCGGTTTTATCACGTCGCGTGGTTACCGCCAATCCAAAGCCCG
TGGCTTAAGTGTTCGCAGTCTTCGTGACGCTGCCCTTGTAGAGCATATTCGCGACGTTCACGCTGAAAATTACGGTGTCT
ATGGGGTGCGGAAGATATGGGAAGCCGAGTTTTTGGAAGCATCACCCCAGTCGAGAAATAATAGAAATCAAGGCAAATGC
CTAGGAACAAAACTCGGGGCACTTCAAACATCTAGGAGCAATCACTTAATAAGCTTAACTGGCCGATCAACTTTGAAGAA
AGCCAGCTAA

Upstream 100 bases:

>100_bases
TTGTTGAAAGCCGCCTCGGCTTTTTTCGCATCCGAACCAGGCCCAAAACGTTAAGAAATGATTCCGATTCATTGATGAGC
ATTGGAATCGTTTCTCTGCC

Downstream 100 bases:

>100_bases
GCACTACTGGCGCTAGCCATAATGCTTCTCTGTGCGGATCATCCCTCCCCGCAAGGCACCACAATATTTAAAAATATGTC
ACTAGTTATTGCATATACGT

Product: putative transposase (partial)

Products: NA

Alternate protein names: Transposase; Transposase Subunit B; Transposase For Insertion Sequence; Transposase For IS; Integrase Catalytic Region; Integrase Catalytic Domain-Containing Protein

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MFICQTLNTHREGGFITSRGYRQSKARGLSVRSLRDAALVEHIRDVHAENYGVYGVRKIWEAEFLEASPQSRNNRNQGKC
LGTKLGALQTSRSNHLISLTGRSTLKKAS

Sequences:

>Translated_109_residues
MFICQTLNTHREGGFITSRGYRQSKARGLSVRSLRDAALVEHIRDVHAENYGVYGVRKIWEAEFLEASPQSRNNRNQGKC
LGTKLGALQTSRSNHLISLTGRSTLKKAS
>Mature_109_residues
MFICQTLNTHREGGFITSRGYRQSKARGLSVRSLRDAALVEHIRDVHAENYGVYGVRKIWEAEFLEASPQSRNNRNQGKC
LGTKLGALQTSRSNHLISLTGRSTLKKAS

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12203; Mature: 12203

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFICQTLNTHREGGFITSRGYRQSKARGLSVRSLRDAALVEHIRDVHAENYGVYGVRKIW
CEEECCCCCCCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EAEFLEASPQSRNNRNQGKCLGTKLGALQTSRSNHLISLTGRSTLKKAS
HHHHHCCCCCCCCCCCCCCCCHHHHCCEECCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MFICQTLNTHREGGFITSRGYRQSKARGLSVRSLRDAALVEHIRDVHAENYGVYGVRKIW
CEEECCCCCCCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EAEFLEASPQSRNNRNQGKCLGTKLGALQTSRSNHLISLTGRSTLKKAS
HHHHHCCCCCCCCCCCCCCCCHHHHCCEECCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA