Click here to switch to the map view.

The map label for this gene is 38234464

Identifier: 38234464

GI number: 38234464

Start: 1944430

End: 1947027

Strand: Reverse

Name: 38234464

Synonym: DIP1894

Alternate gene names: NA

Gene position: 1947027-1944430 (Counterclockwise)

Preceding gene: 38234465

Following gene: 38234463

Centisome position: 78.24

GC content: 52.39

Gene sequence:

>2598_bases
ATGGCAACCCGACTCAACATCAGTTTTGACTCCGATTTGCTCGAGTCGATCAGTTCCGAGTTTGATTTGCGTGCCCCGAA
CAAGGAAGCGCTGCGTCAGCTGGTCTTTACACTTGACGGGGATTATGAGCCGTCGATAATGCAAGTGCTTAATCTAGCAA
CGGGCGTGGGCAAGACATATTTGATGGCTGCTTTCGTGGAGTACCTTCGCCGCCAAGGCGTTGGCAACGTTGTGATAGTG
ACTCCGGGTAAAACGGTTCAGGCCAAAACAGTCCAGAACTTTACGCCTGGCTCGCCTCGCTACATCACCGGTTCTGTTGT
GCCGCCGGAGGTTGTTACCCCACAGGATTATTCGGCATGGGTAGCTAGACAAAATGGTGCTGCGCAGCTGTCTTTTGGTC
ATGAAGTGCCCATATTGGCGTTTATCTTCAACATTCAGCAGCTCATCGCGCCGAAGTCCACTGAAGGTGACACTCATGGC
AATACGCAAGACGCAATGCGTCGTAAGCCGCGGCGTTTCGACGAAAACGCAGGTGTGCTCTTCGATTATCTCAAGGGGCT
CGATGATCTTGTTGTTATTGCTGATGAGTCACACCTCTACGGTTCCAGTGCAATCGCGTTTAACGCAGCACTCAAGGAGC
TAGATCCGGCGGCAACGATTGGGCTAACCGCTTCGGTCGATAAGAAGTCCGATCATGTCATTTACCACTACCCGCTCTTC
CGTGCCATTCAGGATAAGTATGTTAAAGCCCCAGTGCTAGCTTTCCGTAAGACGGGTTATGGCACCGATGAAGCATCTGA
GGAACAGCAGTTACGGGATGCTTTACAGTTGCGGTCAATCAAACAGGTCTATTATGACTCCTTTGCTGCCAGCGAGAACC
GAAAGCATGTGAACGCGGTAGTTTTTGTGGTCTGCTCAGATGTGGACCATGCCACCCAAGTGACTGAGTTACTTCGTAGC
CCGGAATATTTGGGGAACGACGATGCTGTGTTACAGGTTGACTCGAAGCATGAGGATGAACTTACTCAACGTCGGCTGAA
TGAGCTTGATCGTCCGCATTCCCCAGTGCTTGCTGTAGTGAGTGTGAACAAACTTAAAGAGGGGTGGGACGTCAGAAACA
TTGCTGTCGTGGTGACATTGAGAGCGATGGCTTCAGAAGTGCTCACCCAACAGACGATGGGGCGAGGGTTGCGTTTGCCG
TTCGGTCACTACACAGGTGTGTGGCAGATTGACCAGCTCGATATCATTGCCCACCAGTCCTTTACTGAGCTGCTTAACGC
GGAGAACGTTCTCCACCAGTTTGGTTTGGAAGAAGCTGTCGCCGATCTTGACAAGGCACAAGTCGAAGCGGCGATTCTCA
AGGCCGCTGAAACTGCTACCTCTCCAAGATTGGGTACCTCTTTGACAGACACCGGTGTCATACAGCCAGGCGACGTGGCT
GCTCACGAAGCCGGTGTATGGCTTATCGGAGATAGCTCCAACAGTGATGATTTACAGGCAGGAATAGTGCCCGTCGGCGG
AGAAAACTCTACGAGAACGCCAAGTGTGGGAGTACGTGAAATAACCGACCCTGCTCCGGAAGGCGGTACGGGGTGGGAGT
TAGTCTCGATTGAACGAAATCCGGCTTTCGCAGATGTCACGTATCAGTTCCCGGTGACGACGATGACCGTGCAGCAGCCA
TCTATTGACCTCTCAGAGATCGGTGACGACACTATTGAGCAGGCTGCCCGCCGAGTAACCTCAGCTGGCGATGTGTTGCT
TCGCAAAGAGATTATTGCCGTGTTAGGAAAGAAACTACGCGCGGAGGATCGTGAGAGTGCTGAGGTAGATTCCGTCCATG
TCGACGAAGATGATGCAAAGAACGCACTAGTTAAACTGGTGCTGAATATGTCGTTGGTGCCTAAAACGGAGCAGACGGCT
CGTTATGTAGCCGCATTCCTCGTACCGAAGTTTATGCAATCGGTGATGTTTAGTGGTTGGACGGTGAAGTCTTTGGATTC
GGCGCGCACTGAGCTCCTCAAACTCATCCAAAATTATACCGTTGAGACGTTGCGTTCCACCCGCGAGGTACCGAGCATTC
ACCCGAAGTCGATGCCTAGTAATGGTTATACGTTGCCGCTGGGGCAGAAGGTGCATGATCAGATTGAGACACGTGAGCAG
TTCGTACGTAGCCAGGTGTATGGGGGCTGGTTCAAGTCGTTGTTCGCTGAGGAATCTTTTGACTCTTTCACCGGCGAGTA
CCAGCTAGCGCGCTTACTGAACACTTCGCCGGGGATTGTATGGTGGCATCGGCTGCATCCACAAGACCAAGCGTTTGTGT
TTTACAATGCTAAGGATCGCTACTTTCCAGACTTTGTCGCTATGGATGTTAACGGAGTGCACTGGATCATCGAAGGGAAA
TCGGAGCGCGGCCGTGACGACGCTCAGGTACAGGCCAAGCGCAAAGCAGCCGAAGCGCTGGTGCGCCGCCTAGTAGCTGA
GGATGCCTACGCCGATCAGCTTTGGGGCTATTTGATCGCCTACGAGCAAGACATAGCCCGTGCTGACTCTTGGGAAGACT
TGAAAGCCTTCGCTAGCCCAGTCAACAATGCCCTATAG

Upstream 100 bases:

>100_bases
TGGACGGGGTACGCCAGCATCTTCGCAAAGCCGTGAAGGGCTCGCGGGTGGTCGCTCTGCCTGATGATATTTTTCGCTAC
AGCGAAGGCGGTAACAAGTA

Downstream 100 bases:

>100_bases
CGGCATAACCGCCACACCGAAGCGCTCCTTGACTAGCTTATAAAAAGCTTGGTTACCTCGCGTTTTGCGTATTTTAGGAA
TTCAAGTATAGTTCTTCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Type III Restriction Res Subunit; Type III Restriction- Helicase Subunit; DNA Restriction- System Restriction; Type III Restriction; PstII Restriction- Res Subunit; Type III Restriction Res Subunit Family; Type III Restriction-; Type III Restriction- System R Subunit

Number of amino acids: Translated: 865; Mature: 864

Protein sequence:

>865_residues
MATRLNISFDSDLLESISSEFDLRAPNKEALRQLVFTLDGDYEPSIMQVLNLATGVGKTYLMAAFVEYLRRQGVGNVVIV
TPGKTVQAKTVQNFTPGSPRYITGSVVPPEVVTPQDYSAWVARQNGAAQLSFGHEVPILAFIFNIQQLIAPKSTEGDTHG
NTQDAMRRKPRRFDENAGVLFDYLKGLDDLVVIADESHLYGSSAIAFNAALKELDPAATIGLTASVDKKSDHVIYHYPLF
RAIQDKYVKAPVLAFRKTGYGTDEASEEQQLRDALQLRSIKQVYYDSFAASENRKHVNAVVFVVCSDVDHATQVTELLRS
PEYLGNDDAVLQVDSKHEDELTQRRLNELDRPHSPVLAVVSVNKLKEGWDVRNIAVVVTLRAMASEVLTQQTMGRGLRLP
FGHYTGVWQIDQLDIIAHQSFTELLNAENVLHQFGLEEAVADLDKAQVEAAILKAAETATSPRLGTSLTDTGVIQPGDVA
AHEAGVWLIGDSSNSDDLQAGIVPVGGENSTRTPSVGVREITDPAPEGGTGWELVSIERNPAFADVTYQFPVTTMTVQQP
SIDLSEIGDDTIEQAARRVTSAGDVLLRKEIIAVLGKKLRAEDRESAEVDSVHVDEDDAKNALVKLVLNMSLVPKTEQTA
RYVAAFLVPKFMQSVMFSGWTVKSLDSARTELLKLIQNYTVETLRSTREVPSIHPKSMPSNGYTLPLGQKVHDQIETREQ
FVRSQVYGGWFKSLFAEESFDSFTGEYQLARLLNTSPGIVWWHRLHPQDQAFVFYNAKDRYFPDFVAMDVNGVHWIIEGK
SERGRDDAQVQAKRKAAEALVRRLVAEDAYADQLWGYLIAYEQDIARADSWEDLKAFASPVNNAL

Sequences:

>Translated_865_residues
MATRLNISFDSDLLESISSEFDLRAPNKEALRQLVFTLDGDYEPSIMQVLNLATGVGKTYLMAAFVEYLRRQGVGNVVIV
TPGKTVQAKTVQNFTPGSPRYITGSVVPPEVVTPQDYSAWVARQNGAAQLSFGHEVPILAFIFNIQQLIAPKSTEGDTHG
NTQDAMRRKPRRFDENAGVLFDYLKGLDDLVVIADESHLYGSSAIAFNAALKELDPAATIGLTASVDKKSDHVIYHYPLF
RAIQDKYVKAPVLAFRKTGYGTDEASEEQQLRDALQLRSIKQVYYDSFAASENRKHVNAVVFVVCSDVDHATQVTELLRS
PEYLGNDDAVLQVDSKHEDELTQRRLNELDRPHSPVLAVVSVNKLKEGWDVRNIAVVVTLRAMASEVLTQQTMGRGLRLP
FGHYTGVWQIDQLDIIAHQSFTELLNAENVLHQFGLEEAVADLDKAQVEAAILKAAETATSPRLGTSLTDTGVIQPGDVA
AHEAGVWLIGDSSNSDDLQAGIVPVGGENSTRTPSVGVREITDPAPEGGTGWELVSIERNPAFADVTYQFPVTTMTVQQP
SIDLSEIGDDTIEQAARRVTSAGDVLLRKEIIAVLGKKLRAEDRESAEVDSVHVDEDDAKNALVKLVLNMSLVPKTEQTA
RYVAAFLVPKFMQSVMFSGWTVKSLDSARTELLKLIQNYTVETLRSTREVPSIHPKSMPSNGYTLPLGQKVHDQIETREQ
FVRSQVYGGWFKSLFAEESFDSFTGEYQLARLLNTSPGIVWWHRLHPQDQAFVFYNAKDRYFPDFVAMDVNGVHWIIEGK
SERGRDDAQVQAKRKAAEALVRRLVAEDAYADQLWGYLIAYEQDIARADSWEDLKAFASPVNNAL
>Mature_864_residues
ATRLNISFDSDLLESISSEFDLRAPNKEALRQLVFTLDGDYEPSIMQVLNLATGVGKTYLMAAFVEYLRRQGVGNVVIVT
PGKTVQAKTVQNFTPGSPRYITGSVVPPEVVTPQDYSAWVARQNGAAQLSFGHEVPILAFIFNIQQLIAPKSTEGDTHGN
TQDAMRRKPRRFDENAGVLFDYLKGLDDLVVIADESHLYGSSAIAFNAALKELDPAATIGLTASVDKKSDHVIYHYPLFR
AIQDKYVKAPVLAFRKTGYGTDEASEEQQLRDALQLRSIKQVYYDSFAASENRKHVNAVVFVVCSDVDHATQVTELLRSP
EYLGNDDAVLQVDSKHEDELTQRRLNELDRPHSPVLAVVSVNKLKEGWDVRNIAVVVTLRAMASEVLTQQTMGRGLRLPF
GHYTGVWQIDQLDIIAHQSFTELLNAENVLHQFGLEEAVADLDKAQVEAAILKAAETATSPRLGTSLTDTGVIQPGDVAA
HEAGVWLIGDSSNSDDLQAGIVPVGGENSTRTPSVGVREITDPAPEGGTGWELVSIERNPAFADVTYQFPVTTMTVQQPS
IDLSEIGDDTIEQAARRVTSAGDVLLRKEIIAVLGKKLRAEDRESAEVDSVHVDEDDAKNALVKLVLNMSLVPKTEQTAR
YVAAFLVPKFMQSVMFSGWTVKSLDSARTELLKLIQNYTVETLRSTREVPSIHPKSMPSNGYTLPLGQKVHDQIETREQF
VRSQVYGGWFKSLFAEESFDSFTGEYQLARLLNTSPGIVWWHRLHPQDQAFVFYNAKDRYFPDFVAMDVNGVHWIIEGKS
ERGRDDAQVQAKRKAAEALVRRLVAEDAYADQLWGYLIAYEQDIARADSWEDLKAFASPVNNAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95903; Mature: 95772

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRLNISFDSDLLESISSEFDLRAPNKEALRQLVFTLDGDYEPSIMQVLNLATGVGKTY
CCEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHH
LMAAFVEYLRRQGVGNVVIVTPGKTVQAKTVQNFTPGSPRYITGSVVPPEVVTPQDYSAW
HHHHHHHHHHHCCCCCEEEECCCCCEEEHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHH
VARQNGAAQLSFGHEVPILAFIFNIQQLIAPKSTEGDTHGNTQDAMRRKPRRFDENAGVL
HCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHH
FDYLKGLDDLVVIADESHLYGSSAIAFNAALKELDPAATIGLTASVDKKSDHVIYHYPLF
HHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECHHH
RAIQDKYVKAPVLAFRKTGYGTDEASEEQQLRDALQLRSIKQVYYDSFAASENRKHVNAV
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
VFVVCSDVDHATQVTELLRSPEYLGNDDAVLQVDSKHEDELTQRRLNELDRPHSPVLAVV
EEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEE
SVNKLKEGWDVRNIAVVVTLRAMASEVLTQQTMGRGLRLPFGHYTGVWQIDQLDIIAHQS
EHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHH
FTELLNAENVLHQFGLEEAVADLDKAQVEAAILKAAETATSPRLGTSLTDTGVIQPGDVA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
AHEAGVWLIGDSSNSDDLQAGIVPVGGENSTRTPSVGVREITDPAPEGGTGWELVSIERN
HHHCCEEEEECCCCCCCCEECEEEECCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEECC
PAFADVTYQFPVTTMTVQQPSIDLSEIGDDTIEQAARRVTSAGDVLLRKEIIAVLGKKLR
CCEEEEEEECCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AEDRESAEVDSVHVDEDDAKNALVKLVLNMSLVPKTEQTARYVAAFLVPKFMQSVMFSGW
CCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
TVKSLDSARTELLKLIQNYTVETLRSTREVPSIHPKSMPSNGYTLPLGQKVHDQIETREQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHH
FVRSQVYGGWFKSLFAEESFDSFTGEYQLARLLNTSPGIVWWHRLHPQDQAFVFYNAKDR
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCC
YFPDFVAMDVNGVHWIIEGKSERGRDDAQVQAKRKAAEALVRRLVAEDAYADQLWGYLIA
CCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEQDIARADSWEDLKAFASPVNNAL
HHHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATRLNISFDSDLLESISSEFDLRAPNKEALRQLVFTLDGDYEPSIMQVLNLATGVGKTY
CEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHH
LMAAFVEYLRRQGVGNVVIVTPGKTVQAKTVQNFTPGSPRYITGSVVPPEVVTPQDYSAW
HHHHHHHHHHHCCCCCEEEECCCCCEEEHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHH
VARQNGAAQLSFGHEVPILAFIFNIQQLIAPKSTEGDTHGNTQDAMRRKPRRFDENAGVL
HCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHH
FDYLKGLDDLVVIADESHLYGSSAIAFNAALKELDPAATIGLTASVDKKSDHVIYHYPLF
HHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECHHH
RAIQDKYVKAPVLAFRKTGYGTDEASEEQQLRDALQLRSIKQVYYDSFAASENRKHVNAV
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
VFVVCSDVDHATQVTELLRSPEYLGNDDAVLQVDSKHEDELTQRRLNELDRPHSPVLAVV
EEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEE
SVNKLKEGWDVRNIAVVVTLRAMASEVLTQQTMGRGLRLPFGHYTGVWQIDQLDIIAHQS
EHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHH
FTELLNAENVLHQFGLEEAVADLDKAQVEAAILKAAETATSPRLGTSLTDTGVIQPGDVA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
AHEAGVWLIGDSSNSDDLQAGIVPVGGENSTRTPSVGVREITDPAPEGGTGWELVSIERN
HHHCCEEEEECCCCCCCCEECEEEECCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEECC
PAFADVTYQFPVTTMTVQQPSIDLSEIGDDTIEQAARRVTSAGDVLLRKEIIAVLGKKLR
CCEEEEEEECCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AEDRESAEVDSVHVDEDDAKNALVKLVLNMSLVPKTEQTARYVAAFLVPKFMQSVMFSGW
CCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
TVKSLDSARTELLKLIQNYTVETLRSTREVPSIHPKSMPSNGYTLPLGQKVHDQIETREQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHH
FVRSQVYGGWFKSLFAEESFDSFTGEYQLARLLNTSPGIVWWHRLHPQDQAFVFYNAKDR
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCC
YFPDFVAMDVNGVHWIIEGKSERGRDDAQVQAKRKAAEALVRRLVAEDAYADQLWGYLIA
CCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEQDIARADSWEDLKAFASPVNNAL
HHHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA