| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234448
Identifier: 38234448
GI number: 38234448
Start: 1921639
End: 1922748
Strand: Reverse
Name: 38234448
Synonym: DIP1878
Alternate gene names: NA
Gene position: 1922748-1921639 (Counterclockwise)
Preceding gene: 38234450
Following gene: 38234447
Centisome position: 77.26
GC content: 51.62
Gene sequence:
>1110_bases GTGTCAGTGAGTTCTTTACGTAGGCCTTCCTCAAGGATCTTCCTATTGGTTGGTGGCATCGCCAATCTGCTTATCGCGCT CAATGCAGCCCTCCTTAAACTGGGGGTGTGGGCGCCGGTGGATCAGGCTGATGGAAACACTCACGGCTATGTAATGGTCA TCGGCTTTTTAGGTACTCTTATCTCCCTCGAGCGTGCTCAAGCTCTTGCACACAGAGCCCCACGGCATCGATGGGCGTAT CTCGCCCCACTATTGTTGGGGATAGGGGGAGTGGTTTTAGGTGTCGGTGGAACGGGAACGTTGGCCGCTGTTATCGGCCA CTTCTTTATGATCGAAGGCGCGCTTATATTTTGCGCCATTCACTGTGTGTTATACCTCCGCACACACGGCATGATCGCCG CAGCGCAGATTCTTTCTGCACTGAGCCTTTTTATTGCGACTGTTTTGGTTTTGTTGTGGGACATTAGCCAACTGTTTTTT ATTCTTGCGGCGTTTGTAATAGTGACTATTGCCGCGGAACGTGCGGAACTCGCTCAACTACGTATGGGCCCCCGCGCAGC ACCTACGCTTTTAGTAACTTCATGTGCTCTGGTTCTCACCTCGGGGATAGCGCTGATATGGCAGTCGGTAGGAAGTAGAT TTTTCGGGGCTGTTCTGCTCATTATTGCCTTGTGGCTAATTAGGGATGATGTTCCTCGGGTATTTATTCGAAGAACTGGG CTGCAGCGGTTTACTGCAGGGGCCCTTCTTGCAGGGTACGTTTGGCTTATCATCGGTGCGCTGGCTGTAGTTATTACTGC TGCTCCGGCGGGAACGATCTTTTATGACCTGGTTATCCATGCAATCTTTGTGGGGTTTGCTATGTCCATGATCATGGCCC ACGCGCCGATTATTTTTCCCTCGGTGCTGGGGCTTCGTGTCCCGTTTGTTGCTGCCATGTGGATTCCTCTTGTGGTCCTC CACATGGGTCTTAGCATCCGAGTTGTTTCCCAAATTTTTATAGGGCAAGGGCATGTTTGGATCCTCGGTGCGGTGACGAG TGCGCTTGCGATCCTTGGGTTCTTAGCCACGACGATAACTGTCATAATTCGCACTGCTATGAGGCGATAA
Upstream 100 bases:
>100_bases CTCACTCATGAATCACTCCTTTTTCTTTTTTACATATCATATGTAAAATATGGCTGATCGCCAATGTTGCCACATTTACC ACCGTGCTGGAAGGGGGCTT
Downstream 100 bases:
>100_bases CTTATGGGCAACAATAAAAATTATCGAAGCCGCGGTAGAGTTCGTCGTCTCCGCGATTTCCTTGCCTTAGCGTGGCTTCT CGCAGCTCTAGCTGTAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSVSSLRRPSSRIFLLVGGIANLLIALNAALLKLGVWAPVDQADGNTHGYVMVIGFLGTLISLERAQALAHRAPRHRWAY LAPLLLGIGGVVLGVGGTGTLAAVIGHFFMIEGALIFCAIHCVLYLRTHGMIAAAQILSALSLFIATVLVLLWDISQLFF ILAAFVIVTIAAERAELAQLRMGPRAAPTLLVTSCALVLTSGIALIWQSVGSRFFGAVLLIIALWLIRDDVPRVFIRRTG LQRFTAGALLAGYVWLIIGALAVVITAAPAGTIFYDLVIHAIFVGFAMSMIMAHAPIIFPSVLGLRVPFVAAMWIPLVVL HMGLSIRVVSQIFIGQGHVWILGAVTSALAILGFLATTITVIIRTAMRR
Sequences:
>Translated_369_residues MSVSSLRRPSSRIFLLVGGIANLLIALNAALLKLGVWAPVDQADGNTHGYVMVIGFLGTLISLERAQALAHRAPRHRWAY LAPLLLGIGGVVLGVGGTGTLAAVIGHFFMIEGALIFCAIHCVLYLRTHGMIAAAQILSALSLFIATVLVLLWDISQLFF ILAAFVIVTIAAERAELAQLRMGPRAAPTLLVTSCALVLTSGIALIWQSVGSRFFGAVLLIIALWLIRDDVPRVFIRRTG LQRFTAGALLAGYVWLIIGALAVVITAAPAGTIFYDLVIHAIFVGFAMSMIMAHAPIIFPSVLGLRVPFVAAMWIPLVVL HMGLSIRVVSQIFIGQGHVWILGAVTSALAILGFLATTITVIIRTAMRR >Mature_368_residues SVSSLRRPSSRIFLLVGGIANLLIALNAALLKLGVWAPVDQADGNTHGYVMVIGFLGTLISLERAQALAHRAPRHRWAYL APLLLGIGGVVLGVGGTGTLAAVIGHFFMIEGALIFCAIHCVLYLRTHGMIAAAQILSALSLFIATVLVLLWDISQLFFI LAAFVIVTIAAERAELAQLRMGPRAAPTLLVTSCALVLTSGIALIWQSVGSRFFGAVLLIIALWLIRDDVPRVFIRRTGL QRFTAGALLAGYVWLIIGALAVVITAAPAGTIFYDLVIHAIFVGFAMSMIMAHAPIIFPSVLGLRVPFVAAMWIPLVVLH MGLSIRVVSQIFIGQGHVWILGAVTSALAILGFLATTITVIIRTAMRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39436; Mature: 39305
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSSLRRPSSRIFLLVGGIANLLIALNAALLKLGVWAPVDQADGNTHGYVMVIGFLGTL CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH ISLERAQALAHRAPRHRWAYLAPLLLGIGGVVLGVGGTGTLAAVIGHFFMIEGALIFCAI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHH HCVLYLRTHGMIAAAQILSALSLFIATVLVLLWDISQLFFILAAFVIVTIAAERAELAQL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMGPRAAPTLLVTSCALVLTSGIALIWQSVGSRFFGAVLLIIALWLIRDDVPRVFIRRTG HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LQRFTAGALLAGYVWLIIGALAVVITAAPAGTIFYDLVIHAIFVGFAMSMIMAHAPIIFP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH SVLGLRVPFVAAMWIPLVVLHMGLSIRVVSQIFIGQGHVWILGAVTSALAILGFLATTIT HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH VIIRTAMRR HHHHHHHCC >Mature Secondary Structure SVSSLRRPSSRIFLLVGGIANLLIALNAALLKLGVWAPVDQADGNTHGYVMVIGFLGTL CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH ISLERAQALAHRAPRHRWAYLAPLLLGIGGVVLGVGGTGTLAAVIGHFFMIEGALIFCAI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHH HCVLYLRTHGMIAAAQILSALSLFIATVLVLLWDISQLFFILAAFVIVTIAAERAELAQL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMGPRAAPTLLVTSCALVLTSGIALIWQSVGSRFFGAVLLIIALWLIRDDVPRVFIRRTG HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LQRFTAGALLAGYVWLIIGALAVVITAAPAGTIFYDLVIHAIFVGFAMSMIMAHAPIIFP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH SVLGLRVPFVAAMWIPLVVLHMGLSIRVVSQIFIGQGHVWILGAVTSALAILGFLATTIT HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH VIIRTAMRR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA