| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is thrA [H]
Identifier: 21674840
GI number: 21674840
Start: 1927055
End: 1929511
Strand: Reverse
Name: thrA [H]
Synonym: CT2030
Alternate gene names: 21674840
Gene position: 1929511-1927055 (Counterclockwise)
Preceding gene: 21674842
Following gene: 21674839
Centisome position: 89.54
GC content: 60.44
Gene sequence:
>2457_bases ATGAGGGTATTCAAGTTCGGAGGTTCGTCGATCGCTTCGGCGGCAAAGATCAGCAATGTGGCTGGCATTATCAGGCGTGA GTTGAAAAGCACTCCGCTGGTGGTTGTGGTGTCAGCGATTGGCAAGGTGACCGACATGCTTGCCGAGACTGCGGCGCTGG CGGGGAATGGTGATGCGGCATACCGCGATAAACTCGAAGGAATCGCCTCGCTGCATGGCGGGATCATCCGTGAACTGTTC GGTACGGAGGCGTCAGCAGAAGAGACCTGGTTGGGTGAGATGATGGCTGAACTGAACGATGTGCTGCATGGCGTTTTTCT GCTCAGGGAGCTTTCAGACAAGAGTCTCGCCCTTGTGCTGAGTTACGGCGAACGGCTGTCGTGCCGGATCGTGAGCCGCT ATATGCACGTATCGGGTACCCCAGCTGAATGCGTCGATGCACGCAGTGTGATCGTGACCGACGACAACCATTGCTTTGCC AAGGTGGATCGTCTGGCGACAGGAAAGCTGATTCACGAACGCTTCCGGAGTTTCGACGTTCTGCCGGTGGTCACCGGATT CATCGCCTCCGCGCCGGATGGCAGTGTGACCAACCTTGGGCGCGGCGGTTCCGATTTCACGGCGACGATTCTCGGCGCGG CGCTTCATGCCGAAGAGGTGTGGATCTGGACCGATGTCGATGGCTTCTACAGCGCCGATCCCAAGCGCGTGCCCGACGCG CGGGTCATTCCGGAGATCAGCTACGCCGAGGCGATGGAGCTGTCGCACGCCGGCGCGAAGGTGCTGCATCCACTGGCCGT GCAGCCGGTCATGAAGGCGGGTATTCCGTTGCGCATAAAGAACTCTTTCAATCCCGAAAAACCTGGCACGAGGATCGGTA TCGAGGCTGCGGGTGCAGAGGCGCTTCCGGGTACGGTGACCGGACTGACCTCGATCAACCATGTGGTGCTGCTCAGTCTT TCCGGCAGCGGCATGGCGGGCGTGCCGGGAACGGCGTCTCGGCTGTTTACCTGCCTCGCTCGCCACAGCATCAACATTAT CTTCATCTCGCAGGCCTCGTCGGAGCAGTCGATCAGCCTGGCCATAGCGCCCGGACAGGCGTCGATGGCCAAGAAGGTGC TCGAAGAGGAGTTTGCCCGCGAAATCGAGGAGCGCCGGATCGATCCGGTCAGCGTCCGCCGCAATCTTGCGATGGTGGCC GTGGTGGGCAATAAGATGTTGGGCCACCCCGGCGTGTCGGCACAGCTCTTCGAGACGCTCGGCAAGAACGGCGTCAACGT GATCGCCGTCGCGCAGGGGGCCAACGAAATGAACATTTCGCTGGTCATCGACAGCGCGGATGAGAACAAGGCGCTCAACT GCGTCCACGAATCCTTCTTCCTTTCGATGCGCAAGGTGCACGTTTTCATCGTGGGTACCGGCACCATCGCCAAAAGTCTC ATCAGCCAGATCCGGCGGCATCGCGCCACCCTGCAGAAAGAATTGGGCCTTGACGTTGTGGTTGCGGGTCTGGCCAACAC CCGCTCGATGTGCATCGAGCCTGCCGGAATCGATCTCGAACACTGGCACGATTCGCTGAAGCCGCGCGAGTCGCACGAGG GGATCGGGCAGTATATCCGTCTGATTCAGGAACGGAACCTGCACAACACCATCGTTGTGGACTGTACGGCGAGCAGGCAG GTGGCCGAGTGCTACCCCGCGCTGCTCCGGGCGAATATCTCTGTTGCCACGGCCAACAAACTTGGCATGGCTGGGCCGTG GGATCTGTATCGCAAGATCATGGATGCGTTACGCTCCAGTAATGCGAAGTTCCTCTACGAAACCAATGTTGGGGCGGGTT TGCCGGTGATCAACACGCTTAACGACCTGAAGAACAGCGGAGACAAGATCGTCTGCATCGAGGGCGTTTTGTCGGGTACA CTAAGCTTCATTTTCAACGAGCTGCGCAAGGGCGGGCGTTTCAGCGAGATCGTTCGCAAAGCCAAGGAGTCTGGCTACAC CGAGCCCGATCCGCGCGATGATCTCTCCGGAGCCGATTTCGCCCGGAAGCTGCTTATTCTCGGTAGGGAGCTTGGCTATC AGCTCGAGTACGCGGACGTGGAGTGCCAGAGCCTCGTCCCGGAGCCGCTGCGAGGCGAAATGTCGCCCGCCGAGTTTCTC GACCAGCTCTCTTCAATCGACGACTGGTACGTCGATGAGATGGCGAGTGCCGCGAGCGAGGGGATGACCATCGCCTACAC CGGCGAGCTTCGGGACGGCAAGGCGAAGGTGGGGCTGAAGCGCGTGCCGCTCGAAAGCCCGGTGGCCGGGCTGAACGGCT CGGAGAACCTCGTGGTTTTCACGACCGAGCGCTACCTCAAGACCCCGCTGGTGGTCAAGGGGCCTGGCGCTGGCGGCGAG GTGACAGCAGGCGGCGTCTTCGCCGACATTCTCCGCATCGCAAGCTATTTGGTCTGA
Upstream 100 bases:
>100_bases CAAAACTTCTGGAAAAAGAGCATTTCCCGGTTTGTTTTATTGCCCTGCTCGTAAGAAATTACAAAGACAAGTTTAATCGT GTAATGCAGCAAGGTTGAAG
Downstream 100 bases:
>100_bases GTCGCCGGCATGAAAGCAATCATCATCTCTATCGGCGACGAGTTGCTCAAGGGGCACCGGGTCAACACCAACGCGCCCTT TATCGCTCGTGAACTCGGCA
Product: bifunctional aspartokinase I/homeserine dehydrogenase I
Products: NA
Alternate protein names: Aspartokinase I/homoserine dehydrogenase I; AKI-HDI; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 818; Mature: 818
Protein sequence:
>818_residues MRVFKFGGSSIASAAKISNVAGIIRRELKSTPLVVVVSAIGKVTDMLAETAALAGNGDAAYRDKLEGIASLHGGIIRELF GTEASAEETWLGEMMAELNDVLHGVFLLRELSDKSLALVLSYGERLSCRIVSRYMHVSGTPAECVDARSVIVTDDNHCFA KVDRLATGKLIHERFRSFDVLPVVTGFIASAPDGSVTNLGRGGSDFTATILGAALHAEEVWIWTDVDGFYSADPKRVPDA RVIPEISYAEAMELSHAGAKVLHPLAVQPVMKAGIPLRIKNSFNPEKPGTRIGIEAAGAEALPGTVTGLTSINHVVLLSL SGSGMAGVPGTASRLFTCLARHSINIIFISQASSEQSISLAIAPGQASMAKKVLEEEFAREIEERRIDPVSVRRNLAMVA VVGNKMLGHPGVSAQLFETLGKNGVNVIAVAQGANEMNISLVIDSADENKALNCVHESFFLSMRKVHVFIVGTGTIAKSL ISQIRRHRATLQKELGLDVVVAGLANTRSMCIEPAGIDLEHWHDSLKPRESHEGIGQYIRLIQERNLHNTIVVDCTASRQ VAECYPALLRANISVATANKLGMAGPWDLYRKIMDALRSSNAKFLYETNVGAGLPVINTLNDLKNSGDKIVCIEGVLSGT LSFIFNELRKGGRFSEIVRKAKESGYTEPDPRDDLSGADFARKLLILGRELGYQLEYADVECQSLVPEPLRGEMSPAEFL DQLSSIDDWYVDEMASAASEGMTIAYTGELRDGKAKVGLKRVPLESPVAGLNGSENLVVFTTERYLKTPLVVKGPGAGGE VTAGGVFADILRIASYLV
Sequences:
>Translated_818_residues MRVFKFGGSSIASAAKISNVAGIIRRELKSTPLVVVVSAIGKVTDMLAETAALAGNGDAAYRDKLEGIASLHGGIIRELF GTEASAEETWLGEMMAELNDVLHGVFLLRELSDKSLALVLSYGERLSCRIVSRYMHVSGTPAECVDARSVIVTDDNHCFA KVDRLATGKLIHERFRSFDVLPVVTGFIASAPDGSVTNLGRGGSDFTATILGAALHAEEVWIWTDVDGFYSADPKRVPDA RVIPEISYAEAMELSHAGAKVLHPLAVQPVMKAGIPLRIKNSFNPEKPGTRIGIEAAGAEALPGTVTGLTSINHVVLLSL SGSGMAGVPGTASRLFTCLARHSINIIFISQASSEQSISLAIAPGQASMAKKVLEEEFAREIEERRIDPVSVRRNLAMVA VVGNKMLGHPGVSAQLFETLGKNGVNVIAVAQGANEMNISLVIDSADENKALNCVHESFFLSMRKVHVFIVGTGTIAKSL ISQIRRHRATLQKELGLDVVVAGLANTRSMCIEPAGIDLEHWHDSLKPRESHEGIGQYIRLIQERNLHNTIVVDCTASRQ VAECYPALLRANISVATANKLGMAGPWDLYRKIMDALRSSNAKFLYETNVGAGLPVINTLNDLKNSGDKIVCIEGVLSGT LSFIFNELRKGGRFSEIVRKAKESGYTEPDPRDDLSGADFARKLLILGRELGYQLEYADVECQSLVPEPLRGEMSPAEFL DQLSSIDDWYVDEMASAASEGMTIAYTGELRDGKAKVGLKRVPLESPVAGLNGSENLVVFTTERYLKTPLVVKGPGAGGE VTAGGVFADILRIASYLV >Mature_818_residues MRVFKFGGSSIASAAKISNVAGIIRRELKSTPLVVVVSAIGKVTDMLAETAALAGNGDAAYRDKLEGIASLHGGIIRELF GTEASAEETWLGEMMAELNDVLHGVFLLRELSDKSLALVLSYGERLSCRIVSRYMHVSGTPAECVDARSVIVTDDNHCFA KVDRLATGKLIHERFRSFDVLPVVTGFIASAPDGSVTNLGRGGSDFTATILGAALHAEEVWIWTDVDGFYSADPKRVPDA RVIPEISYAEAMELSHAGAKVLHPLAVQPVMKAGIPLRIKNSFNPEKPGTRIGIEAAGAEALPGTVTGLTSINHVVLLSL SGSGMAGVPGTASRLFTCLARHSINIIFISQASSEQSISLAIAPGQASMAKKVLEEEFAREIEERRIDPVSVRRNLAMVA VVGNKMLGHPGVSAQLFETLGKNGVNVIAVAQGANEMNISLVIDSADENKALNCVHESFFLSMRKVHVFIVGTGTIAKSL ISQIRRHRATLQKELGLDVVVAGLANTRSMCIEPAGIDLEHWHDSLKPRESHEGIGQYIRLIQERNLHNTIVVDCTASRQ VAECYPALLRANISVATANKLGMAGPWDLYRKIMDALRSSNAKFLYETNVGAGLPVINTLNDLKNSGDKIVCIEGVLSGT LSFIFNELRKGGRFSEIVRKAKESGYTEPDPRDDLSGADFARKLLILGRELGYQLEYADVECQSLVPEPLRGEMSPAEFL DQLSSIDDWYVDEMASAASEGMTIAYTGELRDGKAKVGLKRVPLESPVAGLNGSENLVVFTTERYLKTPLVVKGPGAGGE VTAGGVFADILRIASYLV
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=820, Percent_Identity=37.4390243902439, Blast_Score=555, Evalue=1e-159, Organism=Escherichia coli, GI1790376, Length=828, Percent_Identity=30.6763285024155, Blast_Score=338, Evalue=1e-93, Organism=Escherichia coli, GI1790455, Length=470, Percent_Identity=29.3617021276596, Blast_Score=145, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6320893, Length=497, Percent_Identity=29.5774647887324, Blast_Score=197, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6322599, Length=364, Percent_Identity=32.6923076923077, Blast_Score=168, Evalue=4e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 87916; Mature: 87916
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS01042 HOMOSER_DHGENASE ; PS00324 ASPARTOKINASE ; PS00178 AA_TRNA_LIGASE_I ; PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVFKFGGSSIASAAKISNVAGIIRRELKSTPLVVVVSAIGKVTDMLAETAALAGNGDAA CEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHH YRDKLEGIASLHGGIIRELFGTEASAEETWLGEMMAELNDVLHGVFLLRELSDKSLALVL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE SYGERLSCRIVSRYMHVSGTPAECVDARSVIVTDDNHCFAKVDRLATGKLIHERFRSFDV ECCCCHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCH LPVVTGFIASAPDGSVTNLGRGGSDFTATILGAALHAEEVWIWTDVDGFYSADPKRVPDA HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCC RVIPEISYAEAMELSHAGAKVLHPLAVQPVMKAGIPLRIKNSFNPEKPGTRIGIEAAGAE CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEECCCC ALPGTVTGLTSINHVVLLSLSGSGMAGVPGTASRLFTCLARHSINIIFISQASSEQSISL CCCCCHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEE AIAPGQASMAKKVLEEEFAREIEERRIDPVSVRRNLAMVAVVGNKMLGHPGVSAQLFETL EECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEECCHHCCCCCCHHHHHHHH GKNGVNVIAVAQGANEMNISLVIDSADENKALNCVHESFFLSMRKVHVFIVGTGTIAKSL CCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHEEEEEEEEEEECHHHHHHH ISQIRRHRATLQKELGLDVVVAGLANTRSMCIEPAGIDLEHWHDSLKPRESHEGIGQYIR HHHHHHHHHHHHHHCCCCEEEECCCCCCHHEECCCCCCHHHHHHCCCCCHHHHHHHHHHH LIQERNLHNTIVVDCTASRQVAECYPALLRANISVATANKLGMAGPWDLYRKIMDALRSS HHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHCC NAKFLYETNVGAGLPVINTLNDLKNSGDKIVCIEGVLSGTLSFIFNELRKGGRFSEIVRK CCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHH AKESGYTEPDPRDDLSGADFARKLLILGRELGYQLEYADVECQSLVPEPLRGEMSPAEFL HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHCCCCCCCCCCCHHHHH DQLSSIDDWYVDEMASAASEGMTIAYTGELRDGKAKVGLKRVPLESPVAGLNGSENLVVF HHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHCCEEECCCCCCCCCCCCCCCEEEE TTERYLKTPLVVKGPGAGGEVTAGGVFADILRIASYLV EEHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRVFKFGGSSIASAAKISNVAGIIRRELKSTPLVVVVSAIGKVTDMLAETAALAGNGDAA CEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCHH YRDKLEGIASLHGGIIRELFGTEASAEETWLGEMMAELNDVLHGVFLLRELSDKSLALVL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE SYGERLSCRIVSRYMHVSGTPAECVDARSVIVTDDNHCFAKVDRLATGKLIHERFRSFDV ECCCCHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCH LPVVTGFIASAPDGSVTNLGRGGSDFTATILGAALHAEEVWIWTDVDGFYSADPKRVPDA HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCC RVIPEISYAEAMELSHAGAKVLHPLAVQPVMKAGIPLRIKNSFNPEKPGTRIGIEAAGAE CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEECCCC ALPGTVTGLTSINHVVLLSLSGSGMAGVPGTASRLFTCLARHSINIIFISQASSEQSISL CCCCCHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEE AIAPGQASMAKKVLEEEFAREIEERRIDPVSVRRNLAMVAVVGNKMLGHPGVSAQLFETL EECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEECCHHCCCCCCHHHHHHHH GKNGVNVIAVAQGANEMNISLVIDSADENKALNCVHESFFLSMRKVHVFIVGTGTIAKSL CCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHEEEEEEEEEEECHHHHHHH ISQIRRHRATLQKELGLDVVVAGLANTRSMCIEPAGIDLEHWHDSLKPRESHEGIGQYIR HHHHHHHHHHHHHHCCCCEEEECCCCCCHHEECCCCCCHHHHHHCCCCCHHHHHHHHHHH LIQERNLHNTIVVDCTASRQVAECYPALLRANISVATANKLGMAGPWDLYRKIMDALRSS HHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHCC NAKFLYETNVGAGLPVINTLNDLKNSGDKIVCIEGVLSGTLSFIFNELRKGGRFSEIVRK CCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHH AKESGYTEPDPRDDLSGADFARKLLILGRELGYQLEYADVECQSLVPEPLRGEMSPAEFL HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHCCCCCCCCCCCHHHHH DQLSSIDDWYVDEMASAASEGMTIAYTGELRDGKAKVGLKRVPLESPVAGLNGSENLVVF HHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHCCEEECCCCCCCCCCCCCCCEEEE TTERYLKTPLVVKGPGAGGEVTAGGVFADILRIASYLV EEHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7003595; 1630901; 7610040; 9278503; 6277952; 2410621; 387092; 6298218; 390305 [H]