| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233901
Identifier: 38233901
GI number: 38233901
Start: 1327536
End: 1328096
Strand: Reverse
Name: 38233901
Synonym: DIP1315
Alternate gene names: NA
Gene position: 1328096-1327536 (Counterclockwise)
Preceding gene: 38233902
Following gene: 38233900
Centisome position: 53.37
GC content: 45.1
Gene sequence:
>561_bases GTGACTGCATCTTCTAGCAACAGCAACGGTGATAATCCATCTACTCAACGTGCCATTAGGCTTAGCGATCAGGAAATCCA GCAATATGTTGCTTTAGACGCTCCACTTACGACGGGTAAGCCGTGGGACTTAGAAATTAATTCTGCTTATCTGCGGCGAT GGGCATGGAGTGGTGCCATTTTTATTTTAGCGATTCACATTTTCTTGGCGGTTGTCGTAGCAATCGGCGACACTGGTACT ACAGTGACGCTTATTGATCAGTGGGGTTATTTCTTAGTTGGTCTTGTATTTGCGTCAGCATTTTATCTTGCTTTTGCGCG GCCACGTGTTCGAGCTAATGAAGATGGGGTAGAAGTTCGAAATTTTGTGGGTACTCGGTTCTACCCTTGGTCCGTTATAT ACGGTTTGAACTTCCCACAAGGAAGCAAATTTGCTCGCCTTGAGCTGCCAGAATTTGAATATGTCCCGTTGTGGGCCATT CAAGCTGGTGATGGTGCACGATCAATCTCAGCCATTGAAGATTTTCGTATTCTTGAGTCTCAATTTATGCCAGAGGATTA A
Upstream 100 bases:
>100_bases ATTGAAGCTGTGGCGCCTTAAGTACTAGAGTCGTGTGAAGGCAAACGCATGATAAGTGCTTCCGTATTGAGAATAATTTC AGTGAATTAGGGTAAAAATT
Downstream 100 bases:
>100_bases GCCACAGCAGTGTCTGACCCATCTACATATCGCCCAGCCCCCGGCACCATTCCAACGGAACCGGGGGTCTATAAGTTTCG TGATCCCGAAGGCAGGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTASSSNSNGDNPSTQRAIRLSDQEIQQYVALDAPLTTGKPWDLEINSAYLRRWAWSGAIFILAIHIFLAVVVAIGDTGT TVTLIDQWGYFLVGLVFASAFYLAFARPRVRANEDGVEVRNFVGTRFYPWSVIYGLNFPQGSKFARLELPEFEYVPLWAI QAGDGARSISAIEDFRILESQFMPED
Sequences:
>Translated_186_residues MTASSSNSNGDNPSTQRAIRLSDQEIQQYVALDAPLTTGKPWDLEINSAYLRRWAWSGAIFILAIHIFLAVVVAIGDTGT TVTLIDQWGYFLVGLVFASAFYLAFARPRVRANEDGVEVRNFVGTRFYPWSVIYGLNFPQGSKFARLELPEFEYVPLWAI QAGDGARSISAIEDFRILESQFMPED >Mature_185_residues TASSSNSNGDNPSTQRAIRLSDQEIQQYVALDAPLTTGKPWDLEINSAYLRRWAWSGAIFILAIHIFLAVVVAIGDTGTT VTLIDQWGYFLVGLVFASAFYLAFARPRVRANEDGVEVRNFVGTRFYPWSVIYGLNFPQGSKFARLELPEFEYVPLWAIQ AGDGARSISAIEDFRILESQFMPED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019692 [H]
Pfam domain/function: PF10756 DUF2581 [H]
EC number: NA
Molecular weight: Translated: 20837; Mature: 20706
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASSSNSNGDNPSTQRAIRLSDQEIQQYVALDAPLTTGKPWDLEINSAYLRRWAWSGAI CCCCCCCCCCCCCCHHHEEECCHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHCCCHH FILAIHIFLAVVVAIGDTGTTVTLIDQWGYFLVGLVFASAFYLAFARPRVRANEDGVEVR HHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH NFVGTRFYPWSVIYGLNFPQGSKFARLELPEFEYVPLWAIQAGDGARSISAIEDFRILES HHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH QFMPED HCCCCC >Mature Secondary Structure TASSSNSNGDNPSTQRAIRLSDQEIQQYVALDAPLTTGKPWDLEINSAYLRRWAWSGAI CCCCCCCCCCCCCHHHEEECCHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHCCCHH FILAIHIFLAVVVAIGDTGTTVTLIDQWGYFLVGLVFASAFYLAFARPRVRANEDGVEVR HHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH NFVGTRFYPWSVIYGLNFPQGSKFARLELPEFEYVPLWAIQAGDGARSISAIEDFRILES HHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH QFMPED HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]