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The map label for this gene is crtB [H]

Identifier: 38234440

GI number: 38234440

Start: 1914603

End: 1915475

Strand: Direct

Name: crtB [H]

Synonym: DIP1870

Alternate gene names: 38234440

Gene position: 1914603-1915475 (Clockwise)

Preceding gene: 38234436

Following gene: 38234441

Centisome position: 76.93

GC content: 59.79

Gene sequence:

>873_bases
GTGGACCACCGGCAAACATTCCTCTCTCGCTACGACACCGCGGCATGCAAAGCAGCACACGAAATCATCAGCTGCTACTC
CACCAGCTTCGGCCTAGCCACAAAACTCCTGCGTGGTCGCATCCGCACAGACATCAGCAACCTCTACGCCATGGTGCGCA
TCGCCGACGAAATCGTCGACGGCACAGCACAGATGGCAGGCCTTGAGCCCAACGCCGTCTCCCAGCTCCTCGACGATTAC
GAGGCAGCCGTACTCGCCGCCCCCACGCAGCGATTCCACGCCGACCCCATCCTCCACGCCTGGGCGCTAAGCGCTCGGCG
CTGCAAATTTAAAACTGAACACGTGCAGGCATTTTTCACTTCCATGCGCAACGACCTGCACAAACATAACTACGAGGCCG
CCGAATTTAACGAATACGTCTACGGTTCCGCCGAGGTCATAGGCCTTATGTGCTTGGACGCCTTCCTCGTGGAACAACAC
CCCCGCCCGCATGAGCGCACCATGATGGAACACGGCGCGCGCAGTCTCGGCTCCGCCTTTCAAAAAATCAACTTCCTGCG
CGACCTTGAAGAAGACACCCACGTCCTCGGACGCAACTACTTCCCACAACTAACCGGCGAGCTTACCGACGCCACCAAGG
CCCTCCTCGTCGCCGACATCCGCACCGACCTCGCCGCCGCATACCGCTGCATCCCACTCCTGCCTTTCGACGCCCGCGTC
GGCGTCCAAGCAGCCGCAGACCTCTTCACAGCACTGACCGACCGCATCCAGGAGGCCTCCGCAGTCGAAGTCACACACAC
TCGAATCCGTATCCCCAAAGCCCAAAAAATTGCCATCATCACCCGAGCCCCTTGGAGAGCATTACATGGCTAA

Upstream 100 bases:

>100_bases
CCGTTTCGTATATCCCCAGCTCGTCCACAACGCATCCACATAAGCCCAGCACGGGCGTTATCAGATTGTTATATTGGCGT
TGCTGATAGGATCAGGACAC

Downstream 100 bases:

>100_bases
ACACGCAATTGTTATTGGCGCCGGTGTTGCAGGTCTTGCCACCGCCGGACTCCTGGCACGCGAGGGCTACCACGTGCGCG
TCTTTGAAAAACTCGACGCC

Product: putative phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MDHRQTFLSRYDTAACKAAHEIISCYSTSFGLATKLLRGRIRTDISNLYAMVRIADEIVDGTAQMAGLEPNAVSQLLDDY
EAAVLAAPTQRFHADPILHAWALSARRCKFKTEHVQAFFTSMRNDLHKHNYEAAEFNEYVYGSAEVIGLMCLDAFLVEQH
PRPHERTMMEHGARSLGSAFQKINFLRDLEEDTHVLGRNYFPQLTGELTDATKALLVADIRTDLAAAYRCIPLLPFDARV
GVQAAADLFTALTDRIQEASAVEVTHTRIRIPKAQKIAIITRAPWRALHG

Sequences:

>Translated_290_residues
MDHRQTFLSRYDTAACKAAHEIISCYSTSFGLATKLLRGRIRTDISNLYAMVRIADEIVDGTAQMAGLEPNAVSQLLDDY
EAAVLAAPTQRFHADPILHAWALSARRCKFKTEHVQAFFTSMRNDLHKHNYEAAEFNEYVYGSAEVIGLMCLDAFLVEQH
PRPHERTMMEHGARSLGSAFQKINFLRDLEEDTHVLGRNYFPQLTGELTDATKALLVADIRTDLAAAYRCIPLLPFDARV
GVQAAADLFTALTDRIQEASAVEVTHTRIRIPKAQKIAIITRAPWRALHG
>Mature_290_residues
MDHRQTFLSRYDTAACKAAHEIISCYSTSFGLATKLLRGRIRTDISNLYAMVRIADEIVDGTAQMAGLEPNAVSQLLDDY
EAAVLAAPTQRFHADPILHAWALSARRCKFKTEHVQAFFTSMRNDLHKHNYEAAEFNEYVYGSAEVIGLMCLDAFLVEQH
PRPHERTMMEHGARSLGSAFQKINFLRDLEEDTHVLGRNYFPQLTGELTDATKALLVADIRTDLAAAYRCIPLLPFDARV
GVQAAADLFTALTDRIQEASAVEVTHTRIRIPKAQKIAIITRAPWRALHG

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 32511; Mature: 32511

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHEEEHHEEECCCCCEEEEEECCCHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHEEEHHEEECCCCCEEEEEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8917308 [H]