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The map label for this gene is 38233560

Identifier: 38233560

GI number: 38233560

Start: 937248

End: 937976

Strand: Reverse

Name: 38233560

Synonym: DIP0964

Alternate gene names: NA

Gene position: 937976-937248 (Counterclockwise)

Preceding gene: 38233561

Following gene: 38233548

Centisome position: 37.69

GC content: 63.37

Gene sequence:

>729_bases
ATGAAGAAACTTCGTACCCTAGCCGTAACCCTGACCGCAATCGCAGCATCAACCATGGCGACCATGCCAGCACAAGCAGT
GATTAGTCCGACACCGTCACATCAAGTTTCGCTAGCGTACGTCAGTTTTGACAACATGCAGTGCACCGGCACGCTCGTCA
GCCCCACCACCGTGCTCACAGCACGACACTGCCTCAACGGCGGCCTCGGCCACGTCCGACTCGGCGCCGATCACTTCACC
GCCGTACGTGCCGTGGCACACCCCCAAGCAGACCTTGCCGTCCTCCACCTCGATCGCCCAGCGCCAATAGCGCCATCCGC
AATCTCTGGACGCCACACCCAACCAGGTAACCGCTTCGGAGTTGCCGGCTACGGAAGCACCTTCCCCGGCATCCCCATGG
CAGCAGCTGCAACCATGCAACGCCGCGTCACCGACGTCCCCAGCCCCGACCGCCAAGCAGTCATGATCGAAAACCACATC
AGCCAAGGTGTACTACGCCCAGGCGACTCTGGCGGCCCCCTCCTAGAGGGCAATCACGTCGTAGGAGTACTCAGCATGAG
CAGTGCATCCGGCCGCGTCGGCTGGTACATCCCCACCGCAGAACACGCCGACTGGATCGCGGCGGCAGCCGGAATCCCCG
CACCGGGAAGCGTCGACAAGCCCGCCCCGCTCGTCGACGCCACAGCCTTCCCGACGCAAGAGCCAAGCCTCGCTAGCCTA
TCCTCCTAG

Upstream 100 bases:

>100_bases
CATGGTCACCCACCCACGCCTCATTCAGCGCCCAATTGTGGCAACATGCAAGGGAACGCGGATCGCCCGACCAACCGAAA
TTCTGAAAGAAATTCTCTAG

Downstream 100 bases:

>100_bases
CCGAATCGCCAGCGATCTCGGAAGCCAAGGAATCCTTCGGCATGTTAGAAAATGTGAAAGTTTAATGCGGGCACAAACGC
GTTGAAAGAGCAACACACCA

Product: putative protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKKLRTLAVTLTAIAASTMATMPAQAVISPTPSHQVSLAYVSFDNMQCTGTLVSPTTVLTARHCLNGGLGHVRLGADHFT
AVRAVAHPQADLAVLHLDRPAPIAPSAISGRHTQPGNRFGVAGYGSTFPGIPMAAAATMQRRVTDVPSPDRQAVMIENHI
SQGVLRPGDSGGPLLEGNHVVGVLSMSSASGRVGWYIPTAEHADWIAAAAGIPAPGSVDKPAPLVDATAFPTQEPSLASL
SS

Sequences:

>Translated_242_residues
MKKLRTLAVTLTAIAASTMATMPAQAVISPTPSHQVSLAYVSFDNMQCTGTLVSPTTVLTARHCLNGGLGHVRLGADHFT
AVRAVAHPQADLAVLHLDRPAPIAPSAISGRHTQPGNRFGVAGYGSTFPGIPMAAAATMQRRVTDVPSPDRQAVMIENHI
SQGVLRPGDSGGPLLEGNHVVGVLSMSSASGRVGWYIPTAEHADWIAAAAGIPAPGSVDKPAPLVDATAFPTQEPSLASL
SS
>Mature_242_residues
MKKLRTLAVTLTAIAASTMATMPAQAVISPTPSHQVSLAYVSFDNMQCTGTLVSPTTVLTARHCLNGGLGHVRLGADHFT
AVRAVAHPQADLAVLHLDRPAPIAPSAISGRHTQPGNRFGVAGYGSTFPGIPMAAAATMQRRVTDVPSPDRQAVMIENHI
SQGVLRPGDSGGPLLEGNHVVGVLSMSSASGRVGWYIPTAEHADWIAAAAGIPAPGSVDKPAPLVDATAFPTQEPSLASL
SS

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 peptidase S1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001314 [H]

Pfam domain/function: PF00089 Trypsin [H]

EC number: NA

Molecular weight: Translated: 24900; Mature: 24900

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS50240 TRYPSIN_DOM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLRTLAVTLTAIAASTMATMPAQAVISPTPSHQVSLAYVSFDNMQCTGTLVSPTTVLT
CCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEEECCEEEEEEEECCHHHHH
ARHCLNGGLGHVRLGADHFTAVRAVAHPQADLAVLHLDRPAPIAPSAISGRHTQPGNRFG
HHHHHCCCCCEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEE
VAGYGSTFPGIPMAAAATMQRRVTDVPSPDRQAVMIENHISQGVLRPGDSGGPLLEGNHV
ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCCCCCCCCEEECCEE
VGVLSMSSASGRVGWYIPTAEHADWIAAAAGIPAPGSVDKPAPLVDATAFPTQEPSLASL
EEEEEECCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
SS
CC
>Mature Secondary Structure
MKKLRTLAVTLTAIAASTMATMPAQAVISPTPSHQVSLAYVSFDNMQCTGTLVSPTTVLT
CCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEEECCEEEEEEEECCHHHHH
ARHCLNGGLGHVRLGADHFTAVRAVAHPQADLAVLHLDRPAPIAPSAISGRHTQPGNRFG
HHHHHCCCCCEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEE
VAGYGSTFPGIPMAAAATMQRRVTDVPSPDRQAVMIENHISQGVLRPGDSGGPLLEGNHV
ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECHHHCCCCCCCCCCCCEEECCEE
VGVLSMSSASGRVGWYIPTAEHADWIAAAAGIPAPGSVDKPAPLVDATAFPTQEPSLASL
EEEEEECCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
SS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]