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The map label for this gene is 38233550

Identifier: 38233550

GI number: 38233550

Start: 926261

End: 927016

Strand: Direct

Name: 38233550

Synonym: DIP0954

Alternate gene names: NA

Gene position: 926261-927016 (Clockwise)

Preceding gene: 38233549

Following gene: 38233551

Centisome position: 37.22

GC content: 57.8

Gene sequence:

>756_bases
ATGAACCTTCTACAAGCCACCAACCCCGTCACCCGAGTAGCAGCACTCATGTTGTTGACCACCCCGCTATTACTCAGCGT
CGATGTCGTGTCAGCGGCCGTATCTCTTGTCCTAACGATCGTGCTGTCACCACTTGCAGGTGTTGGCGTGGGCACGCTGC
TGCGGCGCGGGTTCCCGCTTCTCATTGCTACCCCCATCGCGGGAATATCCATGGCGCTTTATGGTCGACCCGAAGGACAC
GAATACTTCTCGTTCCTTTTTGCCCACGTTACTGATAACTCCCTCCAGCTAGCCGCAGCGATCATGGTGCGTGTACTGGC
AGTAGGGCTTCCAGCGATAGTTCTTCTCGCGCACATCGACCCCACCGAACTAGGAGATGGCCTCGCACAAATCCTTCGTC
TGCCACATCGCTTTGTCATCTCGGCTGTCGCAAGCACCCGAATGATCAGCCTTTTTACTAGAGACTGGCAGTCGATGCGA
CGTGCGCGCCGGGTGCGCGGCATTGATGATTCGAATCGGGTTCGGTCAAGTTTTTCCATGGTGTTTGGCCTGTTGGTGCT
CGCTGTTCGTCGCGGCTCCAAATTGGCGACAGCTATGGAGGCCCGTGGTTTTGGGCGCAAATCTGAGCGTACGTGGGCGC
GGGAATCTACGGTGGGTGCCGCTGATGCGGTGTTGTTGCTGGTGTGCGTGGCGGCGTCGACAAGCGCGATCGTGGCGGCG
ATCGTGACGGGAAGTTTTAGGTTTCTCGGCGCATGA

Upstream 100 bases:

>100_bases
TTACCTTGCTGCGTGAGCTAACCGATGCTGGTACCACGGTTGTTTCGATCACTCACGACGAGCTCTACCGACGTTGCTTG
GGTGATAAGGAGATTGCATT

Downstream 100 bases:

>100_bases
TCGTGCTTATCGACGGCCCCTCCGGTTCCGGGAAAACTACCTTCGCGGGATTTCTTGGCGAGATTTTAGGAATGCGCATC
GTGCATTTTGATGACCTGTA

Product: ABC transporter

Products: NA

Alternate protein names: ABC Transporter Permease; ABC-Type Cobalt Transport System Permease Component CbiQ; ABC-Type Transporter Permease Components; ABC Transporter Integral Membrane Subunit; Cobalt ABC Transporter Permease; Permease Of Facilitator Superfamily; ABC Cobalt Transporter; ABC Transporter Related Protein; ABC-Type Cobalt Transport System Permease Protein; ABC Transporter; ABC Transporter Permease Protein

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNLLQATNPVTRVAALMLLTTPLLLSVDVVSAAVSLVLTIVLSPLAGVGVGTLLRRGFPLLIATPIAGISMALYGRPEGH
EYFSFLFAHVTDNSLQLAAAIMVRVLAVGLPAIVLLAHIDPTELGDGLAQILRLPHRFVISAVASTRMISLFTRDWQSMR
RARRVRGIDDSNRVRSSFSMVFGLLVLAVRRGSKLATAMEARGFGRKSERTWARESTVGAADAVLLLVCVAASTSAIVAA
IVTGSFRFLGA

Sequences:

>Translated_251_residues
MNLLQATNPVTRVAALMLLTTPLLLSVDVVSAAVSLVLTIVLSPLAGVGVGTLLRRGFPLLIATPIAGISMALYGRPEGH
EYFSFLFAHVTDNSLQLAAAIMVRVLAVGLPAIVLLAHIDPTELGDGLAQILRLPHRFVISAVASTRMISLFTRDWQSMR
RARRVRGIDDSNRVRSSFSMVFGLLVLAVRRGSKLATAMEARGFGRKSERTWARESTVGAADAVLLLVCVAASTSAIVAA
IVTGSFRFLGA
>Mature_251_residues
MNLLQATNPVTRVAALMLLTTPLLLSVDVVSAAVSLVLTIVLSPLAGVGVGTLLRRGFPLLIATPIAGISMALYGRPEGH
EYFSFLFAHVTDNSLQLAAAIMVRVLAVGLPAIVLLAHIDPTELGDGLAQILRLPHRFVISAVASTRMISLFTRDWQSMR
RARRVRGIDDSNRVRSSFSMVFGLLVLAVRRGSKLATAMEARGFGRKSERTWARESTVGAADAVLLLVCVAASTSAIVAA
IVTGSFRFLGA

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26748; Mature: 26748

Theoretical pI: Translated: 11.96; Mature: 11.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLQATNPVTRVAALMLLTTPLLLSVDVVSAAVSLVLTIVLSPLAGVGVGTLLRRGFPL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCE
LIATPIAGISMALYGRPEGHEYFSFLFAHVTDNSLQLAAAIMVRVLAVGLPAIVLLAHID
EEECCHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTELGDGLAQILRLPHRFVISAVASTRMISLFTRDWQSMRRARRVRGIDDSNRVRSSFSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VFGLLVLAVRRGSKLATAMEARGFGRKSERTWARESTVGAADAVLLLVCVAASTSAIVAA
HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IVTGSFRFLGA
HHHCCHHHCCC
>Mature Secondary Structure
MNLLQATNPVTRVAALMLLTTPLLLSVDVVSAAVSLVLTIVLSPLAGVGVGTLLRRGFPL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCE
LIATPIAGISMALYGRPEGHEYFSFLFAHVTDNSLQLAAAIMVRVLAVGLPAIVLLAHID
EEECCHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTELGDGLAQILRLPHRFVISAVASTRMISLFTRDWQSMRRARRVRGIDDSNRVRSSFSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VFGLLVLAVRRGSKLATAMEARGFGRKSERTWARESTVGAADAVLLLVCVAASTSAIVAA
HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IVTGSFRFLGA
HHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA