Click here to switch to the map view.

The map label for this gene is ygaD [C]

Identifier: 21674839

GI number: 21674839

Start: 1925774

End: 1927045

Strand: Reverse

Name: ygaD [C]

Synonym: CT2029

Alternate gene names: 21674839

Gene position: 1927045-1925774 (Counterclockwise)

Preceding gene: 21674840

Following gene: 21674838

Centisome position: 89.42

GC content: 63.05

Gene sequence:

>1272_bases
ATGAAAGCAATCATCATCTCTATCGGCGACGAGTTGCTCAAGGGGCACCGGGTCAACACCAACGCGCCCTTTATCGCTCG
TGAACTCGGCAACATCGGTATTCCCGTGACCCGCATCATTACCTGTTCGGATGATCCGCAGGCGATCCGTGATTCGGTGA
CGTTGGCGCTCACGGAGGCCGAGGCGGTGTTCGTGACTGGCGGCCTTGGCCCAACCAACGACGACCGGACGCGTGACGCA
GTTCGGGCGCTGCTTGGACGCGGGCTGGCGCTTGACGAACCGTCGTTCGAGCGCATCGCTGATTACTTCCGCCGCCGCAA
TCGCCCCGTGACCGAGGTGATGAAAGATCAGGCGATGGTGATCGAAGGTTCGATTGCGATTCCGAACACGAAGGGCACCG
CTCCCGGCATGATTATCGAGTGCGCCCCGCGCTTCGCCGGTCGCCATCTGGTGCTCATGCCTGGCGTGCCCGCCGAGATG
GAGGCGATGATGCGTTTGACGGTTGTGCCGTTCTTTGCGCCGCTCTCCGGAGCCTTTATCCGCCACACCCCCGTCATGAC
GATGGGCATCGGTGAAACGCAGCTCGCGGACATGATCGTGGAGGTCGAGGACTCGCTGCCGTCGGGCACAACCCTCGCCT
ACCTGCCGCACGCCGCCGGCGTTAGCCTCATGGTCAGCACGTCGGGTGCCCGTCGCGAGGATGTCGATGCGGAGAACCGC
CGCGTGGTCGAAGCCATCGTGGCGAAAGCGGGCCGCTTTGTTTACGCGACCTCGGAGGTGACGCTCGAAGAGGTGGTTGT
GAATCTCTTGCTCGAAAGGAAGCTCACGGTGGCTGTTGCCGAGTCCTGCACTGGCGGGCTGCTTGGGAGTCGCCTGACCG
ACGTGCCCGGATCGTCAGGCTGCTTTCTCGAAGGCTTGGTCACCTATAGCAACCAGGCGAAGGTGCGGTTGCTCGGCGTT
GATCCGGCCACCATCGAAGCGCACGGCGCGGTCAGTGAGCCTGTCGCCAAGGAGATGGCGCGCGGCTGCCTCGAACGGAG
CGGCGCAGACATTTCCGTTTCCACCACTGGCATCGCCGGGCCGGGTGGCGGAACGCCGGAAAAGCCGGTCGGCACGGTCT
GCGTCGGCATCGCCTCGAAGTTGCCTGACGGCGCGGTTCGGGTAGAGGCTGCCCGCTTCGTTATGCACGGAGATCGTCAT
CAGAACAAAATCCGCTTCAGCGAAGCCGCCCTTCGGGGACTTCTGGTTCGTCTGAAAGAGATGGAGTTTTGA

Upstream 100 bases:

>100_bases
GCTGGTGGTCAAGGGGCCTGGCGCTGGCGGCGAGGTGACAGCAGGCGGCGTCTTCGCCGACATTCTCCGCATCGCAAGCT
ATTTGGTCTGAGTCGCCGGC

Downstream 100 bases:

>100_bases
TATTTTTCAGCGACGCTTTCAAAAGCTTCCGGAATATGCCACATTTGTCGAATGATACTTATGACCTGGGAGTGCCCCGA
ACGAGACTGGATTCATTGAA

Product: competence/damage-inducible protein CinA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKAIIISIGDELLKGHRVNTNAPFIARELGNIGIPVTRIITCSDDPQAIRDSVTLALTEAEAVFVTGGLGPTNDDRTRDA
VRALLGRGLALDEPSFERIADYFRRRNRPVTEVMKDQAMVIEGSIAIPNTKGTAPGMIIECAPRFAGRHLVLMPGVPAEM
EAMMRLTVVPFFAPLSGAFIRHTPVMTMGIGETQLADMIVEVEDSLPSGTTLAYLPHAAGVSLMVSTSGARREDVDAENR
RVVEAIVAKAGRFVYATSEVTLEEVVVNLLLERKLTVAVAESCTGGLLGSRLTDVPGSSGCFLEGLVTYSNQAKVRLLGV
DPATIEAHGAVSEPVAKEMARGCLERSGADISVSTTGIAGPGGGTPEKPVGTVCVGIASKLPDGAVRVEAARFVMHGDRH
QNKIRFSEAALRGLLVRLKEMEF

Sequences:

>Translated_423_residues
MKAIIISIGDELLKGHRVNTNAPFIARELGNIGIPVTRIITCSDDPQAIRDSVTLALTEAEAVFVTGGLGPTNDDRTRDA
VRALLGRGLALDEPSFERIADYFRRRNRPVTEVMKDQAMVIEGSIAIPNTKGTAPGMIIECAPRFAGRHLVLMPGVPAEM
EAMMRLTVVPFFAPLSGAFIRHTPVMTMGIGETQLADMIVEVEDSLPSGTTLAYLPHAAGVSLMVSTSGARREDVDAENR
RVVEAIVAKAGRFVYATSEVTLEEVVVNLLLERKLTVAVAESCTGGLLGSRLTDVPGSSGCFLEGLVTYSNQAKVRLLGV
DPATIEAHGAVSEPVAKEMARGCLERSGADISVSTTGIAGPGGGTPEKPVGTVCVGIASKLPDGAVRVEAARFVMHGDRH
QNKIRFSEAALRGLLVRLKEMEF
>Mature_423_residues
MKAIIISIGDELLKGHRVNTNAPFIARELGNIGIPVTRIITCSDDPQAIRDSVTLALTEAEAVFVTGGLGPTNDDRTRDA
VRALLGRGLALDEPSFERIADYFRRRNRPVTEVMKDQAMVIEGSIAIPNTKGTAPGMIIECAPRFAGRHLVLMPGVPAEM
EAMMRLTVVPFFAPLSGAFIRHTPVMTMGIGETQLADMIVEVEDSLPSGTTLAYLPHAAGVSLMVSTSGARREDVDAENR
RVVEAIVAKAGRFVYATSEVTLEEVVVNLLLERKLTVAVAESCTGGLLGSRLTDVPGSSGCFLEGLVTYSNQAKVRLLGV
DPATIEAHGAVSEPVAKEMARGCLERSGADISVSTTGIAGPGGGTPEKPVGTVCVGIASKLPDGAVRVEAARFVMHGDRH
QNKIRFSEAALRGLLVRLKEMEF

Specific function: Unknown

COG id: COG1058

COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family

Homologues:

Organism=Escherichia coli, GI1789052, Length=157, Percent_Identity=45.859872611465, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1788583, Length=302, Percent_Identity=28.1456953642384, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1787818, Length=104, Percent_Identity=44.2307692307692, Blast_Score=90, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6323832, Length=246, Percent_Identity=24.390243902439, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CINAL_CHLTE (Q8KAX2)

Other databases:

- EMBL:   AE006470
- RefSeq:   NP_662904.1
- ProteinModelPortal:   Q8KAX2
- SMR:   Q8KAX2
- GeneID:   1007531
- GenomeReviews:   AE006470_GR
- KEGG:   cte:CT2029
- NMPDR:   fig|194439.1.peg.1998
- TIGR:   CT2029
- HOGENOM:   HBG449871
- OMA:   NPTVAPY
- ProtClustDB:   CLSK638050
- BioCyc:   CTEP194439:CT_2029-MONOMER
- HAMAP:   MF_00226_B
- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453
- Gene3D:   G3DSA:3.40.980.10
- PIRSF:   PIRSF006728
- SMART:   SM00852
- TIGRFAMs:   TIGR00199
- TIGRFAMs:   TIGR00200

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth; SSF53218 MoCF_biosynth

EC number: NA

Molecular weight: Translated: 44980; Mature: 44980

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIIISIGDELLKGHRVNTNAPFIARELGNIGIPVTRIITCSDDPQAIRDSVTLALTEA
CCEEEEECCHHHHCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCHHHHHCCEEEEEEEC
EAVFVTGGLGPTNDDRTRDAVRALLGRGLALDEPSFERIADYFRRRNRPVTEVMKDQAMV
CEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCEEE
IEGSIAIPNTKGTAPGMIIECAPRFAGRHLVLMPGVPAEMEAMMRLTVVPFFAPLSGAFI
EECCEECCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEE
RHTPVMTMGIGETQLADMIVEVEDSLPSGTTLAYLPHAAGVSLMVSTSGARREDVDAENR
ECCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCHHH
RVVEAIVAKAGRFVYATSEVTLEEVVVNLLLERKLTVAVAESCTGGLLGSRLTDVPGSSG
HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHEEEHHHCCCCHHCCHHCCCCCCCC
CFLEGLVTYSNQAKVRLLGVDPATIEAHGAVSEPVAKEMARGCLERSGADISVSTTGIAG
CEEEEEEEECCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCC
PGGGTPEKPVGTVCVGIASKLPDGAVRVEAARFVMHGDRHQNKIRFSEAALRGLLVRLKE
CCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
MEF
CCC
>Mature Secondary Structure
MKAIIISIGDELLKGHRVNTNAPFIARELGNIGIPVTRIITCSDDPQAIRDSVTLALTEA
CCEEEEECCHHHHCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCHHHHHCCEEEEEEEC
EAVFVTGGLGPTNDDRTRDAVRALLGRGLALDEPSFERIADYFRRRNRPVTEVMKDQAMV
CEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCEEE
IEGSIAIPNTKGTAPGMIIECAPRFAGRHLVLMPGVPAEMEAMMRLTVVPFFAPLSGAFI
EECCEECCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEE
RHTPVMTMGIGETQLADMIVEVEDSLPSGTTLAYLPHAAGVSLMVSTSGARREDVDAENR
ECCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCHHH
RVVEAIVAKAGRFVYATSEVTLEEVVVNLLLERKLTVAVAESCTGGLLGSRLTDVPGSSG
HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHEEEHHHCCCCHHCCHHCCCCCCCC
CFLEGLVTYSNQAKVRLLGVDPATIEAHGAVSEPVAKEMARGCLERSGADISVSTTGIAG
CEEEEEEEECCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCC
PGGGTPEKPVGTVCVGIASKLPDGAVRVEAARFVMHGDRHQNKIRFSEAALRGLLVRLKE
CCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
MEF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12093901