| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is gmhB
Identifier: 21674822
GI number: 21674822
Start: 1907246
End: 1907845
Strand: Reverse
Name: gmhB
Synonym: CT2011
Alternate gene names: 21674822
Gene position: 1907845-1907246 (Counterclockwise)
Preceding gene: 21674823
Following gene: 21674821
Centisome position: 88.53
GC content: 59.83
Gene sequence:
>600_bases ATGGAGTCTGCGAAGGTGCTTTTTCTTGACCGGGACGGAACGATCAACCGCGACATTGGCCGCTATGTTTCGAGCCGCGA GGAGTTCATCCTGATCGACCGCGCGGACGAGGCCATCGCGATTGCGCGCGAGGCGGGGTTCCGGATCGTGCTCATTACCA ACCAGGCGGGTATCGCCCGTGGCATCGTGACACCACAGGATGTCGAAGATGTCAACGACTATCTCAACGAACTGCTGGCG GAGCGCCAGACCTCTTTCGACCGCTGCTACTACTGCCCGGCGCATCCAAACTATCCACATCCCGAGTACGACCGCTTCAT CGATCACCGCAAACCCTCGCCCCGCATGGTGGAGCAGGCCATCGCCGACCTGCGCGAGGAGGGCTTCGAGGTGGATCGCA GCGCATCGTTTTTCATCGGCGACAAGCTCATTGATGTCGAGTGCGGCCAGCGGGCCGGGTTGAAAACGATACTCGTCAGA ACCGGCCACAACGAGGAGTCGCTCTGCGAGCAGCACCAGATTTTTCCGGATCATGTCGCCGACGATCTCTACCAGGCTGT CACCGGCTACATTTTGGGGCAGCCAACATCAAGGGACTGA
Upstream 100 bases:
>100_bases CGCGCTCATGCTCGAATGCATGGGGCGCGATTTTTCGTGGAGCACGTCGGCGGGGCAGTATGCCGAGCTCTACCGAAATC TGCTTGGCTGAGGTGGTGCG
Downstream 100 bases:
>100_bases AAGGACGAAAAGGACTTCAGGGACAGCAGGGTTTGGAGAATCGGTTTCGGGGTGTTGGAAAAATAATGAGAAAGGCGCCC GATGATTTGCCTGTATTTGC
Product: histidinol phosphatase-related protein, putative
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MESAKVLFLDRDGTINRDIGRYVSSREEFILIDRADEAIAIAREAGFRIVLITNQAGIARGIVTPQDVEDVNDYLNELLA ERQTSFDRCYYCPAHPNYPHPEYDRFIDHRKPSPRMVEQAIADLREEGFEVDRSASFFIGDKLIDVECGQRAGLKTILVR TGHNEESLCEQHQIFPDHVADDLYQAVTGYILGQPTSRD
Sequences:
>Translated_199_residues MESAKVLFLDRDGTINRDIGRYVSSREEFILIDRADEAIAIAREAGFRIVLITNQAGIARGIVTPQDVEDVNDYLNELLA ERQTSFDRCYYCPAHPNYPHPEYDRFIDHRKPSPRMVEQAIADLREEGFEVDRSASFFIGDKLIDVECGQRAGLKTILVR TGHNEESLCEQHQIFPDHVADDLYQAVTGYILGQPTSRD >Mature_199_residues MESAKVLFLDRDGTINRDIGRYVSSREEFILIDRADEAIAIAREAGFRIVLITNQAGIARGIVTPQDVEDVNDYLNELLA ERQTSFDRCYYCPAHPNYPHPEYDRFIDHRKPSPRMVEQAIADLREEGFEVDRSASFFIGDKLIDVECGQRAGLKTILVR TGHNEESLCEQHQIFPDHVADDLYQAVTGYILGQPTSRD
Specific function: Converts the D-glycero-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-D-manno-heptose 1-phosphate by removing the phosphate group at the C-7 position
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family
Homologues:
Organism=Escherichia coli, GI1786399, Length=162, Percent_Identity=39.5061728395062, Blast_Score=113, Evalue=8e-27, Organism=Escherichia coli, GI87082027, Length=164, Percent_Identity=26.219512195122, Blast_Score=61, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GMHB_CHLTE (Q8KAY7)
Other databases:
- EMBL: AE006470 - RefSeq: NP_662887.1 - ProteinModelPortal: Q8KAY7 - SMR: Q8KAY7 - GeneID: 1007550 - GenomeReviews: AE006470_GR - KEGG: cte:CT2011 - NMPDR: fig|194439.1.peg.1981 - TIGR: CT2011 - HOGENOM: HBG613347 - OMA: RAGCRTV - ProtClustDB: CLSK638039 - BioCyc: CTEP194439:CT_2011-MONOMER - GO: GO:0005737 - InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR006543 - InterPro: IPR013954 - Gene3D: G3DSA:3.40.50.1000 - TIGRFAMs: TIGR01662 - TIGRFAMs: TIGR01656
Pfam domain/function: PF08645 PNK3P; SSF56784 SSF56784
EC number: NA
Molecular weight: Translated: 22676; Mature: 22676
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESAKVLFLDRDGTINRDIGRYVSSREEFILIDRADEAIAIAREAGFRIVLITNQAGIAR CCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHCCCEEEEEEECCCCCCC GIVTPQDVEDVNDYLNELLAERQTSFDRCYYCPAHPNYPHPEYDRFIDHRKPSPRMVEQA CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHH IADLREEGFEVDRSASFFIGDKLIDVECGQRAGLKTILVRTGHNEESLCEQHQIFPDHVA HHHHHHHCCCCCCCCEEEECCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHH DDLYQAVTGYILGQPTSRD HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MESAKVLFLDRDGTINRDIGRYVSSREEFILIDRADEAIAIAREAGFRIVLITNQAGIAR CCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCHHHHHHCCCEEEEEEECCCCCCC GIVTPQDVEDVNDYLNELLAERQTSFDRCYYCPAHPNYPHPEYDRFIDHRKPSPRMVEQA CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHH IADLREEGFEVDRSASFFIGDKLIDVECGQRAGLKTILVRTGHNEESLCEQHQIFPDHVA HHHHHHHCCCCCCCCEEEECCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHH DDLYQAVTGYILGQPTSRD HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901