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The map label for this gene is 38233620

Identifier: 38233620

GI number: 38233620

Start: 1003052

End: 1004173

Strand: Direct

Name: 38233620

Synonym: DIP1025

Alternate gene names: NA

Gene position: 1003052-1004173 (Clockwise)

Preceding gene: 38233619

Following gene: 38233621

Centisome position: 40.31

GC content: 51.34

Gene sequence:

>1122_bases
ATGACAGTTAGGTTCCTTCACACCTCCGATCTCCAGATCGGCATGATTCGGCGATTCCTCGATTCAGACGCACAAGCGCG
TTTCGACGCCCACCGTATCGCCGCCATCACCAAGCTAGGCGAGATCGCGGCCCAACACGATTGCGAATTCATCGTGATGG
CAGGAGACATCTTCGAACATAACTCTCTGAAACCTGCCACATTTGGACGCGCCATGGAAGCACTCAAAAAGGTCCCCGTA
CCGGTGTACCTGCTTCCGGGCAACCATGATCCCCTCACTGCGGATTCCCAACTCGCGCGAACCGAAGTGCTCGACCATGT
CCATGTCATTTCGCATTCTGAACCCATAGTTATTCGGCCAGGAGTGGAATTAGTGGGGGCGCCACTGACTGCAAAAACAG
CAACGCGTGACCTTGTTCGGCTAGCCTTGGAGCCGCTTTCGCCTGCTGGAACCACTACTCGTATCGCCGTAGGGCATGGA
CAAACACTTGCCCGCGATAATGAGATGAAACCGGATGTTATTGATCTCGCCTTCGTTGAGCAACGTATCAGTGAAGGGGT
TATCGATTACTTGGCGCTTGGTGACACTCACTCGACAGAAAGCTTGGGGTCCACAGGTCAGGTCTGGTACTCCGGTGCTC
CAGAGACTACAGATTTTGTTGAATTTCCTAGCGGCGGTGGGGAGATAGACTCAGGAAATGCGCTGATGGTTGCCATTGAA
GACCATCAAGTATTTGTGGAAAAAGTGCCAGTTGGAAAGTGGACCTTTGAGGCTGTCACATGGGACATTAACTCTTTTGA
CGATGCACAAGCCTTTATTTCGCACTTAACTGCGTATTCCGAAAAGGAAAATACGGTAGTGAAATACGCGCTTCGTGGCA
CTGTTTCCATGCGGACAATGCAATACCTTGAAACAGAGTGTGAAAAATTACGACCTATCTTTGCCGCACTCTATGAGCGG
CGGCGACTCATGGATTTACACCTAGAACCTCGCGAAGATGAGCTTGACCAATTGGGGCTTAGCGGTTTTGCTCAACAAAC
GCTGCACGAGCTCGTCGATCGTGACGATCCGGTTGCACATGATGCCCTCAAACTGCTGTTTCGACTAGCAAAGGAAGATT
AG

Upstream 100 bases:

>100_bases
ATTGATGAGCTTCGGGCAGTGAGCGACATCGAAGACATCTACTACCATCTCACCCACGAAAAGGGGTAAGCGTGTCACAG
GCGAATGATAGAACAATTTC

Downstream 100 bases:

>100_bases
TGCGTATCCGTTCCCTTGAGATCGAGCACATGCGTGCCATCACGCATCTGGTATTAAAAGATCTACCTTCCAACGGCGTC
ATCGTTATCAGTGGTGAAAA

Product: exonuclease SbcD family protein

Products: NA

Alternate protein names: DNA Repair Exonuclease; Exonuclease; Exonuclease SbcD; Ser/Thr Protein Phosphatase Family Protein; Exonuclease SbcD Family Protein; Calcineurin-Like Phosphoesterase Family; Nuclease SbcCD Subunit D; DNA Repair Exonuclease Or Phosphoesterase; DNA Repair Exonuclease SbcD

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MTVRFLHTSDLQIGMIRRFLDSDAQARFDAHRIAAITKLGEIAAQHDCEFIVMAGDIFEHNSLKPATFGRAMEALKKVPV
PVYLLPGNHDPLTADSQLARTEVLDHVHVISHSEPIVIRPGVELVGAPLTAKTATRDLVRLALEPLSPAGTTTRIAVGHG
QTLARDNEMKPDVIDLAFVEQRISEGVIDYLALGDTHSTESLGSTGQVWYSGAPETTDFVEFPSGGGEIDSGNALMVAIE
DHQVFVEKVPVGKWTFEAVTWDINSFDDAQAFISHLTAYSEKENTVVKYALRGTVSMRTMQYLETECEKLRPIFAALYER
RRLMDLHLEPREDELDQLGLSGFAQQTLHELVDRDDPVAHDALKLLFRLAKED

Sequences:

>Translated_373_residues
MTVRFLHTSDLQIGMIRRFLDSDAQARFDAHRIAAITKLGEIAAQHDCEFIVMAGDIFEHNSLKPATFGRAMEALKKVPV
PVYLLPGNHDPLTADSQLARTEVLDHVHVISHSEPIVIRPGVELVGAPLTAKTATRDLVRLALEPLSPAGTTTRIAVGHG
QTLARDNEMKPDVIDLAFVEQRISEGVIDYLALGDTHSTESLGSTGQVWYSGAPETTDFVEFPSGGGEIDSGNALMVAIE
DHQVFVEKVPVGKWTFEAVTWDINSFDDAQAFISHLTAYSEKENTVVKYALRGTVSMRTMQYLETECEKLRPIFAALYER
RRLMDLHLEPREDELDQLGLSGFAQQTLHELVDRDDPVAHDALKLLFRLAKED
>Mature_372_residues
TVRFLHTSDLQIGMIRRFLDSDAQARFDAHRIAAITKLGEIAAQHDCEFIVMAGDIFEHNSLKPATFGRAMEALKKVPVP
VYLLPGNHDPLTADSQLARTEVLDHVHVISHSEPIVIRPGVELVGAPLTAKTATRDLVRLALEPLSPAGTTTRIAVGHGQ
TLARDNEMKPDVIDLAFVEQRISEGVIDYLALGDTHSTESLGSTGQVWYSGAPETTDFVEFPSGGGEIDSGNALMVAIED
HQVFVEKVPVGKWTFEAVTWDINSFDDAQAFISHLTAYSEKENTVVKYALRGTVSMRTMQYLETECEKLRPIFAALYERR
RLMDLHLEPREDELDQLGLSGFAQQTLHELVDRDDPVAHDALKLLFRLAKED

Specific function: Unknown

COG id: COG0420

COG function: function code L; DNA repair exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41409; Mature: 41278

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRFLHTSDLQIGMIRRFLDSDAQARFDAHRIAAITKLGEIAAQHDCEFIVMAGDIFEH
CEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECC
NSLKPATFGRAMEALKKVPVPVYLLPGNHDPLTADSQLARTEVLDHVHVISHSEPIVIRP
CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECC
GVELVGAPLTAKTATRDLVRLALEPLSPAGTTTRIAVGHGQTLARDNEMKPDVIDLAFVE
CHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEECCCCCCCCCHHHHHHHH
QRISEGVIDYLALGDTHSTESLGSTGQVWYSGAPETTDFVEFPSGGGEIDSGNALMVAIE
HHHHHHHHHHHCCCCCCCCHHCCCCCCEEECCCCCCCCEEECCCCCCCCCCCCEEEEEEE
DHQVFVEKVPVGKWTFEAVTWDINSFDDAQAFISHLTAYSEKENTVVKYALRGTVSMRTM
CCEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEHHCCHHHHHH
QYLETECEKLRPIFAALYERRRLMDLHLEPREDELDQLGLSGFAQQTLHELVDRDDPVAH
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHCHHHHHHHHHHHHHCCCCCHHH
DALKLLFRLAKED
HHHHHHHHHHCCC
>Mature Secondary Structure 
TVRFLHTSDLQIGMIRRFLDSDAQARFDAHRIAAITKLGEIAAQHDCEFIVMAGDIFEH
EEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECC
NSLKPATFGRAMEALKKVPVPVYLLPGNHDPLTADSQLARTEVLDHVHVISHSEPIVIRP
CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECC
GVELVGAPLTAKTATRDLVRLALEPLSPAGTTTRIAVGHGQTLARDNEMKPDVIDLAFVE
CHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEECCCCCCCCCHHHHHHHH
QRISEGVIDYLALGDTHSTESLGSTGQVWYSGAPETTDFVEFPSGGGEIDSGNALMVAIE
HHHHHHHHHHHCCCCCCCCHHCCCCCCEEECCCCCCCCEEECCCCCCCCCCCCEEEEEEE
DHQVFVEKVPVGKWTFEAVTWDINSFDDAQAFISHLTAYSEKENTVVKYALRGTVSMRTM
CCEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEHHCCHHHHHH
QYLETECEKLRPIFAALYERRRLMDLHLEPREDELDQLGLSGFAQQTLHELVDRDDPVAH
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHCHHHHHHHHHHHHHCCCCCHHH
DALKLLFRLAKED
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA