| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
Click here to switch to the map view.
The map label for this gene is gloB [H]
Identifier: 21674855
GI number: 21674855
Start: 1942679
End: 1943326
Strand: Reverse
Name: gloB [H]
Synonym: CT2045
Alternate gene names: 21674855
Gene position: 1943326-1942679 (Counterclockwise)
Preceding gene: 21674856
Following gene: 21674854
Centisome position: 90.18
GC content: 58.33
Gene sequence:
>648_bases ATGAGCGTGCAGGTTGAGCAGATCAGAACGGGCGGGGATCGCAATTTCGGCTATCTCTGCGCCGACAAGGCGACAGGTGA GGCGTTTGCGGTCGATCCCTCCAATTCACCAAAAGTGCTTGTCGATGCCGCCGCCCGCAAGGGTTGGCAGCTCGTGCGGG CCTTCTGCACCCATGGCCATGCCGACCACACCAACGGCAACGAGGAGTTCGAGCGGTTGACCGGCATCCGGGTGCTGCTC TTCGGCGACCGCGACGCCCGTTTGGGAATCGAGGTGATGCACGGCGCGAGTTTTCCGCTTGGCGAGGGCGTTGTCGAAAT CATCCACACCCCCGGCCACACGCTGGACTCGATCTGCCTGCTTGCCGGAGACGCGCTTTTTACCGGCGATACGCTCTTTG TAGGCAAGGTTGGCGGCACGTGGAGCGAGGCGGATGCCCGGTTGGAGTACCGTTCACTGCACGAGCGACTGATGGTGCTA CCGGCTGGTACGAATGTATTTCCCGGTCATGATTATGGCACGGCGCCAGTTTCAACCATTGGTCATGAAAAAACTACCAA TCCGTTTCTGCTTCAGCCCGATGCAGAATCGTTTATTGACCTGAAAAACAACTGGTCTGCCTACAAAAAAGCACACGGAA TCAGCTGA
Upstream 100 bases:
>100_bases TCATGAAAGACATTGAGGCGAACCCTCTTGCCGCCGACCCGGCGTTTCCGGCAAAGGCGTTCATGATGAATGTCGAAAAG ATGATCTGAGGAGCGTGGCC
Downstream 100 bases:
>100_bases ATTTTTCCCTGTTTGCTTGATTTTTCTCTCTTCTTTGCTTTTATTCTTTAATTATGCTTCTTGGGGTTTTTGCCTCGTAG CGCGCCTTCCTTACAGTTAA
Product: hydroxyacylglutathione hydrolase, putative
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MSVQVEQIRTGGDRNFGYLCADKATGEAFAVDPSNSPKVLVDAAARKGWQLVRAFCTHGHADHTNGNEEFERLTGIRVLL FGDRDARLGIEVMHGASFPLGEGVVEIIHTPGHTLDSICLLAGDALFTGDTLFVGKVGGTWSEADARLEYRSLHERLMVL PAGTNVFPGHDYGTAPVSTIGHEKTTNPFLLQPDAESFIDLKNNWSAYKKAHGIS
Sequences:
>Translated_215_residues MSVQVEQIRTGGDRNFGYLCADKATGEAFAVDPSNSPKVLVDAAARKGWQLVRAFCTHGHADHTNGNEEFERLTGIRVLL FGDRDARLGIEVMHGASFPLGEGVVEIIHTPGHTLDSICLLAGDALFTGDTLFVGKVGGTWSEADARLEYRSLHERLMVL PAGTNVFPGHDYGTAPVSTIGHEKTTNPFLLQPDAESFIDLKNNWSAYKKAHGIS >Mature_214_residues SVQVEQIRTGGDRNFGYLCADKATGEAFAVDPSNSPKVLVDAAARKGWQLVRAFCTHGHADHTNGNEEFERLTGIRVLLF GDRDARLGIEVMHGASFPLGEGVVEIIHTPGHTLDSICLLAGDALFTGDTLFVGKVGGTWSEADARLEYRSLHERLMVLP AGTNVFPGHDYGTAPVSTIGHEKTTNPFLLQPDAESFIDLKNNWSAYKKAHGIS
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538320, Length=166, Percent_Identity=37.3493975903614, Blast_Score=91, Evalue=6e-19, Organism=Homo sapiens, GI94538322, Length=166, Percent_Identity=37.3493975903614, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI41327741, Length=203, Percent_Identity=31.5270935960591, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI14150041, Length=217, Percent_Identity=33.1797235023041, Blast_Score=78, Evalue=4e-15, Organism=Homo sapiens, GI46361987, Length=166, Percent_Identity=36.7469879518072, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI116642887, Length=227, Percent_Identity=29.5154185022026, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI21703352, Length=227, Percent_Identity=29.5154185022026, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI1786406, Length=184, Percent_Identity=33.695652173913, Blast_Score=62, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17536925, Length=231, Percent_Identity=28.1385281385281, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17538952, Length=200, Percent_Identity=25, Blast_Score=64, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320478, Length=198, Percent_Identity=28.7878787878788, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI221330176, Length=203, Percent_Identity=31.5270935960591, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI21356335, Length=206, Percent_Identity=32.0388349514563, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24667711, Length=206, Percent_Identity=32.0388349514563, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24667703, Length=220, Percent_Identity=30.4545454545455, Blast_Score=89, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 23289; Mature: 23158
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQVEQIRTGGDRNFGYLCADKATGEAFAVDPSNSPKVLVDAAARKGWQLVRAFCTHGH CCEEHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCC ADHTNGNEEFERLTGIRVLLFGDRDARLGIEVMHGASFPLGEGVVEIIHTPGHTLDSICL CCCCCCHHHHHHHCCEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHH LAGDALFTGDTLFVGKVGGTWSEADARLEYRSLHERLMVLPAGTNVFPGHDYGTAPVSTI HHCCEEEECCEEEEECCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCHHHC GHEKTTNPFLLQPDAESFIDLKNNWSAYKKAHGIS CCCCCCCCEEECCCHHHHHCCCCCHHHHHHHCCCC >Mature Secondary Structure SVQVEQIRTGGDRNFGYLCADKATGEAFAVDPSNSPKVLVDAAARKGWQLVRAFCTHGH CEEHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCC ADHTNGNEEFERLTGIRVLLFGDRDARLGIEVMHGASFPLGEGVVEIIHTPGHTLDSICL CCCCCCHHHHHHHCCEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHH LAGDALFTGDTLFVGKVGGTWSEADARLEYRSLHERLMVLPAGTNVFPGHDYGTAPVSTI HHCCEEEECCEEEEECCCCCCCCHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCHHHC GHEKTTNPFLLQPDAESFIDLKNNWSAYKKAHGIS CCCCCCCCEEECCCHHHHHCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA