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The map label for this gene is ydiK [C]

Identifier: 21674815

GI number: 21674815

Start: 1898885

End: 1899985

Strand: Reverse

Name: ydiK [C]

Synonym: CT2004

Alternate gene names: 21674815

Gene position: 1899985-1898885 (Counterclockwise)

Preceding gene: 21674816

Following gene: 21674814

Centisome position: 88.17

GC content: 54.68

Gene sequence:

>1101_bases
ATGAACACACCGCAATTCAACAAGATCGCCGTGCTTGTCGCGACGCTCCTGATCTCTGCGCTCTTTCTGACGATGATCAG
GCAGTTTCTGGTGACGATTCTGCTGGCCGGAATTTTTACCGGGCTGGCCTATCCGCTTTTCAGCCGGTTTATTACGCTGA
CCCGGGGCCACCGGAGCCTGAGCGCTTCGATGACCCTCGTCATCTTTTTCATGATGGTTTTTCTCCCGCTGCTGGCAGTG
TTTACCGTGGTGATTCTGCAAGCGGTTTCCCTGAGCAGCACGGCCATTCCGCTGATTCGCGAACAGCTTCGCGATCCGGA
AGGGTTCCTGCGGATGCTCTCCAGCCTGCCTTTTTACAAGGATATCGAGAGCTATAGCGACCTGATTCTTGAAAAAGCCG
CCGAAATTCTCGGCAATCTCGGTTCATCGGTTCTCAGCAGTTTTTCGGCGATCACCTGGACGGCGATCTATGATCTTGTG
CTTTTTATCATTTTCTGGTACACCATGTTTTTTTTGCTCAGGGACGGGCATGAGCTTCTGGAGCGCATCAAGTATTACCT
TCCCCTGAACGAGAGTGATCAGAGGCGCCTGTTCGACCGTTTCGTGTCGGTTACAAGAGCCTCGCTGAAAGGCTCACTCA
TCATCGCCGTTATTCAGGGCACTCTGGCCGGTCTTGCTTTTTATGTGGCCGGGATCAACCAGGCGGTGTTTTGGGGAGCG
ATCATGGCGATGCTGTCGCTGTTGCCGCTCATCGGTTCGCCCATTATCTGGGTTCCGGCAGTCATTATCCTGGCTTTGTC
GGGCAACTATGCGCAGGCGATTGGCCTTTTTCTTTTTTGCAGCATCATCGTTGGCCAGATCGACAATGTGCTCCGTCCGA
TTCTGGTTGGGCGTGACACCAGTATGCACGAGCTGTTCATTTTTTTCGGCACGCTAGGCGGCATCGGCATGTTCGGTCTG
CCCGGCTTCATTATCGGTCCGGTTGTGGCAGCGCTCTTTGTGACGGTGTGGGATATTTACGGCGAGACCTTCAACGAGTC
GCTGATCGAACGGCGTTCGGGCGGAGGGCAGGCGGCGGGAAGCGATGGATCGGCACCCTGA

Upstream 100 bases:

>100_bases
AGGCCCGTTGCGGTCGAATCACTTTTTGCAGTGATGCGGCGAGCAGGTTAAATTGAGGGAGCTTTTGCAACGATGGATGC
CCCTTATTGCCATGGTACGG

Downstream 100 bases:

>100_bases
GATTGTGACAAGGGAGCGTGTGAATAAAACGAAAAAGAGCGGCCCGATGATGAATTCAGGCCGCTCTTTTTTTATGAAGT
CCGGTCAGTCCTGATTCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MNTPQFNKIAVLVATLLISALFLTMIRQFLVTILLAGIFTGLAYPLFSRFITLTRGHRSLSASMTLVIFFMMVFLPLLAV
FTVVILQAVSLSSTAIPLIREQLRDPEGFLRMLSSLPFYKDIESYSDLILEKAAEILGNLGSSVLSSFSAITWTAIYDLV
LFIIFWYTMFFLLRDGHELLERIKYYLPLNESDQRRLFDRFVSVTRASLKGSLIIAVIQGTLAGLAFYVAGINQAVFWGA
IMAMLSLLPLIGSPIIWVPAVIILALSGNYAQAIGLFLFCSIIVGQIDNVLRPILVGRDTSMHELFIFFGTLGGIGMFGL
PGFIIGPVVAALFVTVWDIYGETFNESLIERRSGGGQAAGSDGSAP

Sequences:

>Translated_366_residues
MNTPQFNKIAVLVATLLISALFLTMIRQFLVTILLAGIFTGLAYPLFSRFITLTRGHRSLSASMTLVIFFMMVFLPLLAV
FTVVILQAVSLSSTAIPLIREQLRDPEGFLRMLSSLPFYKDIESYSDLILEKAAEILGNLGSSVLSSFSAITWTAIYDLV
LFIIFWYTMFFLLRDGHELLERIKYYLPLNESDQRRLFDRFVSVTRASLKGSLIIAVIQGTLAGLAFYVAGINQAVFWGA
IMAMLSLLPLIGSPIIWVPAVIILALSGNYAQAIGLFLFCSIIVGQIDNVLRPILVGRDTSMHELFIFFGTLGGIGMFGL
PGFIIGPVVAALFVTVWDIYGETFNESLIERRSGGGQAAGSDGSAP
>Mature_366_residues
MNTPQFNKIAVLVATLLISALFLTMIRQFLVTILLAGIFTGLAYPLFSRFITLTRGHRSLSASMTLVIFFMMVFLPLLAV
FTVVILQAVSLSSTAIPLIREQLRDPEGFLRMLSSLPFYKDIESYSDLILEKAAEILGNLGSSVLSSFSAITWTAIYDLV
LFIIFWYTMFFLLRDGHELLERIKYYLPLNESDQRRLFDRFVSVTRASLKGSLIIAVIQGTLAGLAFYVAGINQAVFWGA
IMAMLSLLPLIGSPIIWVPAVIILALSGNYAQAIGLFLFCSIIVGQIDNVLRPILVGRDTSMHELFIFFGTLGGIGMFGL
PGFIIGPVVAALFVTVWDIYGETFNESLIERRSGGGQAAGSDGSAP

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=358, Percent_Identity=23.7430167597765, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40225; Mature: 40225

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPQFNKIAVLVATLLISALFLTMIRQFLVTILLAGIFTGLAYPLFSRFITLTRGHRSL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
SASMTLVIFFMMVFLPLLAVFTVVILQAVSLSSTAIPLIREQLRDPEGFLRMLSSLPFYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCHH
DIESYSDLILEKAAEILGNLGSSVLSSFSAITWTAIYDLVLFIIFWYTMFFLLRDGHELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
ERIKYYLPLNESDQRRLFDRFVSVTRASLKGSLIIAVIQGTLAGLAFYVAGINQAVFWGA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMAMLSLLPLIGSPIIWVPAVIILALSGNYAQAIGLFLFCSIIVGQIDNVLRPILVGRDT
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SMHELFIFFGTLGGIGMFGLPGFIIGPVVAALFVTVWDIYGETFNESLIERRSGGGQAAG
HHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SDGSAP
CCCCCC
>Mature Secondary Structure
MNTPQFNKIAVLVATLLISALFLTMIRQFLVTILLAGIFTGLAYPLFSRFITLTRGHRSL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
SASMTLVIFFMMVFLPLLAVFTVVILQAVSLSSTAIPLIREQLRDPEGFLRMLSSLPFYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCHH
DIESYSDLILEKAAEILGNLGSSVLSSFSAITWTAIYDLVLFIIFWYTMFFLLRDGHELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
ERIKYYLPLNESDQRRLFDRFVSVTRASLKGSLIIAVIQGTLAGLAFYVAGINQAVFWGA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMAMLSLLPLIGSPIIWVPAVIILALSGNYAQAIGLFLFCSIIVGQIDNVLRPILVGRDT
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SMHELFIFFGTLGGIGMFGLPGFIIGPVVAALFVTVWDIYGETFNESLIERRSGGGQAAG
HHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SDGSAP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]