| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is 21674792
Identifier: 21674792
GI number: 21674792
Start: 1879883
End: 1881130
Strand: Reverse
Name: 21674792
Synonym: CT1981
Alternate gene names: NA
Gene position: 1881130-1879883 (Counterclockwise)
Preceding gene: 21674794
Following gene: 21674790
Centisome position: 87.29
GC content: 58.17
Gene sequence:
>1248_bases GTGTCAGAGCACCGGCTCGCCGGATTTGCCGGTATCGGCAACCATGACGGGACGGTCGGTGTTGAGCTGGTGCTGATAGG TTTGCACCCTGGCCAAGAAGCTGTGCAGCTCCGCGGGCGAAAGCGAGCGGCGCGGCGCGGTCTGCTTCAGCGCAACCAGC GGATTCTGCAAATGGCCATTTCTGACGATTCTGAAATCGAGGTGCGGCCCGGTCGAACGTCCGGTCGAGCCGATATAGCC GATAATGTCACCCTGTTTGACCCGCTTGCCGTAACGGCAGGAGGCTGCGTAACGGCTCAGGTGCATGTACATTGTATGCA GCCCGCCGCCATGCGCGATGGTGACCAGATTGCCAGCGTTGCCCTTGCGTCCGCGGAAAATGACGCGCCCGTCGGCCACG GCTCTGACCGGCGTGCCGACCGGCGCGGCCAGATCGACGCCGCCGTGGAACTGGTGCTGGCCGGTGACCGGGTTGATGCG GTAGCCGAAACCGCTCGAAATGCGGCGGTAGCTGCACGGCTTGATGAACATGGAGCGGCCCTGCATCATGGCGCGTCCGT TTTCATCGTAGTATGCCGTATCGCCTTTGGCATTGGTGAACTGATAGGCGTTGAAGCGCTGCCCTTTCGAGTTGATTTCG ATGGCGAGAATATCACCGGTTCCAACACAATGGTTCTCGTTCCACATTTCCTGGAACAGGATCCGGTAGGTTGCGCCGGG TTGAATATCTCTTCTGAAATTGAGTCGGGAGGAGAGAATTTTTCTGATCTTGGGGTTGAGCGAACCGCGGTTCCGGCTGC GCAGCTCACTCGACAGCGAGGAGCGGAGGGTACCCTCGATGGTGGCAACGCGGGTATCGTATTCGATGGTTTCGCTCTCG GCGCTCAGCTTGCCGGTTTGTTGATCCTTGACGAGATGAAGGACTTCGTACGGGCTCGATTGCATGGAAAAGCTGATGAA CGTTCCGTTTTTGCCTGTTTCGAGTTCATAGGTTTTTCCGGCCCTCAGCCCTTTGATGGCACGGTTGCCCTTGATTTGCG AGGTAAGTTCGTGGACTTCTGCTGGTGTCAGTCCGGCGGCGGTCAGAATGGTGTAGATCGATTCGCCCCGTTGGAGAATT TTCTTTTCGACGCGGTGGGCAGGATCGTTTTCGCCCTCGTCGAGTGTTACCTTGTCGGACTCGTTGTTCAAGCCAAGCTC GTCGTCACTCTTCAGGCCGAGGGATTTACCGAGCGCGTGAATTGGTGA
Upstream 100 bases:
>100_bases GCCGCTTGTCGAAGCCTTTCTGTACGTTCCCGACCGAAACAAAGAAACCCCCGAAATACCGATCAGCATTCCGGAGGCTT TTTGACAAAATGTCTCTGAA
Downstream 100 bases:
>100_bases GGCTGACCAGTGTCCGGATGGTGTTTGCCGGGATGTGGCGGAAAGGATGAGGCTGACAGAAAAGAAGAGGACAACGAGTA GCGCCGTCGATGAGGCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MSEHRLAGFAGIGNHDGTVGVELVLIGLHPGQEAVQLRGRKRAARRGLLQRNQRILQMAISDDSEIEVRPGRTSGRADIA DNVTLFDPLAVTAGGCVTAQVHVHCMQPAAMRDGDQIASVALASAENDAPVGHGSDRRADRRGQIDAAVELVLAGDRVDA VAETARNAAVAARLDEHGAALHHGASVFIVVCRIAFGIGELIGVEALPFRVDFDGENITGSNTMVLVPHFLEQDPVGCAG LNISSEIESGGENFSDLGVERTAVPAAQLTRQRGAEGTLDGGNAGIVFDGFALGAQLAGLLILDEMKDFVRARLHGKADE RSVFACFEFIGFSGPQPFDGTVALDLRGKFVDFCWCQSGGGQNGVDRFAPLENFLFDAVGRIVFALVECYLVGLVVQAKL VVTLQAEGFTERVNW
Sequences:
>Translated_415_residues MSEHRLAGFAGIGNHDGTVGVELVLIGLHPGQEAVQLRGRKRAARRGLLQRNQRILQMAISDDSEIEVRPGRTSGRADIA DNVTLFDPLAVTAGGCVTAQVHVHCMQPAAMRDGDQIASVALASAENDAPVGHGSDRRADRRGQIDAAVELVLAGDRVDA VAETARNAAVAARLDEHGAALHHGASVFIVVCRIAFGIGELIGVEALPFRVDFDGENITGSNTMVLVPHFLEQDPVGCAG LNISSEIESGGENFSDLGVERTAVPAAQLTRQRGAEGTLDGGNAGIVFDGFALGAQLAGLLILDEMKDFVRARLHGKADE RSVFACFEFIGFSGPQPFDGTVALDLRGKFVDFCWCQSGGGQNGVDRFAPLENFLFDAVGRIVFALVECYLVGLVVQAKL VVTLQAEGFTERVNW >Mature_414_residues SEHRLAGFAGIGNHDGTVGVELVLIGLHPGQEAVQLRGRKRAARRGLLQRNQRILQMAISDDSEIEVRPGRTSGRADIAD NVTLFDPLAVTAGGCVTAQVHVHCMQPAAMRDGDQIASVALASAENDAPVGHGSDRRADRRGQIDAAVELVLAGDRVDAV AETARNAAVAARLDEHGAALHHGASVFIVVCRIAFGIGELIGVEALPFRVDFDGENITGSNTMVLVPHFLEQDPVGCAGL NISSEIESGGENFSDLGVERTAVPAAQLTRQRGAEGTLDGGNAGIVFDGFALGAQLAGLLILDEMKDFVRARLHGKADER SVFACFEFIGFSGPQPFDGTVALDLRGKFVDFCWCQSGGGQNGVDRFAPLENFLFDAVGRIVFALVECYLVGLVVQAKLV VTLQAEGFTERVNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44034; Mature: 43903
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHRLAGFAGIGNHDGTVGVELVLIGLHPGQEAVQLRGRKRAARRGLLQRNQRILQMAI CCCCCCEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEHEE SDDSEIEVRPGRTSGRADIADNVTLFDPLAVTAGGCVTAQVHVHCMQPAAMRDGDQIASV CCCCEEEEECCCCCCCCCCCCCCEEECCHHHCCCCEEEEEEEEEEECCHHHCCCHHHHHH ALASAENDAPVGHGSDRRADRRGQIDAAVELVLAGDRVDAVAETARNAAVAARLDEHGAA HHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHEEHHHHCCCH LHHGASVFIVVCRIAFGIGELIGVEALPFRVDFDGENITGSNTMVLVPHFLEQDPVGCAG HHCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCEEEEECHHHCCCCCCEEC LNISSEIESGGENFSDLGVERTAVPAAQLTRQRGAEGTLDGGNAGIVFDGFALGAQLAGL CCCHHHHHCCCCCHHHCCCCHHCCCHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHH LILDEMKDFVRARLHGKADERSVFACFEFIGFSGPQPFDGTVALDLRGKFVDFCWCQSGG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEECCCC GQNGVDRFAPLENFLFDAVGRIVFALVECYLVGLVVQAKLVVTLQAEGFTERVNW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHCCCC >Mature Secondary Structure SEHRLAGFAGIGNHDGTVGVELVLIGLHPGQEAVQLRGRKRAARRGLLQRNQRILQMAI CCCCCEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEHEE SDDSEIEVRPGRTSGRADIADNVTLFDPLAVTAGGCVTAQVHVHCMQPAAMRDGDQIASV CCCCEEEEECCCCCCCCCCCCCCEEECCHHHCCCCEEEEEEEEEEECCHHHCCCHHHHHH ALASAENDAPVGHGSDRRADRRGQIDAAVELVLAGDRVDAVAETARNAAVAARLDEHGAA HHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHEEHHHHCCCH LHHGASVFIVVCRIAFGIGELIGVEALPFRVDFDGENITGSNTMVLVPHFLEQDPVGCAG HHCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCEEEEECHHHCCCCCCEEC LNISSEIESGGENFSDLGVERTAVPAAQLTRQRGAEGTLDGGNAGIVFDGFALGAQLAGL CCCHHHHHCCCCCHHHCCCCHHCCCHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHH LILDEMKDFVRARLHGKADERSVFACFEFIGFSGPQPFDGTVALDLRGKFVDFCWCQSGG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEECCCC GQNGVDRFAPLENFLFDAVGRIVFALVECYLVGLVVQAKLVVTLQAEGFTERVNW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA