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The map label for this gene is oppA [C]

Identifier: 38233565

GI number: 38233565

Start: 941820

End: 943349

Strand: Direct

Name: oppA [C]

Synonym: DIP0970

Alternate gene names: 38233565

Gene position: 941820-943349 (Clockwise)

Preceding gene: 38233564

Following gene: 38233566

Centisome position: 37.84

GC content: 54.64

Gene sequence:

>1530_bases
ATGTCAAACAAGCACCGTATCCTCGTTCCACTACTGGCTACGGCGCTTGTGTCATGTTCAGCCAATCCAGGACCTGCACC
CGTGGAGAAGGAACAACCTACTTCCACGACCACCACGCCTGCGAAAAAGGCGAAAAAGACCTCGGAGATCGCGGTGGGTA
TCGACCCCATCAACGGCGGCCTCAACCCGCACATGCTTGCCGACGACTCCACCTTCGTCAGATCCCTTGCAACCTTAGTG
CTGCCGAGTTCTTATATAGGCGGTGAGCTCAATAGCGATTTGTTAGAAAGTGTGGACGACGTTCCCCCTCCTAGTGGATC
GAAGGCTGTACAAACAATCCGCTACAAGATCCGCCCAGAGGCCCAATGGTCGGATGCCACGCCAATCACGGTGTCAGACT
TTGAATACCTGTGGCATGCGATCGTCGAAACGCCCGGCACTCTAGGTGCGCCGTACTATCGTGCGATCGGGCAAATCCGT
TCAGCTGATGGCGGCCGTACGGTCGACGTCGATTTGGCTCAGCCATTGCACGATTGGCGCGTACTTTTTAATAATCTGTT
GCCCAGCCACGTGCTTCGTGGTGGGGACTCTGATTTTTCCACCGTGCTTGCCGACGGCATCCCTGCTTCCGCTGGTCGCT
ACTCTTTTGCAGGTGTTGATCGTCAGCGGGGGATTGTCACCTTGAATCGCAATGATCGGTTCTGGGGAGAAAAGCCGGCT
ACCGTGGAAAACATCAAGTTCCGCGAGGTGACTGATATTGCCCAAGGTCGCGAGCTTTTACGTACGGGTCAGATCAAGTT
CCTTGATATCACGCCTACTGAGGTGGCAAGGGAAGCATTTGAGCTCATGCCGAACACGCAGGTGCGCACGACCACCACTT
CGCTTAATCTTCAGCTGATAGCCAATACCCATTTGACTCTTGAGCAGCGTGCTGACCTTCAATCGCTTATCGACGTCCAC
ACCGTTGCTCGCATTGCCATGGGGCGAAGTACTGATCTTGGTGTTGGTGATCAGCCGTATGAGCCACACGCGGATCACTT
GATGTCTCTAGGAAGGCCGGTGCGAATCGGAGTAGATCCCAGTGACCCAGAAGCCCAGATGGCTGCCCGAGTGCTCTCGG
ATGTTCTGGCTCGAAAATCAGTGAAAACCCAGTTGGTAGAAACCGACACCACCGACCTCATTGGTTCAAAATTAGCCGCG
TCAGCTGTCGATGCGATCATCACATGGAGTGCCGCTAACGCCATGGAAAAACTACAGTGTGCTCCCACACCGACCAACGT
CAACATCGCATTGTGGTGCGACCCGGATACTGACCAACACATAAACGATGTGCTCAGCGGAGCCATGACGCGTGAAGACT
TCAATTCCTACGCCGCTGACGTAGACCACCAGCAGCACCTTACCACCGTCATCGCACCCGACACCCGCCTCCTAGTCCTC
GGCACACAACCCGAAGGAAAAGGAACGAAATTTACCAACTGGCCCATGGGACTTACCTCCATCGGGCAATGGAGCATCAA
CGAGGAATAA

Upstream 100 bases:

>100_bases
ACCCCTGACGTGCTGCGCGTACGCAAGGTCATCCTAAATGCAACCGAGCGTGGTCGCGCGCGTGCACGCGAAAAGGCTCG
TAACAAGTAAGATAGGTTCC

Downstream 100 bases:

>100_bases
TGCGAGATCTCATCGGATTTAAAGCAGTAGCAGTACACGCACACCCTGACGACGAAGCCATCTGGACCGGCGGCCTCCTC
GCCAACCTAGCTGCCCGAGG

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MSNKHRILVPLLATALVSCSANPGPAPVEKEQPTSTTTTPAKKAKKTSEIAVGIDPINGGLNPHMLADDSTFVRSLATLV
LPSSYIGGELNSDLLESVDDVPPPSGSKAVQTIRYKIRPEAQWSDATPITVSDFEYLWHAIVETPGTLGAPYYRAIGQIR
SADGGRTVDVDLAQPLHDWRVLFNNLLPSHVLRGGDSDFSTVLADGIPASAGRYSFAGVDRQRGIVTLNRNDRFWGEKPA
TVENIKFREVTDIAQGRELLRTGQIKFLDITPTEVAREAFELMPNTQVRTTTTSLNLQLIANTHLTLEQRADLQSLIDVH
TVARIAMGRSTDLGVGDQPYEPHADHLMSLGRPVRIGVDPSDPEAQMAARVLSDVLARKSVKTQLVETDTTDLIGSKLAA
SAVDAIITWSAANAMEKLQCAPTPTNVNIALWCDPDTDQHINDVLSGAMTREDFNSYAADVDHQQHLTTVIAPDTRLLVL
GTQPEGKGTKFTNWPMGLTSIGQWSINEE

Sequences:

>Translated_509_residues
MSNKHRILVPLLATALVSCSANPGPAPVEKEQPTSTTTTPAKKAKKTSEIAVGIDPINGGLNPHMLADDSTFVRSLATLV
LPSSYIGGELNSDLLESVDDVPPPSGSKAVQTIRYKIRPEAQWSDATPITVSDFEYLWHAIVETPGTLGAPYYRAIGQIR
SADGGRTVDVDLAQPLHDWRVLFNNLLPSHVLRGGDSDFSTVLADGIPASAGRYSFAGVDRQRGIVTLNRNDRFWGEKPA
TVENIKFREVTDIAQGRELLRTGQIKFLDITPTEVAREAFELMPNTQVRTTTTSLNLQLIANTHLTLEQRADLQSLIDVH
TVARIAMGRSTDLGVGDQPYEPHADHLMSLGRPVRIGVDPSDPEAQMAARVLSDVLARKSVKTQLVETDTTDLIGSKLAA
SAVDAIITWSAANAMEKLQCAPTPTNVNIALWCDPDTDQHINDVLSGAMTREDFNSYAADVDHQQHLTTVIAPDTRLLVL
GTQPEGKGTKFTNWPMGLTSIGQWSINEE
>Mature_508_residues
SNKHRILVPLLATALVSCSANPGPAPVEKEQPTSTTTTPAKKAKKTSEIAVGIDPINGGLNPHMLADDSTFVRSLATLVL
PSSYIGGELNSDLLESVDDVPPPSGSKAVQTIRYKIRPEAQWSDATPITVSDFEYLWHAIVETPGTLGAPYYRAIGQIRS
ADGGRTVDVDLAQPLHDWRVLFNNLLPSHVLRGGDSDFSTVLADGIPASAGRYSFAGVDRQRGIVTLNRNDRFWGEKPAT
VENIKFREVTDIAQGRELLRTGQIKFLDITPTEVAREAFELMPNTQVRTTTTSLNLQLIANTHLTLEQRADLQSLIDVHT
VARIAMGRSTDLGVGDQPYEPHADHLMSLGRPVRIGVDPSDPEAQMAARVLSDVLARKSVKTQLVETDTTDLIGSKLAAS
AVDAIITWSAANAMEKLQCAPTPTNVNIALWCDPDTDQHINDVLSGAMTREDFNSYAADVDHQQHLTTVIAPDTRLLVLG
TQPEGKGTKFTNWPMGLTSIGQWSINEE

Specific function: May directly or indirectly regulate the accessibility of the key branch point intermediate, monoacyl phosphatidylinositol tetramannoside (AcPIM4), to the elongating alpha-1,6 mannosyltransferases which could regulate the lipoarabinomannans (LAMs) biosynth

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

None

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 55288; Mature: 55157

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKHRILVPLLATALVSCSANPGPAPVEKEQPTSTTTTPAKKAKKTSEIAVGIDPINGG
CCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCC
LNPHMLADDSTFVRSLATLVLPSSYIGGELNSDLLESVDDVPPPSGSKAVQTIRYKIRPE
CCCCEECCCHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCCCCCCCHHHHEEEEEECCC
AQWSDATPITVSDFEYLWHAIVETPGTLGAPYYRAIGQIRSADGGRTVDVDLAQPLHDWR
CCCCCCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH
VLFNNLLPSHVLRGGDSDFSTVLADGIPASAGRYSFAGVDRQRGIVTLNRNDRFWGEKPA
HHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCC
TVENIKFREVTDIAQGRELLRTGQIKFLDITPTEVAREAFELMPNTQVRTTTTSLNLQLI
CCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEEEEEEEEE
ANTHLTLEQRADLQSLIDVHTVARIAMGRSTDLGVGDQPYEPHADHLMSLGRPVRIGVDP
ECCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCC
SDPEAQMAARVLSDVLARKSVKTQLVETDTTDLIGSKLAASAVDAIITWSAANAMEKLQC
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHCC
APTPTNVNIALWCDPDTDQHINDVLSGAMTREDFNSYAADVDHQQHLTTVIAPDTRLLVL
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCEEEEE
GTQPEGKGTKFTNWPMGLTSIGQWSINEE
ECCCCCCCCEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNKHRILVPLLATALVSCSANPGPAPVEKEQPTSTTTTPAKKAKKTSEIAVGIDPINGG
CCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCC
LNPHMLADDSTFVRSLATLVLPSSYIGGELNSDLLESVDDVPPPSGSKAVQTIRYKIRPE
CCCCEECCCHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCCCCCCCHHHHEEEEEECCC
AQWSDATPITVSDFEYLWHAIVETPGTLGAPYYRAIGQIRSADGGRTVDVDLAQPLHDWR
CCCCCCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH
VLFNNLLPSHVLRGGDSDFSTVLADGIPASAGRYSFAGVDRQRGIVTLNRNDRFWGEKPA
HHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCC
TVENIKFREVTDIAQGRELLRTGQIKFLDITPTEVAREAFELMPNTQVRTTTTSLNLQLI
CCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEEEEEEEEE
ANTHLTLEQRADLQSLIDVHTVARIAMGRSTDLGVGDQPYEPHADHLMSLGRPVRIGVDP
ECCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCC
SDPEAQMAARVLSDVLARKSVKTQLVETDTTDLIGSKLAASAVDAIITWSAANAMEKLQC
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHCC
APTPTNVNIALWCDPDTDQHINDVLSGAMTREDFNSYAADVDHQQHLTTVIAPDTRLLVL
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCEEEEE
GTQPEGKGTKFTNWPMGLTSIGQWSINEE
ECCCCCCCCEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA