Click here to switch to the map view.

The map label for this gene is tatB

Identifier: 38233591

GI number: 38233591

Start: 965352

End: 965795

Strand: Direct

Name: tatB

Synonym: DIP0996

Alternate gene names: 38233591

Gene position: 965352-965795 (Clockwise)

Preceding gene: 38233590

Following gene: 38233595

Centisome position: 38.79

GC content: 49.55

Gene sequence:

>444_bases
GTGTTTTCCTCCATTGGCTGGCCAGAAATCTTCACGGTCCTCATTCTCGGATTGATCATCATTGGTCCTGAGCGACTCCC
GAAAGTTATCGAGGACGTTCGCGCTGCGATTTATGCTGCAAAAAAGGCCATTAACAATGCCAAAGAAGAGCTCAATGGCA
ATTTGGGTGCGGAGTTTGATGAGTTCCGTGAACCGATTAACAAGATCGCGTCTATTCAACGCATGGGGCCCAAAGCGGTG
CTCACTAAAGCTTTGTTTGATGAGGACGAAAACTTCATGGATAACTTTGATCCGAAAAAGATCATGGCCAGTGGCACTGA
AGGAGAGGCGTACCGCGAGCGTGGCATAAATCCGCAGCCCGCTGGTGATTCAGCCTCTCCTCAAACTCCTAGCAACAAAG
AATCCCAGCCAAAGGCGGGCTTTAGCTGGGATGACATCACTTAG

Upstream 100 bases:

>100_bases
AAATATTTACAAAACTACAAAGACTCTTCGTGAGGCACGCAACGAAGCCTTGCGACAATACGATCGTTAAAATTTCGGTC
AACAGGCTAGAGTAGGAGGG

Downstream 100 bases:

>100_bases
TTTTAGTGGCTTGTAACTCCTAGTCCGAGTGGTTTTCCAGCTAAGGAATCACGGCGGACGACGAGTTTATCTGCAATCTT
ATGGATTGCGGCGCCAGTTG

Product: sec-independent translocase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MFSSIGWPEIFTVLILGLIIIGPERLPKVIEDVRAAIYAAKKAINNAKEELNGNLGAEFDEFREPINKIASIQRMGPKAV
LTKALFDEDENFMDNFDPKKIMASGTEGEAYRERGINPQPAGDSASPQTPSNKESQPKAGFSWDDIT

Sequences:

>Translated_147_residues
MFSSIGWPEIFTVLILGLIIIGPERLPKVIEDVRAAIYAAKKAINNAKEELNGNLGAEFDEFREPINKIASIQRMGPKAV
LTKALFDEDENFMDNFDPKKIMASGTEGEAYRERGINPQPAGDSASPQTPSNKESQPKAGFSWDDIT
>Mature_147_residues
MFSSIGWPEIFTVLILGLIIIGPERLPKVIEDVRAAIYAAKKAINNAKEELNGNLGAEFDEFREPINKIASIQRMGPKAV
LTKALFDEDENFMDNFDPKKIMASGTEGEAYRERGINPQPAGDSASPQTPSNKESQPKAGFSWDDIT

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG1826

COG function: function code U; Sec-independent protein secretion pathway components

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Probable)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TATB_CORDI (Q6NHY4)

Other databases:

- EMBL:   BX248356
- RefSeq:   NP_939358.1
- GeneID:   2650647
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP0996
- NMPDR:   fig|257309.1.peg.949
- HOGENOM:   HBG751935
- OMA:   PKVIQDV
- ProtClustDB:   PRK00182
- BioCyc:   CDIP257309:DIP0996-MONOMER
- HAMAP:   MF_00237
- InterPro:   IPR018448
- InterPro:   IPR003998
- PRINTS:   PR01506
- TIGRFAMs:   TIGR01410

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16199; Mature: 16199

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11676f08)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSSIGWPEIFTVLILGLIIIGPERLPKVIEDVRAAIYAAKKAINNAKEELNGNLGAEFD
CCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
EFREPINKIASIQRMGPKAVLTKALFDEDENFMDNFDPKKIMASGTEGEAYRERGINPQP
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHCCCCCCC
AGDSASPQTPSNKESQPKAGFSWDDIT
CCCCCCCCCCCCCCCCCCCCCCCCCCH
>Mature Secondary Structure
MFSSIGWPEIFTVLILGLIIIGPERLPKVIEDVRAAIYAAKKAINNAKEELNGNLGAEFD
CCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
EFREPINKIASIQRMGPKAVLTKALFDEDENFMDNFDPKKIMASGTEGEAYRERGINPQP
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHCCCCCCC
AGDSASPQTPSNKESQPKAGFSWDDIT
CCCCCCCCCCCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14602910